Lag0031578 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0031578
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPectinesterase inhibitor-like
Locationchr11: 10232508 .. 10233029 (-)
RNA-Seq ExpressionLag0031578
SyntenyLag0031578
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAACTCCTCTTCCCTCTTAGCTTTTTCACTCCTTTTATTGATTGTGGTTTCACATGCAGCATCCACAAACGACGTCGTTTCCACCATCTGTCCCAAGACCAAAAATCCACCCTTCTGCGAAAGCGTGTTAAAATCTGCAGGTACCACAGATCTGAAAGGACTAGCCACCTACACCCTCAACCTTGCTCATACAAATGCAGGCAAATCTGTGACCCTGGCCAAGTCATTGGCAGCGGCAGCGACCGATCCACAACTTAAGGAACGATATTCATCTTGTTCTGAGAACTACGATGAGGTCATTGGTGACATTGAAAATGCCCAAAAGGACTTGGCCTCTGGCGACTTTAACGGCGTCAATGTTGCGACTTCCGGCGCCATGACGTCGGTCGACGACTGTGAAGACGACTTCAAGCAGCCACCGGCAGACACTTCCTCGCTTTTGAAGGATGGCAAAACTCTAAATGATATATGCAGTATTATTTTGGTTATATCTAATCTTCTCCCTAGACCCATGTAA

mRNA sequence

ATGGCCAACTCCTCTTCCCTCTTAGCTTTTTCACTCCTTTTATTGATTGTGGTTTCACATGCAGCATCCACAAACGACGTCGTTTCCACCATCTGTCCCAAGACCAAAAATCCACCCTTCTGCGAAAGCGTGTTAAAATCTGCAGGTACCACAGATCTGAAAGGACTAGCCACCTACACCCTCAACCTTGCTCATACAAATGCAGGCAAATCTGTGACCCTGGCCAAGTCATTGGCAGCGGCAGCGACCGATCCACAACTTAAGGAACGATATTCATCTTGTTCTGAGAACTACGATGAGGTCATTGGTGACATTGAAAATGCCCAAAAGGACTTGGCCTCTGGCGACTTTAACGGCGTCAATGTTGCGACTTCCGGCGCCATGACGTCGGTCGACGACTGTGAAGACGACTTCAAGCAGCCACCGGCAGACACTTCCTCGCTTTTGAAGGATGGCAAAACTCTAAATGATATATGCAGTATTATTTTGGTTATATCTAATCTTCTCCCTAGACCCATGTAA

Coding sequence (CDS)

ATGGCCAACTCCTCTTCCCTCTTAGCTTTTTCACTCCTTTTATTGATTGTGGTTTCACATGCAGCATCCACAAACGACGTCGTTTCCACCATCTGTCCCAAGACCAAAAATCCACCCTTCTGCGAAAGCGTGTTAAAATCTGCAGGTACCACAGATCTGAAAGGACTAGCCACCTACACCCTCAACCTTGCTCATACAAATGCAGGCAAATCTGTGACCCTGGCCAAGTCATTGGCAGCGGCAGCGACCGATCCACAACTTAAGGAACGATATTCATCTTGTTCTGAGAACTACGATGAGGTCATTGGTGACATTGAAAATGCCCAAAAGGACTTGGCCTCTGGCGACTTTAACGGCGTCAATGTTGCGACTTCCGGCGCCATGACGTCGGTCGACGACTGTGAAGACGACTTCAAGCAGCCACCGGCAGACACTTCCTCGCTTTTGAAGGATGGCAAAACTCTAAATGATATATGCAGTATTATTTTGGTTATATCTAATCTTCTCCCTAGACCCATGTAA

Protein sequence

MANSSSLLAFSLLLLIVVSHAASTNDVVSTICPKTKNPPFCESVLKSAGTTDLKGLATYTLNLAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLASGDFNGVNVATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNLLPRPM
Homology
BLAST of Lag0031578 vs. NCBI nr
Match: TYK11705.1 (pectinesterase inhibitor-like [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 2.2e-61
Identity = 128/172 (74.42%), Postives = 144/172 (83.72%), Query Frame = 0

