Lag0040830.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCTACTGGACTCCATCCAGAAGCAGAGTTTGCATATGGTTCAGGCCATGTCAACCCTCTCAAGGCAGTAAATCCAGGGCTGGTGTACAATGCAACTGAAAGCGACTACGTGAAAGTCTTGTGTGGAATACCAGGTTTCACCACCGCCATGCTCCGGCGAATCACCAGCGACAATAGCGCTTGTACTGGCAGCAACATTGGACGTGACTTGGATCTAAACTATCCTTCTTTCGCTCTCTCAACAGATGGTGGACAATTCTTCAATGAATTTTGCACAAGAACTCTCACAAACGTTGAAACTAAAGTGTCCACATATAGAGCTATAATTTATGTCCCACCAGGCCACAGCATCACGTTCACAGTGAATCCTCCCGTTCAGAAATTCAATGGCATTGGAGATACGAAGTCGTTCACGCTGACTGTTCAAGGATTATTGTCGTCAGGCGACTCAGTTTCTGCTTCTTTGGTGTGGAGTAACGGTGTGCACGAAGTCAGAAGCCCTATAGTACTTTTTCAAGCCGATGATATTGTTAAAGCTTAG ATGGATGCTACTGGACTCCATCCAGAAGCAGAGTTTGCATATGGTTCAGGCCATGTCAACCCTCTCAAGGCAGTAAATCCAGGGCTGGTGTACAATGCAACTGAAAGCGACTACGTGAAAGTCTTGTGTGGAATACCAGGTTTCACCACCGCCATGCTCCGGCGAATCACCAGCGACAATAGCGCTTGTACTGGCAGCAACATTGGACGTGACTTGGATCTAAACTATCCTTCTTTCGCTCTCTCAACAGATGGTGGACAATTCTTCAATGAATTTTGCACAAGAACTCTCACAAACGTTGAAACTAAAGTGTCCACATATAGAGCTATAATTTATGTCCCACCAGGCCACAGCATCACGTTCACAGTGAATCCTCCCGTTCAGAAATTCAATGGCATTGGAGATACGAAGTCGTTCACGCTGACTGTTCAAGGATTATTGTCGTCAGGCGACTCAGTTTCTGCTTCTTTGGTGTGGAGTAACGGTGTGCACGAAGTCAGAAGCCCTATAGTACTTTTTCAAGCCGATGATATTGTTAAAGCTTAG ATGGATGCTACTGGACTCCATCCAGAAGCAGAGTTTGCATATGGTTCAGGCCATGTCAACCCTCTCAAGGCAGTAAATCCAGGGCTGGTGTACAATGCAACTGAAAGCGACTACGTGAAAGTCTTGTGTGGAATACCAGGTTTCACCACCGCCATGCTCCGGCGAATCACCAGCGACAATAGCGCTTGTACTGGCAGCAACATTGGACGTGACTTGGATCTAAACTATCCTTCTTTCGCTCTCTCAACAGATGGTGGACAATTCTTCAATGAATTTTGCACAAGAACTCTCACAAACGTTGAAACTAAAGTGTCCACATATAGAGCTATAATTTATGTCCCACCAGGCCACAGCATCACGTTCACAGTGAATCCTCCCGTTCAGAAATTCAATGGCATTGGAGATACGAAGTCGTTCACGCTGACTGTTCAAGGATTATTGTCGTCAGGCGACTCAGTTTCTGCTTCTTTGGTGTGGAGTAACGGTGTGCACGAAGTCAGAAGCCCTATAGTACTTTTTCAAGCCGATGATATTGTTAAAGCTTAG MDATGLHPEAEFAYGSGHVNPLKAVNPGLVYNATESDYVKVLCGIPGFTTAMLRRITSDNSACTGSNIGRDLDLNYPSFALSTDGGQFFNEFCTRTLTNVETKVSTYRAIIYVPPGHSITFTVNPPVQKFNGIGDTKSFTLTVQGLLSSGDSVSASLVWSNGVHEVRSPIVLFQADDIVKA Homology
BLAST of Lag0040830.1 vs. NCBI nr
Match: XP_022976634.1 (cucumisin-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 226.9 bits (577), Expect = 1.4e-55 Identity = 116/167 (69.46%), Postives = 130/167 (77.84%), Query Frame = 0
BLAST of Lag0040830.1 vs. NCBI nr
Match: XP_022976643.1 (cucumisin-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 226.9 bits (577), Expect = 1.4e-55 Identity = 116/167 (69.46%), Postives = 130/167 (77.84%), Query Frame = 0
BLAST of Lag0040830.1 vs. NCBI nr
Match: XP_022956553.1 (cucumisin-like [Cucurbita moschata]) HSP 1 Score: 226.5 bits (576), Expect = 1.9e-55 Identity = 116/166 (69.88%), Postives = 130/166 (78.31%), Query Frame = 0
BLAST of Lag0040830.1 vs. NCBI nr
Match: XP_023548098.1 (cucumisin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 225.3 bits (573), Expect = 4.2e-55 Identity = 117/175 (66.86%), Postives = 135/175 (77.14%), Query Frame = 0
BLAST of Lag0040830.1 vs. NCBI nr
Match: KAG6600971.1 (hypothetical protein SDJN03_06204, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 224.6 bits (571), Expect = 7.1e-55 Identity = 115/166 (69.28%), Postives = 129/166 (77.71%), Query Frame = 0
BLAST of Lag0040830.1 vs. ExPASy Swiss-Prot
Match: Q39547 (Cucumisin OS=Cucumis melo OX=3656 PE=1 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 6.5e-51 Identity = 106/166 (63.86%), Postives = 123/166 (74.10%), Query Frame = 0
BLAST of Lag0040830.1 vs. ExPASy Swiss-Prot
Match: Q9FGU3 (Subtilisin-like protease SBT4.4 OS=Arabidopsis thaliana OX=3702 GN=SBT4.4 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30 Identity = 71/166 (42.77%), Postives = 105/166 (63.25%), Query Frame = 0
BLAST of Lag0040830.1 vs. ExPASy Swiss-Prot
Match: Q9FIG2 (Subtilisin-like protease SBT4.13 OS=Arabidopsis thaliana OX=3702 GN=SBT4.13 PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.0e-28 Identity = 73/179 (40.78%), Postives = 105/179 (58.66%), Query Frame = 0
BLAST of Lag0040830.1 vs. ExPASy Swiss-Prot
Match: Q9FIM6 (Subtilisin-like protease SBT4.8 OS=Arabidopsis thaliana OX=3702 GN=SBT4.8 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.9e-28 Identity = 71/176 (40.34%), Postives = 108/176 (61.36%), Query Frame = 0
BLAST of Lag0040830.1 vs. ExPASy Swiss-Prot
Match: Q9STF7 (Subtilisin-like protease SBT4.6 OS=Arabidopsis thaliana OX=3702 GN=SBT4.6 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.7e-27 Identity = 71/166 (42.77%), Postives = 100/166 (60.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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