Lcy08g005090.1 (mRNA) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGCTAGGGTTTCGAGCCAACTTATCTTCCATGGCATATTGATCCTTCGAACTCCCGCCGATATCAAAGCTCCCTGCCAATCTCGAAGGATCCAGCCCAACCCACCACGGCGTCTCTCTGTATTCCATGATGCATCTCCCCTAAGCTTCCAGCAACCAGGTTGGATCGAAACACATCTCCTCAAAGTTGTCGAATGGGTTGAAGGGGTAGCAATCACATTCTGAATGGAAGTTCTTGATTGTGCTTTTGGTTGTTGTATCTGATTGAGTTGCAAAGAGTCCAAATTTTCCAAACGATTATTAAACTTGTTTGAATATTCTGGTCGATCAGAGCTCCCTCTCAGTCGTTACGAAAATGTCTGGATTCAGCCACTCTTCCCTGTCATTCAAACATTCTAAGTTAGTAAGAGGAAAACGTTTAGCCCACACCCCCTTGGTCATCTTGCAGTTCCAAAAGAGGTGGGAGCCACATATCTTTATCTTCGGAGGTAGTTTATAACTGGATGAGGAGGTCTCCCATATTAGGCCTAGTTGGCGTATTTAGAATGGTTGTGGCATCTTCTTCCAAAAAGGAAGCTCGTATTTCCACCACTAACATTTTGAGTTGGGCCACTGTAAAGTGTCGAATATTAGGATGTGTGGAAATTGGTTTGGCTGACCCCTCCTTCAGAATCCAAGGATCCTTAGAGGCATCGACCTTAAAACCATTTCCAACTCTCCGTTTGTAGAGAGCTCTCTTCCCTAGATGATGCTCCTCCAAGTGTAAGATGGATTAGACCCAGATTAGACCCCAGCGTGGCTTTGAGAAAGTATCCTGTTTAAAAGTACCGCCCACAAAGCACTTTAGCTAGAAGACTATTTGGGAATTTAATTAAGCGCCAACTTTGCTCAGCTAACATAGCTTGATTAAAAAGAATTAGATCTCTAAACCCCAGCTAACATAGCTTGATTAAAAAGAATTAGATCTCTAAAGCCCAGACCTCCACAGTTTTTATGAAGACAAAGCTTCTTCCAGCTAAGCCAGTGATTCTTCTTTTCGGAATGAGACGAACCCCACCGAAACCTAGCACAAAGAGCATTTAGATCATTACATAGGGTAAGCGGAAAGTTAAAGCAAGTCATAACATAATTAGGTATAGCTTGAGCCATGGATTTAATAAGCACTTCTTTGAGAAAAACTTCACTTTCCATCCTTGTAGAGCTCCCTAAACTCGATACTGATGTTGTTGAGGATCTCCTTCAGGTCCGTTTTGATGGGAAGCACCATTCCCTTAGAATTTCACATATCTTGGCACGGATGCCACTTTTTCTAATACATATCTTAAATCTCAACATTATATTTGAATTTGAGCCGGATTTGCGGTATTATTGTCAATTTTCAAACTTTTTGCTATATTTGGAATATTTGGAATTGCATATTTATTTTATACTATTAAAGTAAATGTCTCCTCACTATATCTCAAACAACACAAAAAATTCTAACCCTCTACCTTTAAATTTATGAATTTAATTGAATAGAAAATTTTGGTAATTAATGCCATTAATTCCTTAAAATTTACATTTTACAATACATTCATATGTTCTTTCCATTGGCTCCTTGGTTTTATTATTCACACATAATACTACAATTCTTTTTTTTTTTTTTTTGACAGATAATACTACAATTCTTTTTCTTATAGAAAGAGTCAATTTTAAAATAACAATAATCTTTTTTTATATATTGAATAACTTCTAAATCTTACCCTCGTGGTTGCTAATTATGAGTATATATAAAGATAAAATGACAAAATATGGTGGATTTTTTTTTTAATTTGGAATAATTTTGGAATTAATTCAATATATATATATATATAGAGAGAGAGAGAGAGAGAAATTGTATCTGATGAGCTTAATTCCCGCAAGTCCACACCAGATTCATTTCCAATCTCCAAACTAACCACCGAAAATGCAGCAATTATGAACACTTATTTTTGGCGATTTATTTTTTTGTGAAATAATAATTAGGGGGAAAAATTAAAAAGGAGGAGGATGAAATTGGTGGTGGAAAACTTGACTGGTTCTCTGTTCTACGTTCAGGTTGAAGACGATGCCACTGTTTCTGATCTTAGAAGCCAGATCACTGCCCACCACAACCTCCCTTCTGACCGTCTGATCTTCGTTCCTGACGACAATCGTGGCCGTCCGATCTCGGAGGCAGATGATGGAATCTCGCTCGTTGATTTTGGCGTCGGAGATGGGTCCCACATTTACATCTTTTTCTGTCCGCTTGATGACGACAGTGGCGATGATCTTGATGCTCGCCAACTCTTCTTTGCCTGTCCTGATCTTCTTCTCTTCCAGTAG ATGAGGGCTAGGGTTTCGAGCCAACTTATCTTCCATGGCATATTGATCCTTCGAACTCCCGCCGATATCAAAGCTCCCTGCCAATCTCGAAGGATCCAGCCCAACCCACCACGGCGTCTCTCTGTATTCCATGATGCATCTCCCCTAAGCTTCCAGCAACCAGGTTGGATCGAAACACATCTCCTCAAAGTTGTCGAATGGGTTGAAGGGGTTGAAGACGATGCCACTGTTTCTGATCTTAGAAGCCAGATCACTGCCCACCACAACCTCCCTTCTGACCGTCTGATCTTCGTTCCTGACGACAATCGTGGCCGTCCGATCTCGGAGGCAGATGATGGAATCTCGCTCGTTGATTTTGGCGTCGGAGATGGGTCCCACATTTACATCTTTTTCTGTCCGCTTGATGACGACAGTGGCGATGATCTTGATGCTCGCCAACTCTTCTTTGCCTGTCCTGATCTTCTTCTCTTCCAGTAG