MC10g0373.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.AAAGATATGGCTGATCGACAACCAATGGATCAACAGCATCAACTTGATCCACAGTTGCAATCCCCGCAGTCACCGAGAGAGGACATGATTGCATATGTGATGGCCTTGGAAGCTGCTCTGCTTCCGTGCTTGCCTGCAAGAGAGTTACAAGCAATAGACCGATCTCCTCACCCTTCTCATCAAAGTCAGTGACTAATCCCTCTCCTGTGTTGCCTGAGTTTCACTAGATTGTGGAGAACATTGGGAACTAGTAATTGGGCTGGTTCCTTTTATATCATTAACATATTTTCTTGCTCTATCATATTCCTCCTTATGATATGATCTCTTGAATTGAATAAGTTGTGTAAAAGAGTTTTATGTGTATAATTGTGGTCAATAACAATATTGCATGAATAACTGGCCTATAGCTTCGGTCTTTGTTGGTGTTGCACTGATTTTCAAATTGGTTATTTGACAAATAAAATTAGAAATCAGAGAAACTCGTAGATCAACAAATAATAAATTGAGCCTCTTCCGAGTTTAGTGCCACTCATGTAGACTGTTCAGTGCCAATTGCTGTCTGCAGGTCTATGTGTTAAACATGCAAACCACGAAAAGTCATTCTTTAGTTTATTTTCCAAAGGAGCCAAAGGAGAGCTTTACTAGCATTTGTCTACAAAACTGTAGAGAGTGGTAAGTTGCCGCACTTCTAAGGAAGTGGTAACTGATGTAGTACTGAAACAAGGTGGGTTGAGATTTGGGCAGCATTTAGAGTGCATACCTTTTGTTTTAATTGAGAAAGGGCTTGGCGTTTCACTCTTTCTCATGGGGTTGTCATGGATTGTCGGCCATACAGATAAGGAAGTCCAAGGAACAATTGTCATTTTATGTTCTTTTAAGGAAGTTAGGGTCTTTAAAGTTCTGAAAAACTGATGTACAACTACAATCCAGATCTTAGTTTTTACCAAGCAGGCAGATGTCTTCAGTTTCTTCATAATATGTAGCATCATATGCATTTCTATGTTTATCAATGGATACTTTAGCAAGTGCTATCTGTTCTGTAGACAACTATAGAGGGACTGTCTCTTGGTATTGTTTCACTCAACCAATTCGTGCTTGTTTGGTTTGCTTTCATCTCTCAAGCACGACAGTTTGTGAAGCAACTTGCTTGACGGTAATTCTTCATGTAATAATCTATGCCTAAACTGTTGTTAATCAGCTCTCTTTCTGAAGCCCATGTTTCTCATCATGCTCTCCCCTATTGCATTTTACTATGGGTCTGCACCTCGACTAGCTGGATCTAATGACTGAACTTTAGTCTTTGATTTTGTTGCATTAAAATTATGTGGATGAGTGATTTTCATTAATTTGTTGTATGAAAATATGTGGATCGGAAGTGACATTTAGATCTAGAAGTAGCAAGACTGTCTGCAATCTGCAACTCTAAAGGCGTTCAATGTAGGACATTTGTAAACAGTGAGTTGAACCAATATTCCTCTGGCTGGGCATTTGTAAATAGTGAAAATGACACCCGATTTTGTTAATGTTTCAGTTGACGTGGAGAGACATGCTAGGGATTTTATGGAGGCAGCTAAAAAGCTTCAACTGTACTTCATTGGTTTACAACGTGAGGATCAACCAATCAAAGTGGAAACACTAAGAAAGGTAAGTTAATCAAGCACCGTCCTTTTCAGTTCAAAGAGGAGTGACTCTTGTGATAAATGTAGCACAATTCCTTTTTTAACATTCTGTGTTACTTTTCAGGAGATATCCGCCATTGAGGAGGAACTAAAATTAAAGAATGACATTATCAAGAAGCATGAGAGGCTCATTGAAGGGTGGAAGAAGGATTTGAAAGACCAGTTAGCCAAACATAACAATGAATTAGAGAAGGTTTAGTAGCTCCAATAGTCTGCACTATCCAATACTCTATTGTTAAGTTAATTGTAGATGCGATCAATTAATGGGTGGGGTTTGGTGTGGCATATATTGTTCAGTCTCCTTCTTCAGTTGGATCTGTTATGAGTCCATATTTCATACTGACTAGAAAAACGTGGAAAAGTGTAGGGGATTGCAGAGAATGCAATATTGCCAAGTAACTAATATGATATGTATTCATGAAGTTTTGTGTTTCAAAGAAAGCAGTGGACACTAAAACTGCAGAATAGCAAAACGCTGCTATCATAACTGAAGATAATATTCAGGTACAGATCTTAAAGGCTTCCAGTGATTTAAGGCAGAATGTAAAAACAACTGATTTGTGTATCTGGGCAGGTAATGTACAGTTGATTACGTCAAGGAAATTAGACCTCGCTCAAAACTTGCTTCCTTTCCTCCTCTTCAGCTTTGATCCAGGCAGCCTGCAGCATGAAAAAACAATAAGCAAAAGCAACTTCATAATACAATAAGTTAGTGCATTCAAGTCGAAATATCACATATTTACAAACAATTGTATGCAATATTATGTATACCTTGTCTCGTTCAAGTTTGGAGAGATGTGGTTTCATGGAATCTCCCAAACTCAAGCCTCCCCAGGCTGCCTGTAGGTCTCTCTCCCTTGCTTCACGGCGGGATAGAAAGTTTTTGTTCTGATTTTCTGATTCCTGAGAAGACATCAGCTTCTCCCTCTCGAGTCTTGTTCTGTGTTTAACCAGAATTTCATCCAAACCCCCACCAGCTCCTCCATTGGTTACTGAATGCATATTTTTTTCACTTCTCTTTAAGTACTCTGGTATGCATCCCATCTTCTCTTTCTCCAGTTTTGAAACACGCTTTACTAAAATTTCGTCCAAGCTTTGGCAACTAGGTGTACTGCGATTATCCACCTGTTTCTTATTATGTCTTTGCTTATCGTAGTTGCTTTCAGCTAACACGGCTAGCATCTTTTCCCTTTCGAGTCTGTGCACCGGTTTCACTAAGATCTTATCTAAGCTATCTTCCATGTCCCTTCCCATTTTGAATGAAGACTTTGGCATACTAACATTCTCCTTTTCCTCTGGTTCTGTAGCAGAAAGAGATGATTCTTCTGAAGCAGACTTGTAACTTTTCTTCTTCAAGTCCATATCCCGATGTCCTCCTTCACGCAGCTCAATTTTTCTTCTATTTTTTGCTTCTTGTACTTCTTTTTCAAGCCGCGAGACGTGTTTCACAAGATACTTATCAAGACTGGGAACTGCTGGAACTTCTTTATGACTAACAAACGTTTGTCTTGCCTGCAACTTGTTGCTACGAGTTTTGAATTCTTCTCCACCCTTGCGTTTGGTCTCTTGAACTTCCTTCTCAAGATCTGAAGGTGGCTTTGTCAGTACAGTTTCCAAGTTGGGGACAACTTTCTCATCCTGAACACTGCTCAATGGTGGAGGATTTTGTGACGGAGCTTTATCTAAGTCGATCTTCTCTTCCATGGTTACTTCAGAATTCTCTGAGGTCAATTCCTTCGCTTCGTTCTTTCTGCTATTCTTTGCTTCAAGCACCTCTCTTTCCAATTTACTCGTGTGCTTTACCAAGAACTTGTCCAGGCTTGGAAGTCCTGACTCGGCTTGCTTCCTCCCATTATGCGAATTCGATAAGTAGTTTCCAGAACCAACTGACGACGTTCTTCGATCATGAAGCTTGCCACTTTCTACTTCAGCCAAGGCGGCATTCAAACCACAAGTTGCAACTATAGTGGCAAGAGAGGAAAGTTCATCTTCTTTCAAACGCCTAAGCCTTTCATACATCAAGTCCTCGATGTTTGTTACCTTCTCAGAAGTTTTATGTCTCATATGTAAAACCAGCATCTTGCAATCCGAGTTGTTAGAGCTGAAATCATCCTTTCGAGATGCGTCATCAAGTTCCGAGCTGTTCTCTGATTCACATTCGGAAGAATGTTCGGATGAGTCTACATTATTATCACTGTCTGGGTTCTGTGAGATTTTTCGTAGAAGTTCTTTAAAGTCATCTTCTCTTAAAGAAGAGCAGTTCGCAAGCCTAATCAATGCTGTTTTTACTGCAGCAGCCACTTCCTTATCAACCTCAAATTCTGTCTCAAAAGATGCTGTAATGGTGTGAGTTGTAGACCCACCGCCACCAGAAGACAACGTTTCCATTTTGTTCTGTGGACAATTGGGTGTATCATACATGATCACTCCCATAGCTGCAGCTGCTTCGCAAGCTTCAGCTGCGATTTTCTCAGCCCTAAACATCTGGCCTTCAGCTTCTTTAC AAAGATATGGCTGATCGACAACCAATGGATCAACAGCATCAACTTGATCCACAGTTGCAATCCCCGCAGTCACCGAGAGAGGACATGATTGCATATGTGATGGCCTTGGAAGCTGCTCTGCTTCCGTGCTTGCCTGCAAGAGAGTTACAAGCAATAGACCGATCTCCTCACCCTTCTCATCAAATTGACGTGGAGAGACATGCTAGGGATTTTATGGAGGCAGCTAAAAAGCTTCAACTGTACTTCATTGGTTTACAACGTGAGGATCAACCAATCAAAGTGGAAACACTAAGAAAGGAGATATCCGCCATTGAGGAGGAACTAAAATTAAAGAATGACATTATCAAGAAGCATGAGAGGCTCATTGAAGGGTGGAAGAAGGATTTGAAAGACCAGTTAGCCAAACATAACAATGAATTAGAGAAGGTTTAGTAGCTCCAATAGTCTGCACTATCCAATACTCTATTGTTAAGTTAATTGTAGATGCGATCAATTAATGGGTGGGGTTTGGTGTGGCATATATTGTTCAGTCTCCTTCTTCAGTTGGATCTGTTATGAGTCCATATTTCATACTGACTAGAAAAACGTGGAAAAGTGTAGGGGATTGCAGAGAATGCAATATTGCCAAGTAACTAATATGATATGTATTCATGAAGTTTTGTGTTTCAAAGAAAGCAGTGGACACTAAAACTGCAGAATAGCAAAACGCTGCTATCATAACTGAAGATAATATTCAGGTAATGTACAGTTGATTACGTCAAGGAAATTAGACCTCGCTCAAAACTTGCTTCCTTTCCTCCTCTTCAGCTTTGATCCAGGCAGCCTGCAGCATGAAAAAACAATAAGCAAAAGCAACTTCATAATACAATAAGTTAGTGCATTCAAGTCGAAATATCACATATTTACAAACAATTGTATGCAATATTATGTATACCTTGTCTCGTTCAAGTTTGGAGAGATGTGGTTTCATGGAATCTCCCAAACTCAAGCCTCCCCAGGCTGCCTGTAGGTCTCTCTCCCTTGCTTCACGGCGGGATAGAAAGTTTTTGTTCTGATTTTCTGATTCCTGAGAAGACATCAGCTTCTCCCTCTCGAGTCTTGTTCTGTGTTTAACCAGAATTTCATCCAAACCCCCACCAGCTCCTCCATTGGTTACTGAATGCATATTTTTTTCACTTCTCTTTAAGTACTCTGGTATGCATCCCATCTTCTCTTTCTCCAGTTTTGAAACACGCTTTACTAAAATTTCGTCCAAGCTTTGGCAACTAGGTGTACTGCGATTATCCACCTGTTTCTTATTATGTCTTTGCTTATCGTAGTTGCTTTCAGCTAACACGGCTAGCATCTTTTCCCTTTCGAGTCTGTGCACCGGTTTCACTAAGATCTTATCTAAGCTATCTTCCATGTCCCTTCCCATTTTGAATGAAGACTTTGGCATACTAACATTCTCCTTTTCCTCTGGTTCTGTAGCAGAAAGAGATGATTCTTCTGAAGCAGACTTGTAACTTTTCTTCTTCAAGTCCATATCCCGATGTCCTCCTTCACGCAGCTCAATTTTTCTTCTATTTTTTGCTTCTTGTACTTCTTTTTCAAGCCGCGAGACGTGTTTCACAAGATACTTATCAAGACTGGGAACTGCTGGAACTTCTTTATGACTAACAAACGTTTGTCTTGCCTGCAACTTGTTGCTACGAGTTTTGAATTCTTCTCCACCCTTGCGTTTGGTCTCTTGAACTTCCTTCTCAAGATCTGAAGGTGGCTTTGTCAGTACAGTTTCCAAGTTGGGGACAACTTTCTCATCCTGAACACTGCTCAATGGTGGAGGATTTTGTGACGGAGCTTTATCTAAGTCGATCTTCTCTTCCATGGTTACTTCAGAATTCTCTGAGGTCAATTCCTTCGCTTCGTTCTTTCTGCTATTCTTTGCTTCAAGCACCTCTCTTTCCAATTTACTCGTGTGCTTTACCAAGAACTTGTCCAGGCTTGGAAGTCCTGACTCGGCTTGCTTCCTCCCATTATGCGAATTCGATAAGTAGTTTCCAGAACCAACTGACGACGTTCTTCGATCATGAAGCTTGCCACTTTCTACTTCAGCCAAGGCGGCATTCAAACCACAAGTTGCAACTATAGTGGCAAGAGAGGAAAGTTCATCTTCTTTCAAACGCCTAAGCCTTTCATACATCAAGTCCTCGATGTTTGTTACCTTCTCAGAAGTTTTATGTCTCATATGTAAAACCAGCATCTTGCAATCCGAGTTGTTAGAGCTGAAATCATCCTTTCGAGATGCGTCATCAAGTTCCGAGCTGTTCTCTGATTCACATTCGGAAGAATGTTCGGATGAGTCTACATTATTATCACTGTCTGGGTTCTGTGAGATTTTTCGTAGAAGTTCTTTAAAGTCATCTTCTCTTAAAGAAGAGCAGTTCGCAAGCCTAATCAATGCTGTTTTTACTGCAGCAGCCACTTCCTTATCAACCTCAAATTCTGTCTCAAAAGATGCTGTAATGGTGTGAGTTGTAGACCCACCGCCACCAGAAGACAACGTTTCCATTTTGTTCTGTGGACAATTGGGTGTATCATACATGATCACTCCCATAGCTGCAGCTGCTTCGCAAGCTTCAGCTGCGATTTTCTCAGCCCTAAACATCTGGCCTTCAGCTTCTTTAC AAAGATATGGCTGATCGACAACCAATGGATCAACAGCATCAACTTGATCCACAGTTGCAATCCCCGCAGTCACCGAGAGAGGACATGATTGCATATGTGATGGCCTTGGAAGCTGCTCTGCTTCCGTGCTTGCCTGCAAGAGAGTTACAAGCAATAGACCGATCTCCTCACCCTTCTCATCAAATTGACGTGGAGAGACATGCTAGGGATTTTATGGAGGCAGCTAAAAAGCTTCAACTGTACTTCATTGGTTTACAACGTGAGGATCAACCAATCAAAGTGGAAACACTAAGAAAGGAGATATCCGCCATTGAGGAGGAACTAAAATTAAAGAATGACATTATCAAGAAGCATGAGAGGCTCATTGAAGGGTGGAAGAAGGATTTGAAAGACCAGTTAGCCAAACATAACAATGAATTAGAGAAGGTTTAG KDMADRQPMDQQHQLDPQLQSPQSPREDMIAYVMALEAALLPCLPARELQAIDRSPHPSHQIDVERHARDFMEAAKKLQLYFIGLQREDQPIKVETLRKEISAIEEELKLKNDIIKKHERLIEGWKKDLKDQLAKHNNELEKV Homology