Query: 1   MANSSSLLAFSL---LLLIVVSHAASTNDVVSTICPKTKNPPFCESVLKSAGTTDLKGLA 60
           MAN+S L+  SL   LL  ++S+ AS+NDVVSTICPKT NPPFC SVLKS GTTDLKGLA
Sbjct: 1   MANTSCLIIVSLVGVLLFTIISNVASSNDVVSTICPKTSNPPFCSSVLKSVGTTDLKGLA 60

Query: 61  TYTLNLAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLASGDF 120
            YTLNLAHTNA KS+TLAK LA   T+PQLK+RYSSC+E+YDE +GDIENAQKDL  GDF
Sbjct: 61  VYTLNLAHTNARKSLTLAKLLATTTTNPQLKQRYSSCAESYDEAVGDIENAQKDLTLGDF 120

Query: 121 NGVNVATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNLL 170
           N VN+ TSGAMT +DDC+D F QPP DTS LLK+GKTLNDICSIILVISNLL
Sbjct: 121 NAVNIVTSGAMTEIDDCQDKFAQPPKDTSLLLKNGKTLNDICSIILVISNLL 172

BLAST of Lag0031578 vs. NCBI nr
Match: KAA0052848.1 (pectinesterase inhibitor-like [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.8e-61
Identity = 131/173 (75.72%), Postives = 146/173 (84.39%), Query Frame = 0

Query: 1   MANSSSLLAFS---LLLLIVVSHAASTND-VVSTICPKTKNPPFCESVLKSAGTTDLKGL 60
           MAN+S L+  S   LLL  ++S+ AS+ND VVSTICPKT NPPFC SVLKSAGTTDLKGL
Sbjct: 1   MANNSCLMIVSLIGLLLFTIISNVASSNDVVVSTICPKTSNPPFCSSVLKSAGTTDLKGL 60

Query: 61  ATYTLNLAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLASGD 120
           A YTLNLAHTNA KS+TLAKSLA   T+PQLK+RYSSC+E+YDE IGDIENAQKDL  GD
Sbjct: 61  AVYTLNLAHTNARKSLTLAKSLATTTTNPQLKQRYSSCAESYDEAIGDIENAQKDLTLGD 120

Query: 121 FNGVNVATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNLL 170
           FN VN+ TSGAMT +DDC+D F QPP DTS LLK+GKTLNDICSIILVISNLL
Sbjct: 121 FNAVNIVTSGAMTEIDDCQDKFAQPPKDTSLLLKNGKTLNDICSIILVISNLL 173

BLAST of Lag0031578 vs. NCBI nr
Match: KAE8647075.1 (hypothetical protein Csa_022944 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61
Identity = 126/171 (73.68%), Postives = 145/171 (84.80%), Query Frame = 0

Query: 1   MANSSSLLAFSL---LLLIVVSHAASTNDVVSTICPKTKNPPFCESVLKSAGTTDLKGLA 60
           MAN+S  +  SL   LL I++S+ AS+NDV+STICPKT NPPFC SVLKSAGTTDLKGL 
Sbjct: 296 MANNSCFITVSLIGVLLFIIISYVASSNDVISTICPKTSNPPFCSSVLKSAGTTDLKGLV 355

Query: 61  TYTLNLAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLASGDF 120
            YTLNLAHTNAGKS+TLA SLA  AT+PQLK+RYSSC E+YDE +GDIENAQKDLA  DF
Sbjct: 356 VYTLNLAHTNAGKSLTLANSLAKTATNPQLKQRYSSCVESYDEAVGDIENAQKDLAVEDF 415

Query: 121 NGVNVATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNL 169
           NGVN+ TSGAMT++ DC+D F QPP DTS LL++GKT+NDICSIILVISNL
Sbjct: 416 NGVNIVTSGAMTNIGDCQDKFAQPPKDTSLLLENGKTINDICSIILVISNL 466

BLAST of Lag0031578 vs. NCBI nr
Match: XP_004148234.2 (pectinesterase inhibitor [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61
Identity = 126/171 (73.68%), Postives = 145/171 (84.80%), Query Frame = 0

