MC09g1386 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g1386
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	glycine-rich RNA-binding protein RZ1C-like isoform X1
Location	MC09: 19926768 .. 19931331 (+)
RNA-Seq Expression	MC09g1386
Synteny	MC09g1386

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGAGAGAAGAGTACCGAATATTTGTGGGAGGGTTATCGTGGGACATCACGGAGCGTCAGCTCGAGAATGCCTTCAGTCGCTTCGGCAAAATTATCGATTCTCAGGTTACATTTTTTTAAAAAAAATATTTTTGTTGATTTCTGCTCTGATCTGTATGTCTGAAACGGGATTGAACTCCGCCTTAACTGAACATGTCGGAATTAATAATTCATTTTATTTATTGTACGCGAAGGAAATAGAAGAGACTGTAAACTGTAAACTGGGTATTATCCTCCTGTGTCATTGCTCATATGGAGAACGTAATTTCTGAATTTCTATCCCTTCCCTCTGATGGTTACATGTCAAAACACCAGAAATTAGTCGCTTGATTTACTTTTTCTAATTCTTTTTTTTTTCCAGCATTGTTCATGGCACCTTTAATTTCTCTCCGACCTCTTCTCTTTCTGATGTTGTTTTTTTTGTTTCCCCATGCGAATGAGGATGCTGTTTATGAACTTTTTGGGAAGCGGTTTCACTATTCATGTAAAGTTGAATACATCAAGATGCTGAAGGTCATAGTGTTGTATGTTCTTAAGTATTAGCTGATTTAGATCTGCTGGTTAAGAAAAGTGCTACCATCTGGAAATTTGGATATGGTTGGCCACCGACTCAATTTGTGCTCTAGCTGATTGGTGTTTGGTAGGATTTTAATATGCGAATCCAGCTACTAGTTGGTTCTGTGGGATAAAAGAATTTGTCATTGTTTTGCAACAGATAAATGACTTAAAATCAGAGGAACTATTAACAAGTCGTGTGCTGATAACCTGCTTGAGCAGACCTTTCTTGTTTTTCGGTTCCTTGATGCTTTTGAAGAGGAAACTGAAGTGACTAAAATGTTTCAGGATCTGACCAATAAATGTTTTAGTATTTTCTTGGACGATTTTATCTTTCTCTGGATGAAATAAAAAACTATATCTTATCCTTGGCTGACCCTATCCAATGGTGTGACTAAAATCTAATGATGAAGGTTATGTGGTTATATGAGAATTGAGATGATATATGGGGCAGAAGGTCTGGGCTAAATTTACTCTATCGAATCAGATAATTGGTTTGCTTAGTCATCTAATCTCAGAAAATTTTCAGAAGCCATCTGTTATTGGTATGGAAAGATTTGTCGTCTGAAGGTGGTTTCTTAGTACTGGCTGCTTTGATGTTTTGTTTTCTTGGTCTCATATCCCTTACTGTAATTATTATCAAAGTGAGAGATAGCTGGTTTTCTCATTTGCTAGTTTCACACTGGTGTTTGAGAATTGTCAGCTTGATTCTATGATGATGAAAACATTAAAGTGGTGCAATCCTTTGGCCAAGATTTATGATAGTGTGCAAAATACAGATTTGGAGATCAATAACCATTTCATGCTTTTGAGTGGACATCGCATTCTTGATTTTCATTTTGCTGGGATGAAGTCAGAGTTCCCTACTTTTTCAGGCATGATTGGAAAGTTGTCCGTGCTGGTTTCTGTTTAGCAGTTAATGTGGCTAGAAATTGGACTAGCGATGGCAGGCTTAGCAGTTCAGACATTTTCCGATGAATTGGCCAAACTGCATCTGCAGTCTTTAGTTTGACATGTTTTCCCCATTGTATGATGTCAATTTAAGAGGAGCTGAATTGTAAATTTCAGTTTGGAGGCCCTTTCTGATCAGTTGTTTTCTTCTCTGTTGAGTTTGTTACGACACCATGCAGTGGACCTTGTGGAAATTTTTGTCATTTGTACCTGCCAGAGCTTTAAAAGCCTCTGATGCTGGACTCTGTTTTCTTTTATGACGCCGAACATTATGAATTTCTATTTGCTGGGTATAGTACTGCAGCAGAGCAATTGGATCTGAAGCTAAATTTGTGTTCCTATAGGTACAGTGTTGCAGGATGGGACTTTATTCAATGAGTGATCTAGAGCAAGGGATTTAGGTTGTCGCAACCTGAGAGCGACCTGAGAGATTATGGAGCTGCCTTGATGTAGTTTTACGTTCATTTATTTTCATCCTTTGCCCATCGCTTGAAGTTATTCCTCAAGATCAGCCAAGAATCCTGCTATTTTGTTTTCTTTTTTATGGTGTGCTAGTTCCCCTCATTTTATACTTGTTGACAGTTATTTGTGTTAGCAGAGTTTGAACTCCTCAATTATTGATTATATTGAATGCTAAGAAGGGGGTTAAATATGTACCTAGTTATGTATGGTCGCCGTGCAAGATATCGTCATCATCAAGTTTTCTAGTACAGCCTCTTTTTCCACGAACTGATGGGAGCTCAATCACAGAATAAGTTGGCATCCATTGCTTGAAATTTTACTGTGTCCTGGTGGTGAGCCTTGCTTACATCTCCTAGAGCAACATGATGGAAGATCTGTTACTTAAGGATTCATCTTTCTTTGGACTTATTCCATCTATATCACATCACATCACATTTTGGTATTGATCATGTGACAGCAAGATGACCATAAATTTCTTGAGTTCCTTGAATGTATTATTTGTTGAGATTAACAAACCCCTTAGTTGGAGAAATACATATATCCAGTGAAGTGTTTGTACTGGGTTTTTCAAGTTAACGTTGACTTTTGAGTTCCATTTTGGATGCATGACTGCACAGAAGCCCATGTATCCATTTTTTTGTTGGAATTGTTCCTTTTGAATAGAAGGGAGTAGAGGTCTAAAACACTCCCACTTCAGAAGATAGAGCTAAAGACCTGCAGGTTCTATTGTTTTGTTAAGGAATTATGTAACATGTTGCAATGAGTTCTCCATAAATGGAAGAAAAAAGTAAGTTATCAGACTTTTGTTGTATTTTAAAAATATTTTGATGCTGTTATTATCAGTTACTATTAGTTTAAACCTCGAATGAATGCTCTATTTATTACTATTAGTTTGCTGAATCATAATTTGATGGAGGTGGAGTTTTAGCCTCTATTCTTAGTTTTTTGGAGTTTGATACCTCCAACTTGTGGATTATGACAATTATTTGTATTGATTTTTTTTACCTCTTGATGACGTCCCAATTGTTTTTGTGGGAGAATACTTTCAATTTTTGACTGCCCTTAGATTAATCTCATGTTTTTAAACTCAAAACTTGTGATGGCTGTCATCTCGGATTTTAAATACCGATGAGTTTTGGGCCAACTTAAATTGGTGGTTAGGTTGTAGAGATCATCTGAATTTTGTCATCTGTGAACATTGAGGAGTTGGAAAATCTGCGACCCACCTTATTTATTTATTTTAATTATGGTGGTTTTCATCACCATTACTTTGATGTCAGTTTTTTTTTTTTGTTATGTTAGACAAATTACTTCGCAGTCTAGGTTAAAATATGCTGATGGCAGGTAGGTTTAAAGTTATTACATTTATAAATTATTAGCATGAGATGTACTTTGCTAGCTCTTATTTAATCAGTTGATTGATTTAAGTTTTACTAGTTGTCCAATTGCTTGGCGTAAACTTCCTCTTTGGCATTCTTGTAGATCATGTTGGAAAAAAATACAGGACGCCGTCGTGGTTTTGGGTTTATTACGTTTTCAGATCGCCGGGGAATGGATGATGCAATCAGAGAGATGCATGGACAGGAATTGGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATTGACCATGGTTACAGGGGGGCAGGCTACTCAACTGGTGGCAGAGGGGGTAGCTATGGGGGTGGGGGAGGAGATAAATCTGCGAGGCAAGATGAATGCTTCAAATGCGGGCGTCTTGGACACTGGGCCAGAGATTGTCATTCAGTGGGTGGTGGTCGAGGAAGAGGAGATTCATTTCTTGCACGTTCCCGGCTGGGGGATAGTGATCGTGGGGATCGCTTCGCTGGAGATAATAATCGATATGTGGATGATCGTTATGAAGGTGGGCGTTTTGGAGATAGAGATCGTTTTGATAGCAGCAGGGATAACAAGTATGCGAGTCGTGATCGCTACGTTAGTGACAGGTACCTGACTCTGACTCAGATATTTTGCAAGGATTTGAGACATTCATTGCGGTCTATAAAAATGTCTTTGGTGATGAAAGTGGTTATCTTTCATAGTCTTCAAATTTAAAATTTTTTTATGTTTTTGAAGTAATTATCACTAGAAATTGCAAATTGGCAGAAGAAGGGATCCAATATCGTTTCTTACAATGATTAATGCCGTGACATCTCTATTATTTCGTTGCAGCATCTTAGTCAGTCAATCCTTCACTCCTAATTATTTATATACACTGCAAACATGCAGGTACCCACCCAGTGGAGATCGCTTTGGAAGCAGTGGGTATAATAACGACTCTGATCGATTTCCTGTAAATGGGTATGGCAAAGATAGGGGCTATTATAGAGATGGATTTCCTGTAAATGGGTATGGCAAAGATAGGGTCTATTATAGAGATGGCGGGCCTCGTGGCATCGATAAGTATGGAAGTGGAGGTCCAGCACGTGACGAGGGAAGAAGCTACAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGAGCTGGGCGGCCATCATCATTTGACCGTTAT

