MC03g0827.1 (mRNA) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.AACACCTCTCTCACACTACAAATCATCTCTCTCTATATATTCAAAGCGATTGATCATCAAAGGGGGGAAAATGTGGCTGTTTAGACTATTTCTGGTTTTGCTGAGTTTTGCTTTCCTGGTTCTCCCCAGTGCTCAAGCATGGAGCAAAGAAGGCCACGTTCTAACATGCCAAATTGCACAGGTAACTTGAACAACAAACTTATAAAAATGGATAACATAATTCAATTCACTCGAATTAATATGCTCTCTGTTTTGTTTTAAATACAGGGCCTCCTGAATCCAGACGCAACAGAGGCCGTCCAAAATTTACTACCGGAAAATGTCGACGGAAACCTGTCGGCGTTGTGTGTTTGGCCGGACCAAATCCGACATTGGTATCGGTATCGCTGGACCAGTCCTCTTCACTTCATTGACACGCCCGATAATTCCTGTTCTTTCCTCTACACGAGTAACCATTTTTTCTTCTCTCTTTCATCAAACAATCTTGTCCATTTTTTATTCTTTGGATTTTTAATTGGTGGCTGTTTATAGGAGATTGCCACGACAACGGCGGCGTCGAGAACATGTGCGTCGCCGGCGCCGTTCGCAATTTCACCACTCAGCTCGCGCACTACGCAGAAGGGGGCTCCGATCGTCGACGTAATTAACCCGACCCGGCTCCGGTCCAAACCCGATTTGTTTTATTTTACTTAAACCCGATTATTTTTTTTGAAGACGACGATTTTTCATGGTTACTGCAGATAACTTGACCGGGGCGTTATTATTTCTATCGCACTTCCTTGGGGATATTCATCAGGTAAATAAAATATTGATTAAAATATTAAATAATCTAATTTAGTCCATTTAATTTGAAAAACTCCATTTCTCAAAAAAAAAAAAAAAAAAAAAATCCAATTTGATCTTTATTTGAGCTGAATTTTATGTTGTTCTCTGTAATTTAAAACCTCTTAATTTAGTATGCAGATCAAACTTTACAAATTATTTCCATTATACCATATTGAATACGAGTTAATGATTGGTATTTTATTTGAATTATTATATTAATTAATCGTGTCGGCTTAAAGATAAGTGAAATGTAAGTGTATTATCCAATAAATTTTTAGATATATCAGAACAAACTAAAATTTTTAAAATTATAGAGGCCACCCTTAAAAAAGTTTGAATAGCAAAAGAAATTTTATCCTCCGACTCCTCTATTTGATGAGATAGTCATTTTCCTTCTTAGTTTTTTTAATCTTTAACGAACAACTAATAATCAAAGGTAGTTTATGTAGTTTTTGAAAGAAAGAAGAGGTACATCGAAATTAATGAAACTAAAACTATAAGAAGTGAAAGGAGTAATTTAACCTAAAATGTCTATATCGATATGAAAAATTTTAATTAATTATCCGAGTGTAATTGTAAATTACAATTAACCCGGTGGTTTTACATCCAGCCAATGCACGTGGGGTTCACGAGCGACGAGGGAGGGAACACCATAAACTTACGGTGGTACCGCCACAAGTCCAATCTACACCACGTAAGCCCTAAGAAATAATTTAGACTTATAGCTTGAAATTAATTAATTATGACAATTCTTACTAATTAGGGAAAAAAAAAAAAACCACTGACGCAGGTGTGGGATAGGGAGATTATTCTCACAGCTCTAGCAGATTATTACGACAAGGACTCGGGCCTCCTCCTACAAGACATACAAAGGAATTTGACCCATGTAATTAATATAATTTATTTTACATTAATTAGGATAATATATATTAGTTTATAAGCTCATTTTTTAATACTAACTCAATTCTTGTAGGGAATTTGGACCCATGAGATTCCAACATGGCAGCATTGCGAAGATCTTGATTCATGCGTAAACAAGTATATGTTTATTTATATATTTGATCTCTCTATTTTAATTTTTTTCTCTCTAAATAATGCTTCATTTTTTCCTTTTTTTTAATGGAGGTGGGCTGAGGAGAGTATAAGCTTAGCTTGCAAGTGGGGTTATGAAGGAGTTGAGGCTGGTACAACTTTAGCAGGTAAATCTAATCAAACTTAAATTAATGGTCTTTCTTTAGTATAATAATAGGAAAGTAGATTTAAATTCACGATTTCTTGGTTGGTTCGGAATATATATGTCTGTTCAAATAGGCTAAATTAAGTTCCTTAATTATAACATAAATAATGAAGAATCAATAATCAAATTAAGTCCATTATTGGTTCTCTATTTATTTTAATAATGGATTAGTTATACTAAGTCTTCAATAATGAAGAATCAATATTCAAATTAGGCCCATTACCTGTCCTCTATTCATCTTAATAATGGGTTGGTTATACTGAAGTATTTTTTATATTTAGGGGCCTGCTTTAGATTATTTTGTTTTTAAAAAAACTGGATTTGTTTGTTAACATTTTATTTGTCTCACAGTCCATATTTAGAATAATTGTGAAAAATTATAAGAAATACTATAATGTTTTATGTTCACTTTTCAATTTGAAAAAAAGAAATTAAGTTTATTACATTATTCAGTTTATCGCTTTTGTATTTCATTTTTCGGGAACATTTTTGAAGTTTAATCAAAATATTAAAACATAAACACATTTTAAAAACTATCTTGTCAAGTTTTAAAAGATCTAGATATGGCCAATTTGAAAACATTAAGAAAAGGAACAAAATGAATATAGTAAAGTATACATTTCCAATAAAAAACAACAGTATCTATCAGGAAAAATATGGAGCAGTTTTTCTAAAATAATTTGGGTAGCTAATTAAGAGATAATATTCTCTAAATTTTTTTTTAAAAAAAGCTAATTAAGAGATGATAAATCTCTAACCAATGTGATTTTTGGGCAGAGGATTACTTCGATTCAAGGATGCCAATAGTGATGAAACGCATTGCTGAAGGTGGAGTCCGGTTGGCCATGCTTTTGAACCGGGTTTTTTCTGATGGAGGAGGAGGATTCGCCTCCTCAACTTGATTATTAATCCGACCGCTACATTTAATATAATATTAGCCAACAAAAACTCTCTCTTCTGTTTTTATGTTTATAAAATTAAATTTCTTTCTTTATTTCTGTAACATAGTAGTAGCAAATGCAGTAGAATCAGTTTATTACGTTTAAATCGTAGATTTGAATTCTCTCCACTTAATTTGTAATGTTATATTGTAAAGAAGAAATCTAACGATCATTGACTAACAATCTTGTTGAATGAGAAATTTCGGCTAATTACTAAAGGTCACGTCACAAAATTAAAATTACATTTAGGACCAATGACAAATTTACACGTGTCCTAAGTTAATTTTTAAATCGACGAATCAAATTGTGTCACATGTCCCTCTTATGGTTGTCCGATGAAATCAACTAATTGTATCAAAACCAGACTGGGTCCAAGCACTATAAATAGAGGGGTCACCTCTATTTGAAAGAAGGAGAAGAAGGATTGGGAAAGATCAAGAAGCATTGGAGATTCAGAGCATTCGGAGCATTTACAACCGTTCAAAGTGCGAAGCATCCAGAACCAACAAGACTCGATGAACTGAAGACTCGAAGAACGGAAGACTCGAAGACTACGAGACTTCAAGAATTCTAAATCTTCTCTTCGCCAAGCAACCGGCCGAAGAACTTCACAAGCTACAAGCCGAAGACTTCATCAACCTACAAACTTTGCCAAGCATCAAGCTTCACAGCCGAAACTCTAAAGATTCTTCAATACGCTCGAATCTGAAGGTGCAAACTCATTGTGAGAACAAGCTCACAAGCCCT AACACCTCTCTCACACTACAAATCATCTCTCTCTATATATTCAAAGCGATTGATCATCAAAGGGGGGAAAATGTGGCTGTTTAGACTATTTCTGGTTTTGCTGAGTTTTGCTTTCCTGGTTCTCCCCAGTGCTCAAGCATGGAGCAAAGAAGGCCACGTTCTAACATGCCAAATTGCACAGGGCCTCCTGAATCCAGACGCAACAGAGGCCGTCCAAAATTTACTACCGGAAAATGTCGACGGAAACCTGTCGGCGTTGTGTGTTTGGCCGGACCAAATCCGACATTGGTATCGGTATCGCTGGACCAGTCCTCTTCACTTCATTGACACGCCCGATAATTCCTGTTCTTTCCTCTACACGAGAGATTGCCACGACAACGGCGGCGTCGAGAACATGTGCGTCGCCGGCGCCGTTCGCAATTTCACCACTCAGCTCGCGCACTACGCAGAAGGGGGCTCCGATCGTCGACATAACTTGACCGGGGCGTTATTATTTCTATCGCACTTCCTTGGGGATATTCATCAGCCAATGCACGTGGGGTTCACGAGCGACGAGGGAGGGAACACCATAAACTTACGGTGGTACCGCCACAAGTCCAATCTACACCACGTGTGGGATAGGGAGATTATTCTCACAGCTCTAGCAGATTATTACGACAAGGACTCGGGCCTCCTCCTACAAGACATACAAAGGAATTTGACCCATGGAATTTGGACCCATGAGATTCCAACATGGCAGCATTGCGAAGATCTTGATTCATGCGTAAACAAGTGGGCTGAGGAGAGTATAAGCTTAGCTTGCAAGTGGGGTTATGAAGGAGTTGAGGCTGGTACAACTTTAGCAGAGGATTACTTCGATTCAAGGATGCCAATAGTGATGAAACGCATTGCTGAAGGTGGAGTCCGGTTGGCCATGCTTTTGAACCGGGTTTTTTCTGATGGAGGAGGAGGATTCGCCTCCTCAACTTGATTATTAATCCGACCGCTACATTTAATATAATATTAGCCAACAAAAACTCTCTCTTCTGTTTTTATGTTTATAAAATTAAATTTCTTTCTTTATTTCTGTAACATAGTAGTAGCAAATGCAGTAGAATCAGTTTATTACGTTTAAATCGTAGATTTGAATTCTCTCCACTTAATTTGTAATGTTATATTGTAAAGAAGAAATCTAACGATCATTGACTAACAATCTTGTTGAATGAGAAATTTCGGCTAATTACTAAAGGTCACGTCACAAAATTAAAATTACATTTAGGACCAATGACAAATTTACACGTGTCCTAAGTTAATTTTTAAATCGACGAATCAAATTGTGTCACATGTCCCTCTTATGGTTGTCCGATGAAATCAACTAATTGTATCAAAACCAGACTGGGTCCAAGCACTATAAATAGAGGGGTCACCTCTATTTGAAAGAAGGAGAAGAAGGATTGGGAAAGATCAAGAAGCATTGGAGATTCAGAGCATTCGGAGCATTTACAACCGTTCAAAGTGCGAAGCATCCAGAACCAACAAGACTCGATGAACTGAAGACTCGAAGAACGGAAGACTCGAAGACTACGAGACTTCAAGAATTCTAAATCTTCTCTTCGCCAAGCAACCGGCCGAAGAACTTCACAAGCTACAAGCCGAAGACTTCATCAACCTACAAACTTTGCCAAGCATCAAGCTTCACAGCCGAAACTCTAAAGATTCTTCAATACGCTCGAATCTGAAGGTGCAAACTCATTGTGAGAACAAGCTCACAAGCCCT ATGTGGCTGTTTAGACTATTTCTGGTTTTGCTGAGTTTTGCTTTCCTGGTTCTCCCCAGTGCTCAAGCATGGAGCAAAGAAGGCCACGTTCTAACATGCCAAATTGCACAGGGCCTCCTGAATCCAGACGCAACAGAGGCCGTCCAAAATTTACTACCGGAAAATGTCGACGGAAACCTGTCGGCGTTGTGTGTTTGGCCGGACCAAATCCGACATTGGTATCGGTATCGCTGGACCAGTCCTCTTCACTTCATTGACACGCCCGATAATTCCTGTTCTTTCCTCTACACGAGAGATTGCCACGACAACGGCGGCGTCGAGAACATGTGCGTCGCCGGCGCCGTTCGCAATTTCACCACTCAGCTCGCGCACTACGCAGAAGGGGGCTCCGATCGTCGACATAACTTGACCGGGGCGTTATTATTTCTATCGCACTTCCTTGGGGATATTCATCAGCCAATGCACGTGGGGTTCACGAGCGACGAGGGAGGGAACACCATAAACTTACGGTGGTACCGCCACAAGTCCAATCTACACCACGTGTGGGATAGGGAGATTATTCTCACAGCTCTAGCAGATTATTACGACAAGGACTCGGGCCTCCTCCTACAAGACATACAAAGGAATTTGACCCATGGAATTTGGACCCATGAGATTCCAACATGGCAGCATTGCGAAGATCTTGATTCATGCGTAAACAAGTGGGCTGAGGAGAGTATAAGCTTAGCTTGCAAGTGGGGTTATGAAGGAGTTGAGGCTGGTACAACTTTAGCAGAGGATTACTTCGATTCAAGGATGCCAATAGTGATGAAACGCATTGCTGAAGGTGGAGTCCGGTTGGCCATGCTTTTGAACCGGGTTTTTTCTGATGGAGGAGGAGGATTCGCCTCCTCAACTTGA MWLFRLFLVLLSFAFLVLPSAQAWSKEGHVLTCQIAQGLLNPDATEAVQNLLPENVDGNLSALCVWPDQIRHWYRYRWTSPLHFIDTPDNSCSFLYTRDCHDNGGVENMCVAGAVRNFTTQLAHYAEGGSDRRHNLTGALLFLSHFLGDIHQPMHVGFTSDEGGNTINLRWYRHKSNLHHVWDREIILTALADYYDKDSGLLLQDIQRNLTHGIWTHEIPTWQHCEDLDSCVNKWAEESISLACKWGYEGVEAGTTLAEDYFDSRMPIVMKRIAEGGVRLAMLLNRVFSDGGGGFASST Homology
BLAST of MC03g0827.1 vs. ExPASy Swiss-Prot
Match: Q9SXA6 (Endonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=ENDO1 PE=1 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 5.7e-121 Identity = 190/286 (66.43%), Postives = 239/286 (83.57%), Query Frame = 0
BLAST of MC03g0827.1 vs. ExPASy Swiss-Prot