Query: 1   MANSSSLLAFSL---LLLIVVSHAASTNDVVSTICPKTKNPPFCESVLKSAGTTDLKGLA 60
           MAN+S  +  SL   LL I++S+ AS+NDV+STICPKT NPPFC SVLKSAGTTDLKGL 
Sbjct: 1   MANNSCFITVSLIGVLLFIIISYVASSNDVISTICPKTSNPPFCSSVLKSAGTTDLKGLV 60

Query: 61  TYTLNLAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLASGDF 120
            YTLNLAHTNAGKS+TLA SLA  AT+PQLK+RYSSC E+YDE +GDIENAQKDLA  DF
Sbjct: 61  VYTLNLAHTNAGKSLTLANSLAKTATNPQLKQRYSSCVESYDEAVGDIENAQKDLAVEDF 120

Query: 121 NGVNVATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNL 169
           NGVN+ TSGAMT++ DC+D F QPP DTS LL++GKT+NDICSIILVISNL
Sbjct: 121 NGVNIVTSGAMTNIGDCQDKFAQPPKDTSLLLENGKTINDICSIILVISNL 171

BLAST of Lag0031578 vs. NCBI nr
Match: XP_038907188.1 (pectinesterase inhibitor-like [Benincasa hispida])

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61
Identity = 129/169 (76.33%), Postives = 146/169 (86.39%), Query Frame = 0

Query: 1   MANSSSLLAFSLLLLIVVSHAASTNDVVSTICPKTKNPPFCESVLKSAGTTDLKGLATYT 60
           MANS+ +L+  L L  VVSHAAS NDVVSTICPKT NPPFC SVLKSAGTTD+K LA YT
Sbjct: 1   MANSNLILSSLLALFTVVSHAAS-NDVVSTICPKTMNPPFCASVLKSAGTTDMKRLAVYT 60

Query: 61  LNLAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLASGDFNGV 120
           L LAHTNA K V LAKSLAA AT+ QLK+RYSSCSE++DE +GDIE AQ+DLA+GDFN V
Sbjct: 61  LKLAHTNAAKCVALAKSLAATATNTQLKQRYSSCSESFDEAVGDIETAQEDLAAGDFNAV 120

Query: 121 NVATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNLL 170
           N+ATSGAMT +DDC+D+FKQPP DTS LLK+G+TLNDICSIILVISNLL
Sbjct: 121 NIATSGAMTEIDDCQDNFKQPPTDTSMLLKNGRTLNDICSIILVISNLL 168

BLAST of Lag0031578 vs. ExPASy Swiss-Prot
Match: P83326 (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26
Identity = 70/176 (39.77%), Postives = 104/176 (59.09%), Query Frame = 0

Query: 4   SSSLLAFSLLLLIVVS------HAASTNDVVSTICPKTKNPPFCESVLKS---AGTTDLK 63
           SSSL    LL+++ +S         + N ++S ICPKT+NP  C   L+S   + + DLK
Sbjct: 7   SSSLFVSLLLVILFISPLSQRPSVKAENHLISEICPKTRNPSLCLQALESDPRSASKDLK 66

Query: 64  GLATYTLNLAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLAS 123
           GL  +++++A  +A ++  +  SL   ATDP+LK RY +CSENY + I  +  A++ L S
Sbjct: 67  GLGQFSIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQFLTS 126

Query: 124 GDFNGVNVATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNLLP 171
           GD+N +N+  S A      CED F+ PP   + L +    L D+C I+LVISNLLP
Sbjct: 127 GDYNSLNIYASAAFDGAGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLP 182

BLAST of Lag0031578 vs. ExPASy Swiss-Prot
Match: Q9LNF2 (Pectinesterase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PMEI1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.0e-22
Identity = 63/169 (37.28%), Postives = 100/169 (59.17%), Query Frame = 0

