Lsi02G005970.1 (mRNA) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCAACATTTACTAAACAAATTCATAGTTGTTCAATGCAATAATTAAACTGCACGTTATCAGATTCATCTCCACTGCACTTTTTGGTCTTTGGTCTGAACTTAAACCAGTTGAGCTATGTTCAAGTTAACATCCCCACTTAATTTATCCAAATTAGTTTTGAAAAGGCTTATAAATCTCCTTTTTTTTTTCTTTTCATTATCTGTAAAGTGTAAACTTGGTGACAGAAGAACAGAGAACATATGGCAGAGACTAAACCTGTAGCTCCTGATGGAGATGACCAGTTATTGGAATGGCCCAAGAAAGATAATCGCCGCTTTCTTCGTGCTGTCTATCGTGTCGGTGATCTCGATCGCACCATCAAGTATATCTTCTTCAATCTTACTCTAAATCTCTGTCTTCTCTCCTTCTTTATGGCAATGCATTTTCTATCTTCAGATTCTACACTAAATGCTTTGGAATGAAACTCCTGAGAAAAGTTGATATCCCAGAAAAGAAACTTACCAAAGTATTCATGGGGTTTGGCCCTGAGCAATCTTCATTCGTTCTCGAGTTGATTAACGGTATGTGGTTTTAATAAGAGTAATACTTAACTGCTAGCTAGACTGCAGTTATTTTCTACGCAGGGTGCCACGTGACAAACTTTTGAAAAACTAGTAGTCCAAGTATTGCTTTTTTAAGAATGTGTCTGAATCAAGTTATAATCTCTTATCTTGTTCCTTTTATCAATCCAAACTCATATTCAAAATATGCAGAACATGGGGTAACTTCATATGATATTGGCACTGGATTTGGACATTTTGCCATTGCTACTCAAGATGTGAGTGAAGCCAATTTCTTCATGGTTTTGGTTTTTTTTTCCCCTGCAAATTGAGATGAAGAATATTAACATCAAATTTTTGTTATTTTTCCAAGATCTACAAAATGGTTGAAAATGTTAAGGCCAAGGGTGGTGACAATATGATCATTAGAGAACCTTTTGAGGTGAAAGGAAGCTCCATTTTTGTGCTGGCCTATGTGAAAGATCCTGATGGTTATATCTTTGAGCTCATTCAAAGAGGCCCCACTCCTCAGCCACTCTGCCAAGTAATGCTTCGTGTTGGTGATTTACAACGATCTATCGACTTCTATCAGAGGGTAAAATCACAGATTGCAGTAATTTTCAGTTTAAGTAAACAAAAAAGTTACCATGTAAACACACATTCAATTTTCAGTTAAAAAGAATAAATAATACTTCTAGTCCTAACTTCTATGAAACTAATAATTTAATCCATGAACTTTAGTTTGAAACAATTTAGTTTTGTACTTTCATATTTTCAGCAATTTCCTTGAAGTCTAGCATATTTGTAACAATTTAATCTTTACTATGAAAGTTTTCATCAAAATGAAGGGTTATTTTTTATTATGTAATAATTTAATCTGTGTAGTTCAAGACTAAATTGTTATTTTCACGAAGTTTAGAGACCAGAAGTAGTTTTTAACTCCAAAAAATGGTAAAAAAGTCGACGTTATTAGAAGTTTGTTAAATTTCAATGATGATGGGAGTTTCTCATGAAAATGTTAACAAAACAAAACATAAAAAAGACCATCATTTACTGTCTTTCTTCTGTGCTACTAACATCTCATTTAATCACCATTTGGTTTTTGATTTTTGAGTTTTTTAAAACTAAACTTATAAACACTAATTTCACCTATTAATTTCTTTGTTTAAAAAACTAAAAGGGGTAGTTTTTAAAAACTTGTCTTTGTCATTGAAATTTGGCCAAGAAATCAAATGGTTTATTAAGAAAGATGAAAACTATTTTAAAGAAGTTGCAAGTGAACAAGCACAATTTTCAAAAAAACTAAATTGTTATCAAACGAGGCATAAGAAATTCTCGATCCTGAATCAGAATTTGTTTCCATACAGGCATTGGGAATGAGGGTACTTAACAAGGTTGAGAGTCTTGAACACAAGGTGAACTTTTACTTCCATCCATCTTAAGAACTGAAGGTTAATAAATGCTATAATTTTCAATGAACAAACAATTGAATTTGCAGTACGCCATAGCCATGATGGGGTATGCAGATGAGTTAGAGACAACTGCTCTGGAGTTGACTTACAATCATGGTGTGACAGAACATTCCAAGGGAAATGGATATTCCCAGGTCAACTTTTGTTAGGGGGTTCAATTTTCCTCTTAAGTTGGAGTTTGTCCTTGATTAAGAACCACTAATTTCCATACTAATGGTAAATTTTGGTTTTGATTTCAGGTTGCTATTGGCACTGATGATGTATACCAGAGTGCTGAGGTTGTTAATTTCATTACCAAAGAACTTGGAGGAAAGATAACCCAACAACCCAGTTTGGCTAGCCAAACCAACTCCAAGATTACCAGTTTTCTTGATCCTGATGGCTGGAAAATTGTGAGTTTTCCTTCCTCATATAAGATGATAAGATCAAATACTATTCTAAATCCGTCACACACTTCCAAGTCCTAATTTTTCGTTTGAAATTATAAAGGATTACTTTCAAGTAACTTGTGGGTTTTTGGTAAATTTGTTTACTTGTTTTGTCATGTTCAAGTAGTGCTTAAAACCAAGGTTTTCTCTTTTAGGTCCTAATTGACAATGAAGATTATCTGAAGGAACCGCAGTGAAGAAGGGTATTGACAGTGTAAACCTGATGTTGATTCTCTATTGAATGTTATACAATAAACAGCTTAAATATTTTCATCAATATCTATATGCAGCTGTCTGAGACTCTCTGAGTTATATAATTATAGTTCTTCTAGCTACTTTAAACCAAGAATGCAAGTGCAATATGCAAAAGTAAACAGCTTAAATGAAATATGCTTAAGGCAGACAATGGACTCATTGGCAACCAAAAACAGCTTTAAACTGCCTGGGATGTGAGATTTTGTTACTTTTTTTTTTTTCACTTCAAAAATTAACTCTATGTACATTTGTGACGAGAAGAATGTCTATAAGTGTTGTTACCTGAAGTGAAACTAGACTTTGAAGCCATCAGTATGAGAAGCAAAAGAAC GTCCAACATTTACTAAACAAATTCATAGTTGTTCAATGCAATAATTAAACTGCACGTTATCAGATTCATCTCCACTGCACTTTTTGGTCTTTGGTCTGAACTTAAACCATGTAAACTTGGTGACAGAAGAACAGAGAACATATGGCAGAGACTAAACCTGTAGCTCCTGATGGAGATGACCAGTTATTGGAATGGCCCAAGAAAGATAATCGCCGCTTTCTTCGTGCTGTCTATCGTGTCGGTGATCTCGATCGCACCATCAAATTCTACACTAAATGCTTTGGAATGAAACTCCTGAGAAAAGTTGATATCCCAGAAAAGAAACTTACCAAAGTATTCATGGGGTTTGGCCCTGAGCAATCTTCATTCGTTCTCGAGTTGATTAACGAACATGGGGTAACTTCATATGATATTGGCACTGGATTTGGACATTTTGCCATTGCTACTCAAGATGCCAAGGGTGGTGACAATATGATCATTAGAGAACCTTTTGAGGTGAAAGGAAGCTCCATTTTTGTGCTGGCCTATGTGAAAGATCCTGATGGTTATATCTTTGAGCTCATTCAAAGAGGCCCCACTCCTCAGCCACTCTGCCAAGTAATGCTTCGTGTTGGTGATTTACAACGATCTATCGACTTCTATCAGAGGTACGCCATAGCCATGATGGGGTATGCAGATGAGTTAGAGACAACTGCTCTGGAGTTGACTTACAATCATGGTGTGACAGAACATTCCAAGGGAAATGGATATTCCCAGGTTGCTATTGGCACTGATGATGTATACCAGAGTGCTGAGGTCCTAATTGACAATGAAGATTATCTGAAGGAACCGCAGTGAAGAAGGGTATTGACAGTGTAAACCTGATGTTGATTCTCTATTGAATGTTATACAATAAACAGCTTAAATATTTTCATCAATATCTATATGCAGCTGTCTGAGACTCTCTGAGTTATATAATTATAGTTCTTCTAGCTACTTTAAACCAAGAATGCAAGTGCAATATGCAAAAGTAAACAGCTTAAATGAAATATGCTTAAGGCAGACAATGGACTCATTGGCAACCAAAAACAGCTTTAAACTGCCTGGGATGTGAGATTTTGTTACTTTTTTTTTTTTCACTTCAAAAATTAACTCTATGTACATTTGTGACGAGAAGAATGTCTATAAGTGTTGTTACCTGAAGTGAAACTAGACTTTGAAGCCATCAGTATGAGAAGCAAAAGAAC ATGGCAGAGACTAAACCTGTAGCTCCTGATGGAGATGACCAGTTATTGGAATGGCCCAAGAAAGATAATCGCCGCTTTCTTCGTGCTGTCTATCGTGTCGGTGATCTCGATCGCACCATCAAATTCTACACTAAATGCTTTGGAATGAAACTCCTGAGAAAAGTTGATATCCCAGAAAAGAAACTTACCAAAGTATTCATGGGGTTTGGCCCTGAGCAATCTTCATTCGTTCTCGAGTTGATTAACGAACATGGGGTAACTTCATATGATATTGGCACTGGATTTGGACATTTTGCCATTGCTACTCAAGATGCCAAGGGTGGTGACAATATGATCATTAGAGAACCTTTTGAGGTGAAAGGAAGCTCCATTTTTGTGCTGGCCTATGTGAAAGATCCTGATGGTTATATCTTTGAGCTCATTCAAAGAGGCCCCACTCCTCAGCCACTCTGCCAAGTAATGCTTCGTGTTGGTGATTTACAACGATCTATCGACTTCTATCAGAGGTACGCCATAGCCATGATGGGGTATGCAGATGAGTTAGAGACAACTGCTCTGGAGTTGACTTACAATCATGGTGTGACAGAACATTCCAAGGGAAATGGATATTCCCAGGTTGCTATTGGCACTGATGATGTATACCAGAGTGCTGAGGTCCTAATTGACAATGAAGATTATCTGAAGGAACCGCAGTGA MAETKPVAPDGDDQLLEWPKKDNRRFLRAVYRVGDLDRTIKFYTKCFGMKLLRKVDIPEKKLTKVFMGFGPEQSSFVLELINEHGVTSYDIGTGFGHFAIATQDAKGGDNMIIREPFEVKGSSIFVLAYVKDPDGYIFELIQRGPTPQPLCQVMLRVGDLQRSIDFYQRYAIAMMGYADELETTALELTYNHGVTEHSKGNGYSQVAIGTDDVYQSAEVLIDNEDYLKEPQ Homology
BLAST of Lsi02G005970.1 vs. ExPASy Swiss-Prot