mRNA sequence

ATGGCTGGGAGAGAAGAGTACCGAATATTTGTGGGAGGGTTATCGTGGGACATCACGGAGCGTCAGCTCGAGAATGCCTTCAGTCGCTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAAAATACAGGACGCCGTCGTGGTTTTGGGTTTATTACGTTTTCAGATCGCCGGGGAATGGATGATGCAATCAGAGAGATGCATGGACAGGAATTGGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATTGACCATGGTTACAGGGGGGCAGGCTACTCAACTGGTGGCAGAGGGGGTAGCTATGGGGGTGGGGGAGGAGATAAATCTGCGAGGCAAGATGAATGCTTCAAATGCGGGCGTCTTGGACACTGGGCCAGAGATTGTCATTCAGTGGGTGGTGGTCGAGGAAGAGGAGATTCATTTCTTGCACGTTCCCGGCTGGGGGATAGTGATCGTGGGGATCGCTTCGCTGGAGATAATAATCGATATGTGGATGATCGTTATGAAGGTGGGCGTTTTGGAGATAGAGATCGTTTTGATAGCAGCAGGGATAACAAGTATGCGAGTCGTGATCGCTACGTTAGTGACAGGTACCCACCCAGTGGAGATCGCTTTGGAAGCAGTGGGTATAATAACGACTCTGATCGATTTCCTGTAAATGGGTATGGCAAAGATAGGGGCTATTATAGAGATGGATTTCCTGTAAATGGGTATGGCAAAGATAGGGTCTATTATAGAGATGGCGGGCCTCGTGGCATCGATAAGTATGGAAGTGGAGGTCCAGCACGTGACGAGGGAAGAAGCTACAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGAGCTGGGCGGCCATCATCATTTGACCGTTAT

Coding sequence (CDS)

ATGGCTGGGAGAGAAGAGTACCGAATATTTGTGGGAGGGTTATCGTGGGACATCACGGAGCGTCAGCTCGAGAATGCCTTCAGTCGCTTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAAAATACAGGACGCCGTCGTGGTTTTGGGTTTATTACGTTTTCAGATCGCCGGGGAATGGATGATGCAATCAGAGAGATGCATGGACAGGAATTGGGAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATTGACCATGGTTACAGGGGGGCAGGCTACTCAACTGGTGGCAGAGGGGGTAGCTATGGGGGTGGGGGAGGAGATAAATCTGCGAGGCAAGATGAATGCTTCAAATGCGGGCGTCTTGGACACTGGGCCAGAGATTGTCATTCAGTGGGTGGTGGTCGAGGAAGAGGAGATTCATTTCTTGCACGTTCCCGGCTGGGGGATAGTGATCGTGGGGATCGCTTCGCTGGAGATAATAATCGATATGTGGATGATCGTTATGAAGGTGGGCGTTTTGGAGATAGAGATCGTTTTGATAGCAGCAGGGATAACAAGTATGCGAGTCGTGATCGCTACGTTAGTGACAGGTACCCACCCAGTGGAGATCGCTTTGGAAGCAGTGGGTATAATAACGACTCTGATCGATTTCCTGTAAATGGGTATGGCAAAGATAGGGGCTATTATAGAGATGGATTTCCTGTAAATGGGTATGGCAAAGATAGGGTCTATTATAGAGATGGCGGGCCTCGTGGCATCGATAAGTATGGAAGTGGAGGTCCAGCACGTGACGAGGGAAGAAGCTACAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGAGCTGGGCGGCCATCATCATTTGACCGTTAT

Protein sequence

MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRGMDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFDRY

Homology

[Close]

BLAST of MC09g1386 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-71
Identity = 173/324 (53.40%), Postives = 208/324 (64.20%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AFSRFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGED--IDHGYRG---AGYSTGGRGGSYGGGGGD 120
           MD++IREMHG++ G+R+ISVN+AEPK+G D    HG RG   +GYS  G+G   GGGGG 
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 KSARQDECFKCGRLGHWARDCHSVGGGRG---RGDSFLARSRLGDSDRGDRFAG-----D 180
               +DECFKCGR+GHWARDC S GGGRG    G S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 NNRYVDDRYEG-GRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRF-GSSGYNNDSDRF 240
             RY+DDRY+G  R+G RDRFDS     Y  RDRY SDRY    DRF G   Y+  SDR+
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR--EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDRY 240

Query: 241 PVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPAR---DEGRSYRNRP- 300
           P   Y K R + RD  P    G DR     GG R      +GGP R   +EGR +R+R  
Sbjct: 241 PPGSYDKARSFERDIAP--SAGSDRY----GGGR------AGGPIRGGGEEGRGFRSRAG 300

[Close]

BLAST of MC09g1386 vs. ExPASy Swiss-Prot
Match: O22703 (Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-66
Identity = 162/315 (51.43%), Postives = 195/315 (61.90%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F R+GKI + QIM+ ++TGR RGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQELGERIISVNKAEPKM-GEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQD 122
           DAI+ MHG+ELG ++ISVNKAEPK+ GED+D   +G GYS+ G+G             +D
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKG------------TED 127

