MC09g1386.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGGAGAGAAGAGTACCGAATATTTGTGGGAGGGTTATCGTGGGACATCACGGAGCGTCAGCTCGAGAATGCCTTCAGTCGCTTCGGCAAAATTATCGATTCTCAGGTTACATTTTTTTAAAAAAAATATTTTTGTTGATTTCTGCTCTGATCTGTATGTCTGAAACGGGATTGAACTCCGCCTTAACTGAACATGTCGGAATTAATAATTCATTTTATTTATTGTACGCGAAGGAAATAGAAGAGACTGTAAACTGTAAACTGGGTATTATCCTCCTGTGTCATTGCTCATATGGAGAACGTAATTTCTGAATTTCTATCCCTTCCCTCTGATGGTTACATGTCAAAACACCAGAAATTAGTCGCTTGATTTACTTTTTCTAATTCTTTTTTTTTTCCAGCATTGTTCATGGCACCTTTAATTTCTCTCCGACCTCTTCTCTTTCTGATGTTGTTTTTTTTGTTTCCCCATGCGAATGAGGATGCTGTTTATGAACTTTTTGGGAAGCGGTTTCACTATTCATGTAAAGTTGAATACATCAAGATGCTGAAGGTCATAGTGTTGTATGTTCTTAAGTATTAGCTGATTTAGATCTGCTGGTTAAGAAAAGTGCTACCATCTGGAAATTTGGATATGGTTGGCCACCGACTCAATTTGTGCTCTAGCTGATTGGTGTTTGGTAGGATTTTAATATGCGAATCCAGCTACTAGTTGGTTCTGTGGGATAAAAGAATTTGTCATTGTTTTGCAACAGATAAATGACTTAAAATCAGAGGAACTATTAACAAGTCGTGTGCTGATAACCTGCTTGAGCAGACCTTTCTTGTTTTTCGGTTCCTTGATGCTTTTGAAGAGGAAACTGAAGTGACTAAAATGTTTCAGGATCTGACCAATAAATGTTTTAGTATTTTCTTGGACGATTTTATCTTTCTCTGGATGAAATAAAAAACTATATCTTATCCTTGGCTGACCCTATCCAATGGTGTGACTAAAATCTAATGATGAAGGTTATGTGGTTATATGAGAATTGAGATGATATATGGGGCAGAAGGTCTGGGCTAAATTTACTCTATCGAATCAGATAATTGGTTTGCTTAGTCATCTAATCTCAGAAAATTTTCAGAAGCCATCTGTTATTGGTATGGAAAGATTTGTCGTCTGAAGGTGGTTTCTTAGTACTGGCTGCTTTGATGTTTTGTTTTCTTGGTCTCATATCCCTTACTGTAATTATTATCAAAGTGAGAGATAGCTGGTTTTCTCATTTGCTAGTTTCACACTGGTGTTTGAGAATTGTCAGCTTGATTCTATGATGATGAAAACATTAAAGTGGTGCAATCCTTTGGCCAAGATTTATGATAGTGTGCAAAATACAGATTTGGAGATCAATAACCATTTCATGCTTTTGAGTGGACATCGCATTCTTGATTTTCATTTTGCTGGGATGAAGTCAGAGTTCCCTACTTTTTCAGGCATGATTGGAAAGTTGTCCGTGCTGGTTTCTGTTTAGCAGTTAATGTGGCTAGAAATTGGACTAGCGATGGCAGGCTTAGCAGTTCAGACATTTTCCGATGAATTGGCCAAACTGCATCTGCAGTCTTTAGTTTGACATGTTTTCCCCATTGTATGATGTCAATTTAAGAGGAGCTGAATTGTAAATTTCAGTTTGGAGGCCCTTTCTGATCAGTTGTTTTCTTCTCTGTTGAGTTTGTTACGACACCATGCAGTGGACCTTGTGGAAATTTTTGTCATTTGTACCTGCCAGAGCTTTAAAAGCCTCTGATGCTGGACTCTGTTTTCTTTTATGACGCCGAACATTATGAATTTCTATTTGCTGGGTATAGTACTGCAGCAGAGCAATTGGATCTGAAGCTAAATTTGTGTTCCTATAGGTACAGTGTTGCAGGATGGGACTTTATTCAATGAGTGATCTAGAGCAAGGGATTTAGGTTGTCGCAACCTGAGAGCGACCTGAGAGATTATGGAGCTGCCTTGATGTAGTTTTACGTTCATTTATTTTCATCCTTTGCCCATCGCTTGAAGTTATTCCTCAAGATCAGCCAAGAATCCTGCTATTTTGTTTTCTTTTTTATGGTGTGCTAGTTCCCCTCATTTTATACTTGTTGACAGTTATTTGTGTTAGCAGAGTTTGAACTCCTCAATTATTGATTATATTGAATGCTAAGAAGGGGGTTAAATATGTACCTAGTTATGTATGGTCGCCGTGCAAGATATCGTCATCATCAAGTTTTCTAGTACAGCCTCTTTTTCCACGAACTGATGGGAGCTCAATCACAGAATAAGTTGGCATCCATTGCTTGAAATTTTACTGTGTCCTGGTGGTGAGCCTTGCTTACATCTCCTAGAGCAACATGATGGAAGATCTGTTACTTAAGGATTCATCTTTCTTTGGACTTATTCCATCTATATCACATCACATCACATTTTGGTATTGATCATGTGACAGCAAGATGACCATAAATTTCTTGAGTTCCTTGAATGTATTATTTGTTGAGATTAACAAACCCCTTAGTTGGAGAAATACATATATCCAGTGAAGTGTTTGTACTGGGTTTTTCAAGTTAACGTTGACTTTTGAGTTCCATTTTGGATGCATGACTGCACAGAAGCCCATGTATCCATTTTTTTGTTGGAATTGTTCCTTTTGAATAGAAGGGAGTAGAGGTCTAAAACACTCCCACTTCAGAAGATAGAGCTAAAGACCTGCAGGTTCTATTGTTTTGTTAAGGAATTATGTAACATGTTGCAATGAGTTCTCCATAAATGGAAGAAAAAAGTAAGTTATCAGACTTTTGTTGTATTTTAAAAATATTTTGATGCTGTTATTATCAGTTACTATTAGTTTAAACCTCGAATGAATGCTCTATTTATTACTATTAGTTTGCTGAATCATAATTTGATGGAGGTGGAGTTTTAGCCTCTATTCTTAGTTTTTTGGAGTTTGATACCTCCAACTTGTGGATTATGACAATTATTTGTATTGATTTTTTTTACCTCTTGATGACGTCCCAATTGTTTTTGTGGGAGAATACTTTCAATTTTTGACTGCCCTTAGATTAATCTCATGTTTTTAAACTCAAAACTTGTGATGGCTGTCATCTCGGATTTTAAATACCGATGAGTTTTGGGCCAACTTAAATTGGTGGTTAGGTTGTAGAGATCATCTGAATTTTGTCATCTGTGAACATTGAGGAGTTGGAAAATCTGCGACCCACCTTATTTATTTATTTTAATTATGGTGGTTTTCATCACCATTACTTTGATGTCAGTTTTTTTTTTTTGTTATGTTAGACAAATTACTTCGCAGTCTAGGTTAAAATATGCTGATGGCAGGTAGGTTTAAAGTTATTACATTTATAAATTATTAGCATGAGATGTACTTTGCTAGCTCTTATTTAATCAGTTGATTGATTTAAGTTTTACTAGTTGTCCAATTGCTTGGCGTAAACTTCCTCTTTGGCATTCTTGTAGATCATGTTGGAAAAAAATACAGGACGCCGTCGTGGTTTTGGGTTTATTACGTTTTCAGATCGCCGGGGAATGGATGATGCAATCAGAGAGATGCATGGACAGGAATTGGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATTGACCATGGTTACAGGGGGGCAGGCTACTCAACTGGTGGCAGAGGGGGTAGCTATGGGGGTGGGGGAGGAGATAAATCTGCGAGGCAAGATGAATGCTTCAAATGCGGGCGTCTTGGACACTGGGCCAGAGATTGTCATTCAGTGGGTGGTGGTCGAGGAAGAGGAGATTCATTTCTTGCACGTTCCCGGCTGGGGGATAGTGATCGTGGGGATCGCTTCGCTGGAGATAATAATCGATATGTGGATGATCGTTATGAAGGTGGGCGTTTTGGAGATAGAGATCGTTTTGATAGCAGCAGGGATAACAAGTATGCGAGTCGTGATCGCTACGTTAGTGACAGGTACCTGACTCTGACTCAGATATTTTGCAAGGATTTGAGACATTCATTGCGGTCTATAAAAATGTCTTTGGTGATGAAAGTGGTTATCTTTCATAGTCTTCAAATTTAAAATTTTTTTATGTTTTTGAAGTAATTATCACTAGAAATTGCAAATTGGCAGAAGAAGGGATCCAATATCGTTTCTTACAATGATTAATGCCGTGACATCTCTATTATTTCGTTGCAGCATCTTAGTCAGTCAATCCTTCACTCCTAATTATTTATATACACTGCAAACATGCAGGTACCCACCCAGTGGAGATCGCTTTGGAAGCAGTGGGTATAATAACGACTCTGATCGATTTCCTGTAAATGGGTATGGCAAAGATAGGGGCTATTATAGAGATGGATTTCCTGTAAATGGGTATGGCAAAGATAGGGTCTATTATAGAGATGGCGGGCCTCGTGGCATCGATAAGTATGGAAGTGGAGGTCCAGCACGTGACGAGGGAAGAAGCTACAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGAGCTGGGCGGCCATCATCATTTGACCGTTAT ATGGCTGGGAGAGAAGAGTACCGAATATTTGTGGGAGGGTTATCGTGGGACATCACGGAGCGTCAGCTCGAGAATGCCTTCAGTCGCTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAAAATACAGGACGCCGTCGTGGTTTTGGGTTTATTACGTTTTCAGATCGCCGGGGAATGGATGATGCAATCAGAGAGATGCATGGACAGGAATTGGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATTGACCATGGTTACAGGGGGGCAGGCTACTCAACTGGTGGCAGAGGGGGTAGCTATGGGGGTGGGGGAGGAGATAAATCTGCGAGGCAAGATGAATGCTTCAAATGCGGGCGTCTTGGACACTGGGCCAGAGATTGTCATTCAGTGGGTGGTGGTCGAGGAAGAGGAGATTCATTTCTTGCACGTTCCCGGCTGGGGGATAGTGATCGTGGGGATCGCTTCGCTGGAGATAATAATCGATATGTGGATGATCGTTATGAAGGTGGGCGTTTTGGAGATAGAGATCGTTTTGATAGCAGCAGGGATAACAAGTATGCGAGTCGTGATCGCTACGTTAGTGACAGGTACCCACCCAGTGGAGATCGCTTTGGAAGCAGTGGGTATAATAACGACTCTGATCGATTTCCTGTAAATGGGTATGGCAAAGATAGGGGCTATTATAGAGATGGATTTCCTGTAAATGGGTATGGCAAAGATAGGGTCTATTATAGAGATGGCGGGCCTCGTGGCATCGATAAGTATGGAAGTGGAGGTCCAGCACGTGACGAGGGAAGAAGCTACAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGAGCTGGGCGGCCATCATCATTTGACCGTTAT