ATGAGGGCTAGGGTTTCGAGCCAACTTATCTTCCATGGCATATTGATCCTTCGAACTCCCGCCGATATCAAAGCTCCCTGCCAATCTCGAAGGATCCAGCCCAACCCACCACGGCGTCTCTCTGTATTCCATGATGCATCTCCCCTAAGCTTCCAGCAACCAGGTTGGATCGAAACACATCTCCTCAAAGTTGTCGAATGGGTTGAAGGGGTTGAAGACGATGCCACTGTTTCTGATCTTAGAAGCCAGATCACTGCCCACCACAACCTCCCTTCTGACCGTCTGATCTTCGTTCCTGACGACAATCGTGGCCGTCCGATCTCGGAGGCAGATGATGGAATCTCGCTCGTTGATTTTGGCGTCGGAGATGGGTCCCACATTTACATCTTTTTCTGTCCGCTTGATGACGACAGTGGCGATGATCTTGATGCTCGCCAACTCTTCTTTGCCTGTCCTGATCTTCTTCTCTTCCAGTAG MRARVSSQLIFHGILILRTPADIKAPCQSRRIQPNPPRRLSVFHDASPLSFQQPGWIETHLLKVVEWVEGVEDDATVSDLRSQITAHHNLPSDRLIFVPDDNRGRPISEADDGISLVDFGVGDGSHIYIFFCPLDDDSGDDLDARQLFFACPDLLLFQ Homology
BLAST of Lcy08g005090.1 vs. ExPASy TrEMBL
Match: A0A6J1JPI4 (uncharacterized protein LOC111486561 OS=Cucurbita maxima OX=3661 GN=LOC111486561 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 7.4e-30 Identity = 67/88 (76.14%), Postives = 77/88 (87.50%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. ExPASy TrEMBL
Match: A0A6J1ERN4 (uncharacterized protein LOC111437093 OS=Cucurbita moschata OX=3662 GN=LOC111437093 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27 Identity = 63/88 (71.59%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. ExPASy TrEMBL
Match: A0A0A0K6V6 (Ubiquitin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044270 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.5e-25 Identity = 65/91 (71.43%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. ExPASy TrEMBL
Match: A0A6J1C3E5 (uncharacterized protein LOC111007894 OS=Momordica charantia OX=3673 GN=LOC111007894 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 6.7e-23 Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. ExPASy TrEMBL
Match: A0A5D3BP45 (Phosphoglucan phosphatase LSF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00410 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15 Identity = 52/99 (52.53%), Postives = 67/99 (67.68%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. NCBI nr
Match: XP_022989504.1 (uncharacterized protein LOC111486561 [Cucurbita maxima]) HSP 1 Score: 140.2 bits (352), Expect = 1.5e-29 Identity = 67/88 (76.14%), Postives = 77/88 (87.50%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. NCBI nr
Match: KAG6589175.1 (hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134.4 bits (337), Expect = 8.4e-28 Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. NCBI nr
Match: XP_022930696.1 (uncharacterized protein LOC111437093 [Cucurbita moschata]) HSP 1 Score: 132.9 bits (333), Expect = 2.5e-27 Identity = 63/88 (71.59%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. NCBI nr
Match: KGN43536.1 (hypothetical protein Csa_020453 [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 3.0e-25 Identity = 65/91 (71.43%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. NCBI nr
Match: XP_022136124.1 (uncharacterized protein LOC111007894 [Momordica charantia]) HSP 1 Score: 117.1 bits (292), Expect = 1.4e-22 Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 0
BLAST of Lcy08g005090.1 vs. TAIR 10
Match: AT2G32360.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 51.6 bits (122), Expect = 6.7e-07 Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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