Query: 123 ECFKCGRLGHWARDCHSVGGGRGRGDSFLA-RSRLGDSD-RGDRFAGDN----------- 182
           ECFKC R GHWARDC S G  R R    LA RSR+GD D   DR+ GD            
Sbjct: 128 ECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLERERERERE 187

Query: 183 -NRYVDDR--YEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRF 242
            +RY+D R   +GGR+  RDRFDS   +KY  RD Y  +RY P GDRF S  Y       
Sbjct: 188 FDRYMDGRRDRDGGRYSYRDRFDSG--DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYD 300
                G++R Y RD            Y RD      D+YG  GP RDEGR YR+RP PYD
Sbjct: 248 ENEYRGRERSYDRDR-----------YARDTS----DRYGDMGPIRDEGRPYRSRPGPYD 292

[Close]

BLAST of MC09g1386 vs. ExPASy Swiss-Prot
Match: Q9LIN3 (Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-30
Identity = 109/300 (36.33%), Postives = 155/300 (51.67%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMG-----EDIDHGYRGAGYSTGGRGGSYGGGGGD 120
           MD+AI  M+G +L  R I+V+KA+P  G      D D G R  GY       S G GGGD
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRG-RDRGYDRDRSRPSGGRGGGD 120

Query: 121 KSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRY--VD 180
                  CFKCG+ GH+AR+C S                    D G RF+  ++RY   D
Sbjct: 121 -------CFKCGKPGHFARECPSE----------------SSRDGGGRFSSKDDRYSSKD 180

Query: 181 DRY--EGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYG 240
           DRY  +  R+G ++    ++D++Y+S+D    DRY    DR+GS            + YG
Sbjct: 181 DRYGAKDDRYGAKEDRYGAKDDRYSSKD----DRYSSKDDRYGSRDGGG-------SRYG 240

Query: 241 KDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAG 292
            DR   R G      G+     RDGG RG      GG         R+  APYDRP   G
Sbjct: 241 PDRSGERAG------GRS----RDGGSRG----APGGE--------RHSRAPYDRPRAGG 243

[Close]

BLAST of MC09g1386 vs. ExPASy Swiss-Prot
Match: Q99070 (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23
Identity = 65/140 (46.43%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W      LE AF+ FG++IDS+++ ++ TGR RGFGF+TFS  + M DAI
Sbjct: 7   EYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAI 66

Query: 66  REMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGR-GGSYGGGGGDKSARQDECF 125
             M+G+EL  R I+VN+A+ + G     GY G G   GGR GG YGGGGG    R++   
Sbjct: 67  ENMNGKELDGRNITVNQAQSRGGGGGGGGYGGGGGGYGGREGGGYGGGGGGYGGRRE--- 126

Query: 126 KCGRLGHWARDCHSVGGGRG 145
             G  G+        GGG G
Sbjct: 127 --GGGGYGGGGYGGGGGGYG 141

[Close]

BLAST of MC09g1386 vs. ExPASy Swiss-Prot
Match: P49311 (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-23
Identity = 72/156 (46.15%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   ER LE AFS+FG+++DS+I+ ++ TGR RGFGF+TF D + M DAI
Sbjct: 7   EYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66

Query: 66  REMHGQELGERIISVNKAEPK------MGEDIDHGYR-GAGYSTGG--------RGGSYG 125
             M+GQ+L  R I+VN+A+ +       G     GYR G GY  GG         GG Y 
Sbjct: 67  EGMNGQDLDGRSITVNEAQSRGSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGRREGGGYS 126

Query: 126 GGGGDKSARQDECFKCGRLGHWARDCHSVGGGRGRG 147
           GGGG  S+R       G  G   RD    GGG G G
Sbjct: 127 GGGGGYSSRGGGGGGYG--GGGRRDGGGYGGGEGGG 160

[Close]

BLAST of MC09g1386 vs. NCBI nr
Match: XP_022139343.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia])

HSP 1 Score: 607 bits (1566), Expect = 2.54e-219
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120
           MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120

Query: 121 DECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGR 180
           DECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGR
Sbjct: 121 DECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGR 180

Query: 181 FGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYRDG 240
           FGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYRDG
Sbjct: 181 FGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYRDG 240

Query: 241 FPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFDRY 299
           FPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFDRY
Sbjct: 241 FPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFDRY 299

[Close]

BLAST of MC09g1386 vs. NCBI nr
Match: XP_022139344.1 (glycine-rich RNA-binding protein RZ1C-like isoform X2 [Momordica charantia] >XP_022139345.1 glycine-rich RNA-binding protein RZ1C-like isoform X2 [Momordica charantia])

HSP 1 Score: 532 bits (1370), Expect = 4.70e-190
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 39  MLEKNTGRRRGFGFITFSDRRGMDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGA 98
           MLEKNTGRRRGFGFITFSDRRGMDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGA
Sbjct: 1   MLEKNTGRRRGFGFITFSDRRGMDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGA 60