Query: 4   SSSLLAFSLLLLIVVSHAASTNDVVSTICPKTKNPPFCESVLKSA-GTTDLKGLATYTLN 63
           +++ L+  + LL++ S  A T+  +STIC KT NP FC   L +   + +L+ LA  TL+
Sbjct: 7   NNAFLSSLMFLLLIGSSYAITSSEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLD 66

Query: 64  LAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLASGDFNGVNV 123
                A +++   +S+     DP+ K  Y SC + Y+  IG++E A + LASGD  G+N+
Sbjct: 67  STQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNM 126

Query: 124 ATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNLLPR 172
             S A+   D C DD K+  +  SS++ + KT+ ++C I LVISN+LPR
Sbjct: 127 KVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLPR 175

BLAST of Lag0031578 vs. ExPASy Swiss-Prot
Match: Q9LUV1 (Pectinesterase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PMEI2 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.9e-18
Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = 0

Query: 4   SSSLLAFSLLLLIVVSHAASTNDVVSTICPKTKNPPFCESVLKSAGTT---DLKGLATYT 63
           ++ +L  SL+  ++     +    +  IC K KN  FC S +KS   T   DL+ LA  T
Sbjct: 6   TNRVLMSSLMFFVMTGSLNAQVADIKAICGKAKNQSFCTSYMKSNPKTSGADLQTLANIT 65

Query: 64  LNLAHTNAGKSVTLAKSLAAAATDPQLKERYSSCSENYDEVIGDIENAQKDLASGDFNGV 123
              A T+A +     +SL   AT+P +K+ Y+SC ++Y   I  + +A++ LASGD  G+
Sbjct: 66  FGSAQTSASEGFRKIQSLVKTATNPTMKKAYTSCVQHYKSAISSLNDAKQSLASGDGKGL 125

Query: 124 NVATSGAMTSVDDCEDDFKQPPADTSSLLKDGKTLNDICSIILVISNLL 170
           N+  S AM     CE D      D S++   G   N IC I+LVISN++
Sbjct: 126 NIKVSAAMEGPSTCEQDMADFKVDPSAVKNSGDFQN-ICGIVLVISNMM 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK11705.12.2e-6174.42pectinesterase inhibitor-like [Cucumis melo var. makuwa][more]
KAA0052848.12.8e-6175.72pectinesterase inhibitor-like [Cucumis melo var. makuwa][more]
KAE8647075.13.7e-6173.68hypothetical protein Csa_022944 [Cucumis sativus][more]
XP_004148234.23.7e-6173.68pectinesterase inhibitor [Cucumis sativus][more]
XP_038907188.13.7e-6176.33pectinesterase inhibitor-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
P833261.8e-2639.77Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2[more]
Q9LNF26.0e-2237.28Pectinesterase inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=PMEI1 PE=1 SV=1[more]
Q9LUV16.9e-1834.91Pectinesterase inhibitor 2 OS=Arabidopsis thaliana OX=3702 GN=PMEI2 PE=1 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainSMARTSM00856PMEI_2coord: 23..165
e-value: 5.1E-30
score: 115.7
IPR006501Pectinesterase inhibitor domainTIGRFAMTIGR01614TIGR01614coord: 1..168
e-value: 2.6E-34
score: 116.1
IPR006501Pectinesterase inhibitor domainPFAMPF04043PMEIcoord: 27..165
e-value: 2.9E-20
score: 73.1
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3D1.20.140.40Invertase/pectin methylesterase inhibitor family proteincoord: 22..171
e-value: 6.8E-37
score: 128.8
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILY101148Plant invertase/pectin methylesterase inhibitorcoord: 25..170
NoneNo IPR availablePANTHERPTHR36710PECTINESTERASE INHIBITOR-LIKEcoord: 5..169
NoneNo IPR availablePANTHERPTHR36710:SF6PECTINESTERASE INHIBITOR-LIKEcoord: 5..169
IPR034086Pectinesterase inhibitor, plantCDDcd15797PMEIcoord: 24..169
e-value: 3.87417E-50
score: 156.428

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0031578.1Lag0031578.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043086 negative regulation of catalytic activity
molecular_function GO:0046910 pectinesterase inhibitor activity
molecular_function GO:0004857 enzyme inhibitor activity