Lag0031578.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAACTCCTCTTCCCTCTTAGCTTTTTCACTCCTTTTATTGATTGTGGTTTCACATGCAGCATCCACAAACGACGTCGTTTCCACCATCTGTCCCAAGACCAAAAATCCACCCTTCTGCGAAAGCGTGTTAAAATCTGCAGGTACCACAGATCTGAAAGGACTAGCCACCTACACCCTCAACCTTGCTCATACAAATGCAGGCAAATCTGTGACCCTGGCCAAGTCATTGGCAGCGGCAGCGACCGATCCACAACTTAAGGAACGATATTCATCTTGTTCTGAGAACTACGATGAGGTCATTGGTGACATTGAAAATGCCCAAAAGGACTTGGCCTCTGGCGACTTTAACGGCGTCAATGTTGCGACTTCCGGCGCCATGACGTCGGTCGACGACTGTGAAGACGACTTCAAGCAGCCACCGGCAGACACTTCCTCGCTTTTGAAGGATGGCAAAACTCTAAATGATATATGCAGTATTATTTTGGTTATATCTAATCTTCTCCCTAGACCCATGTAA ATGGCCAACTCCTCTTCCCTCTTAGCTTTTTCACTCCTTTTATTGATTGTGGTTTCACATGCAGCATCCACAAACGACGTCGTTTCCACCATCTGTCCCAAGACCAAAAATCCACCCTTCTGCGAAAGCGTGTTAAAATCTGCAGGTACCACAGATCTGAAAGGACTAGCCACCTACACCCTCAACCTTGCTCATACAAATGCAGGCAAATCTGTGACCCTGGCCAAGTCATTGGCAGCGGCAGCGACCGATCCACAACTTAAGGAACGATATTCATCTTGTTCTGAGAACTACGATGAGGTCATTGGTGACATTGAAAATGCCCAAAAGGACTTGGCCTCTGGCGACTTTAACGGCGTCAATGTTGCGACTTCCGGCGCCATGACGTCGGTCGACGACTGTGAAGACGACTTCAAGCAGCCACCGGCAGACACTTCCTCGCTTTTGAAGGATGGCAAAACTCTAAATGATATATGCAGTATTATTTTGGTTATATCTAATCTTCTCCCTAGACCCATGTAA ATGGCCAACTCCTCTTCCCTCTTAGCTTTTTCACTCCTTTTATTGATTGTGGTTTCACATGCAGCATCCACAAACGACGTCGTTTCCACCATCTGTCCCAAGACCAAAAATCCACCCTTCTGCGAAAGCGTGTTAAAATCTGCAGGTACCACAGATCTGAAAGGACTAGCCACCTACACCCTCAACCTTGCTCATACAAATGCAGGCAAATCTGTGACCCTGGCCAAGTCATTGGCAGCGGCAGCGACCGATCCACAACTTAAGGAACGATATTCATCTTGTTCTGAGAACTACGATGAGGTCATTGGTGACATTGAAAATGCCCAAAAGGACTTGGCCTCTGGCGACTTTAACGGCGTCAATGTTGCGACTTCCGGCGCCATGACGTCGGTCGACGACTGTGAAGACGACTTCAAGCAGCCACCGGCAGACACTTCCTCGCTTTTGAAGGATGGCAAAACTCTAAATGATATATGCAGTATTATTTTGGTTATATCTAATCTTCTCCCTAGACCCATGTAA MANSSSLLAFSLLLLIVVSHAASTNDVVSTICPKTKNPPFCESVLKSAGTTDLKGLATYTLNLAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLASGDFNGVNVATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNLLPRPM Homology
BLAST of Lag0031578.1 vs. NCBI nr
Match: TYK11705.1 (pectinesterase inhibitor-like [Cucumis melo var. makuwa]) HSP 1 Score: 246.1 bits (627), Expect = 2.2e-61 Identity = 128/172 (74.42%), Postives = 144/172 (83.72%), Query Frame = 0
BLAST of Lag0031578.1 vs. NCBI nr
Match: KAA0052848.1 (pectinesterase inhibitor-like [Cucumis melo var. makuwa]) HSP 1 Score: 245.7 bits (626), Expect = 2.8e-61 Identity = 131/173 (75.72%), Postives = 146/173 (84.39%), Query Frame = 0
BLAST of Lag0031578.1 vs. NCBI nr
Match: KAE8647075.1 (hypothetical protein Csa_022944 [Cucumis sativus]) HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61 Identity = 126/171 (73.68%), Postives = 145/171 (84.80%), Query Frame = 0
BLAST of Lag0031578.1 vs. NCBI nr
Match: XP_004148234.2 (pectinesterase inhibitor [Cucumis sativus]) HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61 Identity = 126/171 (73.68%), Postives = 145/171 (84.80%), Query Frame = 0
BLAST of Lag0031578.1 vs. NCBI nr
Match: XP_038907188.1 (pectinesterase inhibitor-like [Benincasa hispida]) HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61 Identity = 129/169 (76.33%), Postives = 146/169 (86.39%), Query Frame = 0
BLAST of Lag0031578.1 vs. ExPASy Swiss-Prot
Match: P83326 (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26 Identity = 70/176 (39.77%), Postives = 104/176 (59.09%), Query Frame = 0
BLAST of Lag0031578.1 vs. ExPASy Swiss-Prot
Match: Q9LNF2 (Pectinesterase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PMEI1 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 6.0e-22 Identity = 63/169 (37.28%), Postives = 100/169 (59.17%), Query Frame = 0
BLAST of Lag0031578.1 vs. ExPASy Swiss-Prot
Match: Q9LUV1 (Pectinesterase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PMEI2 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.9e-18 Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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