Match: F4JJL0 (Endonuclease 4 OS=Arabidopsis thaliana OX=3702 GN=ENDO4 PE=1 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 4.9e-88 Identity = 142/275 (51.64%), Postives = 197/275 (71.64%), Query Frame = 0
BLAST of MC03g0827.1 vs. ExPASy Swiss-Prot
Match: Q9C9G4 (Endonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=ENDO2 PE=1 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.2e-80 Identity = 134/284 (47.18%), Postives = 194/284 (68.31%), Query Frame = 0
BLAST of MC03g0827.1 vs. ExPASy Swiss-Prot
Match: F4JJL3 (Endonuclease 5 OS=Arabidopsis thaliana OX=3702 GN=ENDO5 PE=1 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 4.6e-78 Identity = 134/288 (46.53%), Postives = 192/288 (66.67%), Query Frame = 0
BLAST of MC03g0827.1 vs. ExPASy Swiss-Prot
Match: Q8LDW6 (Endonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=ENDO3 PE=1 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 3.6e-75 Identity = 131/290 (45.17%), Postives = 187/290 (64.48%), Query Frame = 0
BLAST of MC03g0827.1 vs. NCBI nr
Match: XP_022140160.1 (endonuclease 1 [Momordica charantia]) HSP 1 Score: 637 bits (1642), Expect = 1.04e-229 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of MC03g0827.1 vs. NCBI nr
Match: XP_020221420.1 (endonuclease 1 [Cajanus cajan] >KYP63013.1 Nuclease PA3 [Cajanus cajan]) HSP 1 Score: 498 bits (1283), Expect = 4.75e-176 Identity = 221/293 (75.43%), Postives = 260/293 (88.74%), Query Frame = 0
BLAST of MC03g0827.1 vs. NCBI nr
Match: XP_023000814.1 (endonuclease 1 [Cucurbita maxima]) HSP 1 Score: 494 bits (1273), Expect = 1.14e-174 Identity = 229/299 (76.59%), Postives = 261/299 (87.29%), Query Frame = 0
BLAST of MC03g0827.1 vs. NCBI nr
Match: NP_001235325.1 (endonuclease [Glycine max] >ABP68856.1 endonuclease [Glycine max]) HSP 1 Score: 493 bits (1269), Expect = 6.44e-174 Identity = 218/293 (74.40%), Postives = 256/293 (87.37%), Query Frame = 0
BLAST of MC03g0827.1 vs. NCBI nr
Match: XP_028203080.1 (endonuclease 1-like [Glycine soja] >KAG4948408.1 hypothetical protein JHK86_041647 [Glycine max] >KAG4945541.1 hypothetical protein JHK87_041548 [Glycine soja] >KAG5104622.1 hypothetical protein JHK82_041592 [Glycine max] >KAG5115746.1 hypothetical protein JHK84_041859 [Glycine max] >KRH10768.1 hypothetical protein GLYMA_15G068600v4 [Glycine max]) HSP 1 Score: 492 bits (1267), Expect = 1.30e-173 Identity = 218/293 (74.40%), Postives = 255/293 (87.03%), Query Frame = 0
BLAST of MC03g0827.1 vs. ExPASy TrEMBL
