MELO3C007318.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C007318.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 2128095 .. 2128548 (-)
RNA-Seq ExpressionMELO3C007318.jh1
SyntenyMELO3C007318.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAAACCCTTCACTTCCTCACAATATCTAACATTCTAAATCCTCCACTACTCATGGCCGGTCACAGAAGCGACTACATCACCGGCGCCGCCTACTCTCCCAGGGCTTCTGCCCGTCCCATTCCCAAGCGAGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCCTCTATCTTCTCACCCACCACTCGTCGGACCTAGACTACAAGGCGGCCAGCGGTGGCTCTCACACTGAACCGCCCGGCCCGACCCGGCTCACCCTTTTTTCCTTTTCTTTTTCCCCTTTTCATGAGTTTGATGATGGAAGAGAAGAAACGGCATGGAGAGATTGGAGAGTCTCGGAGCTGTTTTGGTCTCTTTTTGTAAAAACAATTTTTCTTTTTTCTTTTTTCTTTTTTCAATTAATGGGAAAAAAAAAGGGAGATTTCCTTCTCTATTTATGA

mRNA sequence

TCAAAACCCTTCACTTCCTCACAATATCTAACATTCTAAATCCTCCACTACTCATGGCCGGTCACAGAAGCGACTACATCACCGGCGCCGCCTACTCTCCCAGGGCTTCTGCCCGTCCCATTCCCAAGCGAGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCCTCTATCTTCTCACCCACCACTCGTCGGACCTAGACTACAAGGCGGCCAGCGGTGGCTCTCACACTGAACCGCCCGGCCCGACCCGGCTCACCCTTTTTTCCTTTTCTTTTTCCCCTTTTCATGAGTTTGATGATGGAAGAGAAGAAACGGCATGGAGAGATTGGAGAGTCTCGGAGCTGTTTTGGTCTCTTTTTGTAAAAACAATTTTTCTTTTTTCTTTTTTCTTTTTTCAATTAATGGGAAAAAAAAAGGGAGATTTCCTTCTCTATTTATGA

Coding sequence (CDS)

ATGGCCGGTCACAGAAGCGACTACATCACCGGCGCCGCCTACTCTCCCAGGGCTTCTGCCCGTCCCATTCCCAAGCGAGGACAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCCTCTATCTTCTCACCCACCACTCGTCGGACCTAG

Protein sequence

MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT
Homology
BLAST of MELO3C007318.jh1 vs. NCBI nr
Match: KAA0052718.1 (hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (265), Expect = 1.28e-28
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0

Query: 1  MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52
          MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 81

BLAST of MELO3C007318.jh1 vs. NCBI nr
Match: KGN49191.1 (hypothetical protein Csa_004352 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 1.32e-23
Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0

Query: 1  MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52
          MA  R+ YIT AAYSPRASARP PKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52

BLAST of MELO3C007318.jh1 vs. NCBI nr
Match: XP_022977341.1 (uncharacterized protein LOC111477692 [Cucurbita maxima])

HSP 1 Score: 87.0 bits (214), Expect = 4.28e-20
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query: 1   MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTR 50
           M G RSD I+GA YSPR+S RPIPKRGQVKLGIMVGLAH+VASIFSPTTR
Sbjct: 56  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 105

BLAST of MELO3C007318.jh1 vs. NCBI nr
Match: KAG2689810.1 (hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothetical protein I3842_09G159900 [Carya illinoinensis])

HSP 1 Score: 70.1 bits (170), Expect = 1.86e-14
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0

Query: 2  AGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTR 50
          AG RS  I G ++S R S RPIPKRGQVKLGI+VGLAH+VASIFSP  R
Sbjct: 3  AGARSGMINGGSFSGRFSGRPIPKRGQVKLGIVVGLAHSVASIFSPRRR 51

BLAST of MELO3C007318.jh1 vs. NCBI nr
Match: KAG6642713.1 (hypothetical protein CIPAW_09G159600 [Carya illinoinensis] >KAG6696673.1 hypothetical protein I3842_09G159800 [Carya illinoinensis])

HSP 1 Score: 67.8 bits (164), Expect = 1.53e-13
Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 0

Query: 2  AGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTR 50
          AG RS  I G ++S   S RPIPKRGQVKLGI+VGLAH+VASIFSP  R
Sbjct: 3  AGARSGMINGGSFSGSFSGRPIPKRGQVKLGIVVGLAHSVASIFSPRRR 51

BLAST of MELO3C007318.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UBX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003310 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 6.22e-29
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0

Query: 1  MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52
          MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 81

BLAST of MELO3C007318.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KN78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.38e-24
Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0

Query: 1  MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52
          MA  R+ YIT AAYSPRASARP PKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52

BLAST of MELO3C007318.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IJM3 (uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.07e-20
Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 0

Query: 1   MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTR 50
           M G RSD I+GA YSPR+S RPIPKRGQVKLGIMVGLAH+VASIFSPTTR
Sbjct: 56  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 105

BLAST of MELO3C007318.jh1 vs. ExPASy TrEMBL
Match: A0A5J5VQ30 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G172400v1 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 8.75e-14
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 1  MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRR 51
          MAG R + I G  YSPR + RPIP+RGQVK+ I++G+AH+ ASIFS ++RR
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

BLAST of MELO3C007318.jh1 vs. ExPASy TrEMBL
Match: A0A5D2UXY7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D05G178200v1 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 8.75e-14
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0

Query: 1  MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRR 51
          MAG R + I G  YSPR + RPIP+RGQVK+ I++G+AH+ ASIFS ++RR
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0052718.11.28e-28100.00hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa][more]
KGN49191.11.32e-2388.46hypothetical protein Csa_004352 [Cucumis sativus][more]
XP_022977341.14.28e-2084.00uncharacterized protein LOC111477692 [Cucurbita maxima][more]
KAG2689810.11.86e-1471.43hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothe... [more]
KAG6642713.11.53e-1369.39hypothetical protein CIPAW_09G159600 [Carya illinoinensis] >KAG6696673.1 hypothe... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UBX76.22e-29100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KN786.38e-2488.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1[more]
A0A6J1IJM32.07e-2084.00uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692... [more]
A0A5J5VQ308.75e-1458.82Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G172400v1 PE... [more]
A0A5D2UXY78.75e-1458.82Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D05G178200v1 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36615PROTEIN, PUTATIVE-RELATEDcoord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007318.jh1.t1MELO3C007318.jh1.t1mRNA