Match: O65398 (Lactoylglutathione lyase GLX1 OS=Arabidopsis thaliana OX=3702 GN=GLX1 PE=1 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 4.6e-78 Identity = 147/231 (63.64%), Postives = 174/231 (75.32%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. ExPASy Swiss-Prot
Match: Q39366 (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera OX=178616 PE=2 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.3e-77 Identity = 144/230 (62.61%), Postives = 175/230 (76.09%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. ExPASy Swiss-Prot
Match: Q948T6 (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica OX=39947 GN=GLYI-11 PE=1 SV=2) HSP 1 Score: 286.2 bits (731), Expect = 3.3e-76 Identity = 144/237 (60.76%), Postives = 174/237 (73.42%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. ExPASy Swiss-Prot
Match: Q8W593 (Probable lactoylglutathione lyase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g67280 PE=1 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 5.5e-71 Identity = 135/233 (57.94%), Postives = 161/233 (69.10%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. ExPASy Swiss-Prot
Match: Q9KT93 (Probable lactoylglutathione lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=gloA PE=3 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23 Identity = 57/127 (44.88%), Postives = 74/127 (58.27%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. ExPASy TrEMBL
Match: A0A5D3BI05 (Glyoxalase I OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005690 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.9e-99 Identity = 182/245 (74.29%), Postives = 203/245 (82.86%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. ExPASy TrEMBL
Match: E5GC58 (Glyoxalase I OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.9e-99 Identity = 182/245 (74.29%), Postives = 203/245 (82.86%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. ExPASy TrEMBL
Match: A0A1S3B2D8 (Glyoxalase I OS=Cucumis melo OX=3656 GN=LOC103485234 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.9e-99 Identity = 182/245 (74.29%), Postives = 203/245 (82.86%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. ExPASy TrEMBL
Match: A0A0A0LS05 (Glyoxalase I OS=Cucumis sativus OX=3659 GN=Csa_1G062880 PE=3 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 6.3e-94 Identity = 177/241 (73.44%), Postives = 197/241 (81.74%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. ExPASy TrEMBL
Match: A0A6J1CEU9 (Lactoylglutathione lyase OS=Momordica charantia OX=3673 GN=LOC111010851 PE=3 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 3.1e-93 Identity = 190/292 (65.07%), Postives = 205/292 (70.21%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. NCBI nr