Query: 99  GYSTGGRGGSYGGGGGDKSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDS 158
           GYSTGGRGGSYGGGGGDKSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDS
Sbjct: 61  GYSTGGRGGSYGGGGGDKSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDS 120

Query: 159 DRGDRFAGDNNRYVDDRYEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGY 218
           DRGDRFAGDNNRYVDDRYEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGY
Sbjct: 121 DRGDRFAGDNNRYVDDRYEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGY 180

Query: 219 NNDSDRFPVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYR 278
           NNDSDRFPVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYR
Sbjct: 181 NNDSDRFPVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYR 240

Query: 279 NRPAPYDRPSRAGRPSSFDRY 299
           NRPAPYDRPSRAGRPSSFDRY
Sbjct: 241 NRPAPYDRPSRAGRPSSFDRY 261

[Close]

BLAST of MC09g1386 vs. NCBI nr
Match: XP_008446829.1 (PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >XP_008446830.1 PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] >KAA0034698.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa] >TYK09249.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 513 bits (1320), Expect = 4.57e-182
Identity = 266/302 (88.08%), Postives = 270/302 (89.40%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120
           MDDAIREMHGQE GERIISVNKAEPKMGED+DHGYRG GYSTGGRG SYGGGGGD+SARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRG-SYGGGGGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCHSVGGGRGRG-DSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
           DECFKCGRLGHWARDC SVGGGRGRG DSFLARSRLGD DRGDRFAGD NRYVDDRYEGG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180

Query: 181 -RFGDRDRFDSS-RDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYY 240
            RFGDRDRFDSS RDNKY SRDRYVSDRYPP GDRFGS  YNNDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFD 299
           RDG                 PRG+DKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSFD
Sbjct: 241 RDG-----------------PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFD 284

[Close]

BLAST of MC09g1386 vs. NCBI nr
Match: XP_038892830.1 (glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida])

HSP 1 Score: 512 bits (1318), Expect = 1.03e-181
Identity = 267/304 (87.83%), Postives = 274/304 (90.13%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGG--DKSA 120
           MDDAIREMHGQE GERIISVNKAEPKMGED+DHGYRG GYSTGGRG SYGGGGG  D+SA
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRG-SYGGGGGGGDRSA 120

Query: 121 RQDECFKCGRLGHWARDCHSVGGGRGRG-DSFLARSRLGDSDRGDRFAGDNNRYVDDRYE 180
           RQDECFKCGRLGHWARDC SVGGGRGRG DSFLAR+RLGDSDRGDRFAGDNNRYVDDRYE
Sbjct: 121 RQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLARARLGDSDRGDRFAGDNNRYVDDRYE 180

Query: 181 GG-RFGDRDRFDSS-RDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRG 240
           GG RFGDRDRFDSS RDNKY SRDRYVS+RYPP GDRFGSS YNNDSDRFPVNGYGKDRG
Sbjct: 181 GGGRFGDRDRFDSSSRDNKYGSRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRG 240

Query: 241 YYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSS 299
                           YYRDGGPRG+DKYGSGGPAR+EGRSYRNRPAPYDRPSR GRPSS
Sbjct: 241 ----------------YYRDGGPRGVDKYGSGGPARNEGRSYRNRPAPYDRPSRGGRPSS 287

[Close]

BLAST of MC09g1386 vs. NCBI nr
Match: XP_004142412.1 (glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus])

HSP 1 Score: 511 bits (1317), Expect = 1.41e-181
Identity = 264/302 (87.42%), Postives = 270/302 (89.40%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120
           MDDAIREMHGQE GERIISVNKAEPKMGED+DHGYRG GYSTGGRG   GGGGGD+SARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCHSVGGGRGRG-DSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
           DECFKCGRLGHWARDC SVGGGRGRG DSFLARSRLGDSDRGDRFAGD NRYVDDRY+GG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDSDRGDRFAGDANRYVDDRYDGG 180

Query: 181 -RFGDRDRFDSS-RDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYY 240
            RFGDRDRFDSS RDNKY SRDRYVSDRYPP GDRFGSS Y NDSDRFPVNGYGKDRG  
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYTNDSDRFPVNGYGKDRG-- 240

Query: 241 RDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFD 299
                         YYRDGGPRG+DKYGSGGPARDEGRSYRNRPAPYDRP+R GRPSSFD
Sbjct: 241 --------------YYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPNRGGRPSSFD 286

[Close]

BLAST of MC09g1386 vs. ExPASy TrEMBL
Match: A0A6J1CFE7 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010282 PE=4 SV=1)

HSP 1 Score: 607 bits (1566), Expect = 1.23e-219
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120
           MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ
Sbjct: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120

Query: 121 DECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGR 180
           DECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGR
Sbjct: 121 DECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGGR 180

Query: 181 FGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYRDG 240
           FGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYRDG
Sbjct: 181 FGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYRDG 240

Query: 241 FPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFDRY 299
           FPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFDRY
Sbjct: 241 FPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFDRY 299