ATGGCTGGGAGAGAAGAGTACCGAATATTTGTGGGAGGGTTATCGTGGGACATCACGGAGCGTCAGCTCGAGAATGCCTTCAGTCGCTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAAAATACAGGACGCCGTCGTGGTTTTGGGTTTATTACGTTTTCAGATCGCCGGGGAATGGATGATGCAATCAGAGAGATGCATGGACAGGAATTGGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATTGACCATGGTTACAGGGGGGCAGGCTACTCAACTGGTGGCAGAGGGGGTAGCTATGGGGGTGGGGGAGGAGATAAATCTGCGAGGCAAGATGAATGCTTCAAATGCGGGCGTCTTGGACACTGGGCCAGAGATTGTCATTCAGTGGGTGGTGGTCGAGGAAGAGGAGATTCATTTCTTGCACGTTCCCGGCTGGGGGATAGTGATCGTGGGGATCGCTTCGCTGGAGATAATAATCGATATGTGGATGATCGTTATGAAGGTGGGCGTTTTGGAGATAGAGATCGTTTTGATAGCAGCAGGGATAACAAGTATGCGAGTCGTGATCGCTACGTTAGTGACAGGTACCCACCCAGTGGAGATCGCTTTGGAAGCAGTGGGTATAATAACGACTCTGATCGATTTCCTGTAAATGGGTATGGCAAAGATAGGGGCTATTATAGAGATGGATTTCCTGTAAATGGGTATGGCAAAGATAGGGTCTATTATAGAGATGGCGGGCCTCGTGGCATCGATAAGTATGGAAGTGGAGGTCCAGCACGTGACGAGGGAAGAAGCTACAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGAGCTGGGCGGCCATCATCATTTGACCGTTAT MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRGMDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFDRY Homology
BLAST of MC09g1386.1 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.9e-71 Identity = 173/324 (53.40%), Postives = 208/324 (64.20%), Query Frame = 0
BLAST of MC09g1386.1 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.4e-66 Identity = 162/315 (51.43%), Postives = 195/315 (61.90%), Query Frame = 0
BLAST of MC09g1386.1 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.7e-30 Identity = 109/300 (36.33%), Postives = 155/300 (51.67%), Query Frame = 0
BLAST of MC09g1386.1 vs. ExPASy Swiss-Prot
Match: Q99070 (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23 Identity = 65/140 (46.43%), Postives = 85/140 (60.71%), Query Frame = 0
BLAST of MC09g1386.1 vs. ExPASy Swiss-Prot
Match: P49311 (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.5e-23 Identity = 72/156 (46.15%), Postives = 90/156 (57.69%), Query Frame = 0
BLAST of MC09g1386.1 vs. NCBI nr
Match: XP_022139343.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]) HSP 1 Score: 607 bits (1566), Expect = 2.54e-219 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of MC09g1386.1 vs. NCBI nr
Match: XP_022139344.1 (glycine-rich RNA-binding protein RZ1C-like isoform X2 [Momordica charantia] >XP_022139345.1 glycine-rich RNA-binding protein RZ1C-like isoform X2 [Momordica charantia]) HSP 1 Score: 532 bits (1370), Expect = 4.70e-190 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of MC09g1386.1 vs. NCBI nr
Match: XP_008446829.1 (PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >XP_008446830.1 PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >KAA0034698.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa] >TYK09249.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 513 bits (1320), Expect = 4.57e-182 Identity = 266/302 (88.08%), Postives = 270/302 (89.40%), Query Frame = 0