Match: XP_038895603.1 (LOW QUALITY PROTEIN: lactoylglutathione lyase GLX1 [Benincasa hispida]) HSP 1 Score: 385.2 bits (988), Expect = 4.0e-103 Identity = 202/294 (68.71%), Postives = 216/294 (73.47%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. NCBI nr
Match: XP_008440988.1 (PREDICTED: putative lactoylglutathione lyase [Cucumis melo] >ADN34057.1 lactoylglutathione lyase [Cucumis melo subsp. melo] >KAA0056849.1 putative lactoylglutathione lyase [Cucumis melo var. makuwa] >TYJ99352.1 putative lactoylglutathione lyase [Cucumis melo var. makuwa]) HSP 1 Score: 371.3 bits (952), Expect = 6.0e-99 Identity = 182/245 (74.29%), Postives = 203/245 (82.86%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. NCBI nr
Match: XP_004145118.1 (lactoylglutathione lyase GLX1 [Cucumis sativus] >KGN64513.1 hypothetical protein Csa_013535 [Cucumis sativus]) HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93 Identity = 177/241 (73.44%), Postives = 197/241 (81.74%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. NCBI nr
Match: XP_022140116.1 (putative lactoylglutathione lyase [Momordica charantia]) HSP 1 Score: 351.3 bits (900), Expect = 6.4e-93 Identity = 190/292 (65.07%), Postives = 205/292 (70.21%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. NCBI nr
Match: KAG7012363.1 (hypothetical protein SDJN02_25115, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 341.3 bits (874), Expect = 6.6e-90 Identity = 175/246 (71.14%), Postives = 195/246 (79.27%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. TAIR 10
Match: AT1G11840.2 (glyoxalase I homolog ) HSP 1 Score: 292.4 bits (747), Expect = 3.3e-79 Identity = 147/231 (63.64%), Postives = 174/231 (75.32%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. TAIR 10
Match: AT1G11840.3 (glyoxalase I homolog ) HSP 1 Score: 292.4 bits (747), Expect = 3.3e-79 Identity = 147/231 (63.64%), Postives = 174/231 (75.32%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. TAIR 10
Match: AT1G11840.1 (glyoxalase I homolog ) HSP 1 Score: 292.4 bits (747), Expect = 3.3e-79 Identity = 147/231 (63.64%), Postives = 174/231 (75.32%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. TAIR 10
Match: AT1G11840.4 (glyoxalase I homolog ) HSP 1 Score: 292.4 bits (747), Expect = 3.3e-79 Identity = 147/231 (63.64%), Postives = 174/231 (75.32%), Query Frame = 0
BLAST of Lsi02G005970.1 vs. TAIR 10
Match: AT1G11840.6 (glyoxalase I homolog ) HSP 1 Score: 292.4 bits (747), Expect = 3.3e-79 Identity = 147/231 (63.64%), Postives = 174/231 (75.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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