[Close]

BLAST of MC09g1386 vs. ExPASy TrEMBL
Match: A0A6J1CCP3 (glycine-rich RNA-binding protein RZ1C-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010282 PE=4 SV=1)

HSP 1 Score: 532 bits (1370), Expect = 2.28e-190
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 39  MLEKNTGRRRGFGFITFSDRRGMDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGA 98
           MLEKNTGRRRGFGFITFSDRRGMDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGA
Sbjct: 1   MLEKNTGRRRGFGFITFSDRRGMDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGA 60

Query: 99  GYSTGGRGGSYGGGGGDKSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDS 158
           GYSTGGRGGSYGGGGGDKSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDS
Sbjct: 61  GYSTGGRGGSYGGGGGDKSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDS 120

Query: 159 DRGDRFAGDNNRYVDDRYEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGY 218
           DRGDRFAGDNNRYVDDRYEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGY
Sbjct: 121 DRGDRFAGDNNRYVDDRYEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGY 180

Query: 219 NNDSDRFPVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYR 278
           NNDSDRFPVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYR
Sbjct: 181 NNDSDRFPVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYR 240

Query: 279 NRPAPYDRPSRAGRPSSFDRY 299
           NRPAPYDRPSRAGRPSSFDRY
Sbjct: 241 NRPAPYDRPSRAGRPSSFDRY 261

[Close]

BLAST of MC09g1386 vs. ExPASy TrEMBL
Match: A0A1S3BGN5 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489439 PE=4 SV=1)

HSP 1 Score: 513 bits (1320), Expect = 2.21e-182
Identity = 266/302 (88.08%), Postives = 270/302 (89.40%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120
           MDDAIREMHGQE GERIISVNKAEPKMGED+DHGYRG GYSTGGRG SYGGGGGD+SARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRG-SYGGGGGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCHSVGGGRGRG-DSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
           DECFKCGRLGHWARDC SVGGGRGRG DSFLARSRLGD DRGDRFAGD NRYVDDRYEGG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180

Query: 181 -RFGDRDRFDSS-RDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYY 240
            RFGDRDRFDSS RDNKY SRDRYVSDRYPP GDRFGS  YNNDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFD 299
           RDG                 PRG+DKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSFD
Sbjct: 241 RDG-----------------PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFD 284

[Close]

BLAST of MC09g1386 vs. ExPASy TrEMBL
Match: A0A5D3CG30 (Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002430 PE=4 SV=1)

HSP 1 Score: 513 bits (1320), Expect = 2.21e-182
Identity = 266/302 (88.08%), Postives = 270/302 (89.40%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120
           MDDAIREMHGQE GERIISVNKAEPKMGED+DHGYRG GYSTGGRG SYGGGGGD+SARQ
Sbjct: 61  MDDAIREMHGQEFGERIISVNKAEPKMGEDMDHGYRGGGYSTGGRG-SYGGGGGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCHSVGGGRGRG-DSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
           DECFKCGRLGHWARDC SVGGGRGRG DSFLARSRLGD DRGDRFAGD NRYVDDRYEGG
Sbjct: 121 DECFKCGRLGHWARDCPSVGGGRGRGGDSFLARSRLGDGDRGDRFAGDTNRYVDDRYEGG 180

Query: 181 -RFGDRDRFDSS-RDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYY 240
            RFGDRDRFDSS RDNKY SRDRYVSDRYPP GDRFGS  YNNDSDRFPVNGYGKDRGYY
Sbjct: 181 GRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSGRYNNDSDRFPVNGYGKDRGYY 240

Query: 241 RDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFD 299
           RDG                 PRG+DKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSFD
Sbjct: 241 RDG-----------------PRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFD 284

[Close]

BLAST of MC09g1386 vs. ExPASy TrEMBL
Match: A0A6J1GY86 (glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458292 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 8.71e-172
Identity = 251/301 (83.39%), Postives = 258/301 (85.71%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MAGREEYRIFVGGLSWDITER LENAFSRFGKIIDSQIMLEKNTGR RGFGFITFSDRRG
Sbjct: 1   MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRG 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQ 120
           MDDAIREMHG+E GERIISVNKAEPKMGEDIDHGYRG               GGD+SARQ
Sbjct: 61  MDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRG---------------GGDRSARQ 120

Query: 121 DECFKCGRLGHWARDCHSVGGGRGRG-DSFLARSRLGDSDRGDRFAGDNNRYVDDRYEGG 180
           DECFKCGR GHWARDC SVGGGRGRG DSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGG
Sbjct: 121 DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGG 180

Query: 181 -RFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYGKDRGYYR 240
            RFGDRDRFD+SRD+KY +RDRYVS+RYPP GDRFGSS YNNDSDRFPVNGYGKDRG   
Sbjct: 181 GRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPVNGYGKDRG--- 240

Query: 241 DGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFDR 299
                        YYRDGGPRG+DKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSFDR
Sbjct: 241 -------------YYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR 270

[Close]