BLAST of MC09g1386.1 vs. NCBI nr
Match: XP_038892830.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida]) HSP 1 Score: 512 bits (1318), Expect = 1.03e-181 Identity = 267/304 (87.83%), Postives = 274/304 (90.13%), Query Frame = 0
BLAST of MC09g1386.1 vs. NCBI nr
Match: XP_004142412.1 (glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus]) HSP 1 Score: 511 bits (1317), Expect = 1.41e-181 Identity = 264/302 (87.42%), Postives = 270/302 (89.40%), Query Frame = 0
BLAST of MC09g1386.1 vs. ExPASy TrEMBL
Match: A0A6J1CFE7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010282 PE=4 SV=1) HSP 1 Score: 607 bits (1566), Expect = 1.23e-219 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of MC09g1386.1 vs. ExPASy TrEMBL
Match: A0A6J1CCP3 (glycine-rich RNA-binding protein RZ1C-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010282 PE=4 SV=1) HSP 1 Score: 532 bits (1370), Expect = 2.28e-190 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
BLAST of MC09g1386.1 vs. ExPASy TrEMBL
Match: A0A1S3BGN5 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489439 PE=4 SV=1) HSP 1 Score: 513 bits (1320), Expect = 2.21e-182 Identity = 266/302 (88.08%), Postives = 270/302 (89.40%), Query Frame = 0
BLAST of MC09g1386.1 vs. ExPASy TrEMBL
Match: A0A5D3CG30 (Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002430 PE=4 SV=1) HSP 1 Score: 513 bits (1320), Expect = 2.21e-182 Identity = 266/302 (88.08%), Postives = 270/302 (89.40%), Query Frame = 0
BLAST of MC09g1386.1 vs. ExPASy TrEMBL
Match: A0A6J1GY86 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458292 PE=4 SV=1) HSP 1 Score: 485 bits (1249), Expect = 8.71e-172 Identity = 251/301 (83.39%), Postives = 258/301 (85.71%), Query Frame = 0
BLAST of MC09g1386.1 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain ) HSP 1 Score: 270.8 bits (691), Expect = 1.3e-72 Identity = 173/324 (53.40%), Postives = 208/324 (64.20%), Query Frame = 0
BLAST of MC09g1386.1 vs. TAIR 10
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain ) HSP 1 Score: 254.6 bits (649), Expect = 9.9e-68 Identity = 162/315 (51.43%), Postives = 195/315 (61.90%), Query Frame = 0
BLAST of MC09g1386.1 vs. TAIR 10
Match: AT1G60650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain ) HSP 1 Score: 254.6 bits (649), Expect = 9.9e-68 Identity = 162/315 (51.43%), Postives = 195/315 (61.90%), Query Frame = 0
BLAST of MC09g1386.1 vs. TAIR 10
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain ) HSP 1 Score: 134.0 bits (336), Expect = 1.9e-31 Identity = 109/300 (36.33%), Postives = 155/300 (51.67%), Query Frame = 0
BLAST of MC09g1386.1 vs. TAIR 10
Match: AT4G39260.1 (cold, circadian rhythm, and RNA binding 1 ) HSP 1 Score: 109.8 bits (273), Expect = 3.9e-24 Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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