BLAST of MC10g0373.1 vs. ExPASy Swiss-Prot
Match: Q9LFA5 (Mediator of RNA polymerase II transcription subunit 28 OS=Arabidopsis thaliana OX=3702 GN=MED28 PE=1 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 6.9e-40 Identity = 88/135 (65.19%), Postives = 112/135 (82.96%), Query Frame = 0
BLAST of MC10g0373.1 vs. NCBI nr
Match: XP_022149222.1 (mediator of RNA polymerase II transcription subunit 28 [Momordica charantia]) HSP 1 Score: 272 bits (696), Expect = 6.82e-92 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of MC10g0373.1 vs. NCBI nr
Match: XP_038904970.1 (mediator of RNA polymerase II transcription subunit 28 [Benincasa hispida] >XP_038904972.1 mediator of RNA polymerase II transcription subunit 28 [Benincasa hispida] >XP_038904973.1 mediator of RNA polymerase II transcription subunit 28 [Benincasa hispida] >XP_038904974.1 mediator of RNA polymerase II transcription subunit 28 [Benincasa hispida]) HSP 1 Score: 254 bits (649), Expect = 1.00e-84 Identity = 132/141 (93.62%), Postives = 136/141 (96.45%), Query Frame = 0
BLAST of MC10g0373.1 vs. NCBI nr
Match: XP_004152267.1 (mediator of RNA polymerase II transcription subunit 28 [Cucumis sativus] >KGN52780.1 hypothetical protein Csa_014841 [Cucumis sativus]) HSP 1 Score: 253 bits (645), Expect = 4.09e-84 Identity = 130/141 (92.20%), Postives = 136/141 (96.45%), Query Frame = 0
BLAST of MC10g0373.1 vs. NCBI nr
Match: XP_022922953.1 (mediator of RNA polymerase II transcription subunit 28 [Cucurbita moschata] >XP_022922954.1 mediator of RNA polymerase II transcription subunit 28 [Cucurbita moschata] >XP_022984538.1 mediator of RNA polymerase II transcription subunit 28 [Cucurbita maxima] >XP_022984539.1 mediator of RNA polymerase II transcription subunit 28 [Cucurbita maxima] >XP_023552182.1 mediator of RNA polymerase II transcription subunit 28 [Cucurbita pepo subsp. pepo] >XP_023552183.1 mediator of RNA polymerase II transcription subunit 28 [Cucurbita pepo subsp. pepo] >KAG6576925.1 Mediator of RNA polymerase II transcription subunit 28, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014951.1 Mediator of RNA polymerase II transcription subunit 28 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 252 bits (644), Expect = 5.81e-84 Identity = 130/141 (92.20%), Postives = 137/141 (97.16%), Query Frame = 0
BLAST of MC10g0373.1 vs. NCBI nr
Match: XP_008454378.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 28 [Cucumis melo] >XP_008454380.1 PREDICTED: mediator of RNA polymerase II transcription subunit 28 [Cucumis melo] >KAA0044351.1 mediator of RNA polymerase II transcription subunit 28 [Cucumis melo var. makuwa] >TYK29480.1 mediator of RNA polymerase II transcription subunit 28 [Cucumis melo var. makuwa]) HSP 1 Score: 249 bits (635), Expect = 1.37e-82 Identity = 129/141 (91.49%), Postives = 134/141 (95.04%), Query Frame = 0
BLAST of MC10g0373.1 vs. ExPASy TrEMBL
Match: A0A6J1D7C5 (mediator of RNA polymerase II transcription subunit 28 OS=Momordica charantia OX=3673 GN=LOC111017697 PE=4 SV=1) HSP 1 Score: 272 bits (696), Expect = 3.30e-92 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of MC10g0373.1 vs. ExPASy TrEMBL
Match: A0A0A0KT19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G00990 PE=4 SV=1) HSP 1 Score: 253 bits (645), Expect = 1.98e-84 Identity = 130/141 (92.20%), Postives = 136/141 (96.45%), Query Frame = 0
BLAST of MC10g0373.1 vs. ExPASy TrEMBL
Match: A0A6J1JAT8 (mediator of RNA polymerase II transcription subunit 28 OS=Cucurbita maxima OX=3661 GN=LOC111482804 PE=4 SV=1) HSP 1 Score: 252 bits (644), Expect = 2.81e-84 Identity = 130/141 (92.20%), Postives = 137/141 (97.16%), Query Frame = 0
BLAST of MC10g0373.1 vs. ExPASy TrEMBL
Match: A0A6J1E897 (mediator of RNA polymerase II transcription subunit 28 OS=Cucurbita moschata OX=3662 GN=LOC111430779 PE=4 SV=1) HSP 1 Score: 252 bits (644), Expect = 2.81e-84 Identity = 130/141 (92.20%), Postives = 137/141 (97.16%), Query Frame = 0
BLAST of MC10g0373.1 vs. ExPASy TrEMBL
Match: A0A1S3BZ89 (mediator of RNA polymerase II transcription subunit 28 OS=Cucumis melo OX=3656 GN=LOC103494796 PE=4 SV=1) HSP 1 Score: 249 bits (635), Expect = 6.62e-83 Identity = 129/141 (91.49%), Postives = 134/141 (95.04%), Query Frame = 0
BLAST of MC10g0373.1 vs. TAIR 10
Match: AT3G52860.1 (unknown protein; Has 86 Blast hits to 86 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi - 13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 164.9 bits (416), Expect = 4.9e-41 Identity = 88/135 (65.19%), Postives = 112/135 (82.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following utr3 feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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