BLAST of MC09g1386 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-72
Identity = 173/324 (53.40%), Postives = 208/324 (64.20%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           MA +E  RIFVGGLS ++T+R LE AFSRFG I+D QIMLE++TGR RGFGFITF+DRR 
Sbjct: 1   MAAKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRA 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMGED--IDHGYRG---AGYSTGGRGGSYGGGGGD 120
           MD++IREMHG++ G+R+ISVN+AEPK+G D    HG RG   +GYS  G+G   GGGGG 
Sbjct: 61  MDESIREMHGRDFGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGG 120

Query: 121 KSARQDECFKCGRLGHWARDCHSVGGGRG---RGDSFLARSRLGDSDRGDRFAG-----D 180
               +DECFKCGR+GHWARDC S GGGRG    G S  A +  G   R DR+A      D
Sbjct: 121 GRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGFSSRASAYGGSDGRVDRYADRDRYVD 180

Query: 181 NNRYVDDRYEG-GRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRF-GSSGYNNDSDRF 240
             RY+DDRY+G  R+G RDRFDS     Y  RDRY SDRY    DRF G   Y+  SDR+
Sbjct: 181 RERYIDDRYDGAARYGARDRFDSR--EAYIPRDRYASDRYAAPADRFAGGDRYSRGSDRY 240

Query: 241 PVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPAR---DEGRSYRNRP- 300
           P   Y K R + RD  P    G DR     GG R      +GGP R   +EGR +R+R  
Sbjct: 241 PPGSYDKARSFERDIAP--SAGSDRY----GGGR------AGGPIRGGGEEGRGFRSRAG 300

[Close]

BLAST of MC09g1386 vs. TAIR 10
Match: AT1G60650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 254.6 bits (649), Expect = 9.9e-68
Identity = 162/315 (51.43%), Postives = 195/315 (61.90%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F R+GKI + QIM+ ++TGR RGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQELGERIISVNKAEPKM-GEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQD 122
           DAI+ MHG+ELG ++ISVNKAEPK+ GED+D   +G GYS+ G+G             +D
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKG------------TED 127

Query: 123 ECFKCGRLGHWARDCHSVGGGRGRGDSFLA-RSRLGDSD-RGDRFAGDN----------- 182
           ECFKC R GHWARDC S G  R R    LA RSR+GD D   DR+ GD            
Sbjct: 128 ECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLERERERERE 187

Query: 183 -NRYVDDR--YEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRF 242
            +RY+D R   +GGR+  RDRFDS   +KY  RD Y  +RY P GDRF S  Y       
Sbjct: 188 FDRYMDGRRDRDGGRYSYRDRFDSG--DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYD 300
                G++R Y RD            Y RD      D+YG  GP RDEGR YR+RP PYD
Sbjct: 248 ENEYRGRERSYDRDR-----------YARDTS----DRYGDMGPIRDEGRPYRSRPGPYD 292

[Close]

BLAST of MC09g1386 vs. TAIR 10
Match: AT1G60650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 254.6 bits (649), Expect = 9.9e-68
Identity = 162/315 (51.43%), Postives = 195/315 (61.90%), Query Frame = 0


Query: 3   GREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRGMD 62
           G  E RIFVGGLSWD+TERQLE+ F R+GKI + QIM+ ++TGR RGFGFITF+DRRG D
Sbjct: 8   GNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGAD 67

Query: 63  DAIREMHGQELGERIISVNKAEPKM-GEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQD 122
           DAI+ MHG+ELG ++ISVNKAEPK+ GED+D   +G GYS+ G+G             +D
Sbjct: 68  DAIKHMHGRELGNKVISVNKAEPKVGGEDVDQLKKGGGYSSRGKG------------TED 127

Query: 123 ECFKCGRLGHWARDCHSVGGGRGRGDSFLA-RSRLGDSD-RGDRFAGDN----------- 182
           ECFKC R GHWARDC S G  R R    LA RSR+GD D   DR+ GD            
Sbjct: 128 ECFKCRRPGHWARDCPSTGDDRERFRVPLAMRSRIGDIDGHRDRY-GDRDLERERERERE 187

Query: 183 -NRYVDDR--YEGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRF 242
            +RY+D R   +GGR+  RDRFDS   +KY  RD Y  +RY P GDRF S  Y       
Sbjct: 188 FDRYMDGRRDRDGGRYSYRDRFDSG--DKYEPRDHYPFERYAPPGDRFVSDRYGMPEHHL 247

Query: 243 PVNGYGKDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYD 300
                G++R Y RD            Y RD      D+YG  GP RDEGR YR+RP PYD
Sbjct: 248 ENEYRGRERSYDRDR-----------YARDTS----DRYGDMGPIRDEGRPYRSRPGPYD 292

[Close]

BLAST of MC09g1386 vs. TAIR 10
Match: AT3G26420.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-31
Identity = 109/300 (36.33%), Postives = 155/300 (51.67%), Query Frame = 0


Query: 1   MAGREEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRG 60
           M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ 
Sbjct: 1   MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60