Match: A0A6J1CEC2 (Aspergillus nuclease S(1) OS=Momordica charantia OX=3673 GN=LOC111010892 PE=3 SV=1) HSP 1 Score: 637 bits (1642), Expect = 5.01e-230 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of MC03g0827.1 vs. ExPASy TrEMBL
Match: A0A151T7J6 (Aspergillus nuclease S(1) OS=Cajanus cajan OX=3821 GN=KK1_017575 PE=3 SV=1) HSP 1 Score: 498 bits (1283), Expect = 2.30e-176 Identity = 221/293 (75.43%), Postives = 260/293 (88.74%), Query Frame = 0
BLAST of MC03g0827.1 vs. ExPASy TrEMBL
Match: A0A6J1KL07 (Aspergillus nuclease S(1) OS=Cucurbita maxima OX=3661 GN=LOC111495151 PE=3 SV=1) HSP 1 Score: 494 bits (1273), Expect = 5.53e-175 Identity = 229/299 (76.59%), Postives = 261/299 (87.29%), Query Frame = 0
BLAST of MC03g0827.1 vs. ExPASy TrEMBL
Match: A5A338 (Aspergillus nuclease S(1) OS=Glycine max OX=3847 GN=EN1 PE=2 SV=1) HSP 1 Score: 493 bits (1269), Expect = 3.12e-174 Identity = 218/293 (74.40%), Postives = 256/293 (87.37%), Query Frame = 0
BLAST of MC03g0827.1 vs. ExPASy TrEMBL
Match: I1MEB5 (Aspergillus nuclease S(1) OS=Glycine max OX=3847 GN=GLYMA_15G068600 PE=3 SV=1) HSP 1 Score: 492 bits (1267), Expect = 6.29e-174 Identity = 218/293 (74.40%), Postives = 255/293 (87.03%), Query Frame = 0
BLAST of MC03g0827.1 vs. TAIR 10
Match: AT1G11190.1 (bifunctional nuclease i ) HSP 1 Score: 435.3 bits (1118), Expect = 4.1e-122 Identity = 190/286 (66.43%), Postives = 239/286 (83.57%), Query Frame = 0
BLAST of MC03g0827.1 vs. TAIR 10
Match: AT4G21585.1 (endonuclease 4 ) HSP 1 Score: 325.9 bits (834), Expect = 3.5e-89 Identity = 142/275 (51.64%), Postives = 197/275 (71.64%), Query Frame = 0
BLAST of MC03g0827.1 vs. TAIR 10
Match: AT1G68290.1 (endonuclease 2 ) HSP 1 Score: 300.4 bits (768), Expect = 1.6e-81 Identity = 134/284 (47.18%), Postives = 194/284 (68.31%), Query Frame = 0
BLAST of MC03g0827.1 vs. TAIR 10
Match: AT4G21600.1 (endonuclease 5 ) HSP 1 Score: 292.7 bits (748), Expect = 3.3e-79 Identity = 134/288 (46.53%), Postives = 192/288 (66.67%), Query Frame = 0
BLAST of MC03g0827.1 vs. TAIR 10
Match: AT4G21590.1 (endonuclease 3 ) HSP 1 Score: 283.1 bits (723), Expect = 2.6e-76 Identity = 131/290 (45.17%), Postives = 187/290 (64.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following utr3 feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following utr5 feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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