Query: 61  MDDAIREMHGQELGERIISVNKAEPKMG-----EDIDHGYRGAGYSTGGRGGSYGGGGGD 120
           MD+AI  M+G +L  R I+V+KA+P  G      D D G R  GY       S G GGGD
Sbjct: 61  MDEAIAAMNGMDLDGRTITVDKAQPHQGGAGRDNDGDRG-RDRGYDRDRSRPSGGRGGGD 120

Query: 121 KSARQDECFKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGDRFAGDNNRY--VD 180
                  CFKCG+ GH+AR+C S                    D G RF+  ++RY   D
Sbjct: 121 -------CFKCGKPGHFARECPSE----------------SSRDGGGRFSSKDDRYSSKD 180

Query: 181 DRY--EGGRFGDRDRFDSSRDNKYASRDRYVSDRYPPSGDRFGSSGYNNDSDRFPVNGYG 240
           DRY  +  R+G ++    ++D++Y+S+D    DRY    DR+GS            + YG
Sbjct: 181 DRYGAKDDRYGAKEDRYGAKDDRYSSKD----DRYSSKDDRYGSRDGGG-------SRYG 240

Query: 241 KDRGYYRDGFPVNGYGKDRVYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRAG 292
            DR   R G      G+     RDGG RG      GG         R+  APYDRP   G
Sbjct: 241 PDRSGERAG------GRS----RDGGSRG----APGGE--------RHSRAPYDRPRAGG 243

[Close]

BLAST of MC09g1386 vs. TAIR 10
Match: AT4G39260.1 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 109.8 bits (273), Expect = 3.9e-24
Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = 0


Query: 6   EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMLEKNTGRRRGFGFITFSDRRGMDDAI 65
           EYR FVGGL+W   +  L+  FS+FG +IDS+I+ ++ +GR RGFGF+TF D + M DAI
Sbjct: 5   EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64

Query: 66  REMHGQELGERIISVNKAEPK--MGEDIDHGYRGAGYSTGGRGGSYGGGGGDKSARQDEC 125
            EM+G+EL  R+I+VN+A+ +   G     G  G GY +GG GG  GGGGG  S      
Sbjct: 65  EEMNGKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGGGGG 124

Query: 126 FKCGRLGHWARDCHSVGGGRGRGDSFLARSRLGDSDRGD 163
           ++    G+      S GGG GRG     R   G    GD
Sbjct: 125 YERRSGGY-----GSGGGGGGRGYGGGGRREGGGYGGGD 158

The following BLAST results are available for this feature:

BLAST of MC09g1386 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWN5	1.9e-71	53.40	Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE...	[more]
O22703	1.4e-66	51.43	Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana OX=3702 GN=RZ1B PE...	[more]
Q9LIN3	2.7e-30	36.33	Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana OX=3702 GN=RZ1A PE...	[more]
Q99070	1.9e-23	46.43	Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1	[more]
P49311	2.5e-23	46.15	Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba OX=3728 PE=2 SV=1	[more]

BLAST of MC09g1386 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139343.1	2.54e-219	100.00	glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]	[more]
XP_022139344.1	4.70e-190	100.00	glycine-rich RNA-binding protein RZ1C-like isoform X2 [Momordica charantia] >XP_...	[more]
XP_008446829.1	4.57e-182	88.08	PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo] ...	[more]
XP_038892830.1	1.03e-181	87.83	glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida]	[more]
XP_004142412.1	1.41e-181	87.42	glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus] >XP_011655869...	[more]

BLAST of MC09g1386 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFE7	1.23e-219	100.00	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Momordica charantia OX=...	[more]
A0A6J1CCP3	2.28e-190	100.00	glycine-rich RNA-binding protein RZ1C-like isoform X2 OS=Momordica charantia OX=...	[more]
A0A1S3BGN5	2.21e-182	88.08	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3CG30	2.21e-182	88.08	Glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A6J1GY86	8.71e-172	83.39	glycine-rich RNA-binding protein RZ1C-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of MC09g1386 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04280.1	1.3e-72	53.40	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT1G60650.1	9.9e-68	51.43	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT1G60650.2	9.9e-68	51.43	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT3G26420.1	1.9e-31	36.33	RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like...	[more]
AT4G39260.1	3.9e-24	43.40	cold, circadian rhythm, and RNA binding 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 122..138 e-value: 6.7E-4 score: 29.0
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 122..136 e-value: 1.7E-6 score: 27.8
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 123..136 score: 10.509824
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 e-value: 5.9E-28 score: 108.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..78 e-value: 5.4E-20 score: 71.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..85 score: 19.638327
None	No IPR available	GENE3D	4.10.60.10		coord: 118..147 e-value: 7.0E-7 score: 30.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..282
None	No IPR available	PANTHER	PTHR15241:SF294	GLYCINE-RICH RNA-BINDING PROTEIN RZ1B-LIKE	coord: 1..243
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 1..243
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..117 e-value: 5.9E-30 score: 106.2
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..115
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 103..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g1386.1	MC09g1386.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding