Lag0029325.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTGTTGTTGGCGAAGTTCAACCGTAGCTTCTCGAATAGATGGTTTGAGCTTCATCACGCTCTTTATTCTGAGGAGATCTAGCTGATTGCTATGATCTGTTGGACAATTTGGACAGATAGAAACAATGTTGTACATGAGAAAGTTGTTCCTCCTCTAGATATTCACAACAGATGGATTAAAAATTATCTAAGGGAGTACTTATAGACAAATTCTAATAATAATCGATCCCCTGTTGATAATTCAGTAGTTCAAGAGCAAATGTCAGCCTGAAATCCGCCTCCGACGAACTGGGTAAAGATTAATGTTGACGTTGCTTGGAAGGCAGGTTTGCCTCGCACAGGAATTGGCGTTATATGTCGCGATTCTTCCGGATTATTGCTAGGAGCTTCATCTGCTTTTGTCAGCCTGGATTTTGACCCTCCTTTAGCCGAATTGCGGACTCTTTCAAAAGGCATGAAGTTGGCGATCTCCCTAGGTTACGGAAATGTGATTTTGGATTCTGATTGTCTCCATGCGATTAATCTCATTAAGGGAGAATTGGAGGTGCGGAATGAACTGGGAATTATTATCGATGATCTTCGAGCAAAGACTTCCCTATTCAATGAGCTTATTTTTTCTTTTTCACCTAAAAGAGTCAACTATGCAGCTGACTCCATAGCTAAGAGAGCTTTAAGAGAGGAATGTAATGAAATTTGGATCCACGAGTTTCCTGAGTGGATTGTTAATCTGGTCATTCATGACCGTTTGTCTGTTGCCCTTGAGGCATAA ATGAATTGTTGTTGGCGAAGTTCAACCGTAGCTTCTCGAATAGATGGTTTGCCTCGCACAGGAATTGGCGTTATATGTCGCGATTCTTCCGGATTATTGCTAGGAGCTTCATCTGCTTTTGTCAGCCTGGATTTTGACCCTCCTTTAGCCGAATTGCGGACTCTTTCAAAAGGCATGAAGTTGGCGATCTCCCTAGGTTACGGAAATGTGATTTTGGATTCTGATTGTCTCCATGCGATTAATCTCATTAAGGGAGAATTGGAGGTGCGGAATGAACTGGGAATTATTATCGATGATCTTCGAGCAAAGACTTCCCTATTCAATGAGCTTATTTTTTCTTTTTCACCTAAAAGAGTCAACTATGCAGCTGACTCCATAGCTAAGAGAGCTTTAAGAGAGGAATGTAATGAAATTTGGATCCACGAGTTTCCTGAGTGGATTGTTAATCTGGTCATTCATGACCGTTTGTCTGTTGCCCTTGAGGCATAA ATGAATTGTTGTTGGCGAAGTTCAACCGTAGCTTCTCGAATAGATGGTTTGCCTCGCACAGGAATTGGCGTTATATGTCGCGATTCTTCCGGATTATTGCTAGGAGCTTCATCTGCTTTTGTCAGCCTGGATTTTGACCCTCCTTTAGCCGAATTGCGGACTCTTTCAAAAGGCATGAAGTTGGCGATCTCCCTAGGTTACGGAAATGTGATTTTGGATTCTGATTGTCTCCATGCGATTAATCTCATTAAGGGAGAATTGGAGGTGCGGAATGAACTGGGAATTATTATCGATGATCTTCGAGCAAAGACTTCCCTATTCAATGAGCTTATTTTTTCTTTTTCACCTAAAAGAGTCAACTATGCAGCTGACTCCATAGCTAAGAGAGCTTTAAGAGAGGAATGTAATGAAATTTGGATCCACGAGTTTCCTGAGTGGATTGTTAATCTGGTCATTCATGACCGTTTGTCTGTTGCCCTTGAGGCATAA MNCCWRSSTVASRIDGLPRTGIGVICRDSSGLLLGASSAFVSLDFDPPLAELRTLSKGMKLAISLGYGNVILDSDCLHAINLIKGELEVRNELGIIIDDLRAKTSLFNELIFSFSPKRVNYAADSIAKRALREECNEIWIHEFPEWIVNLVIHDRLSVALEA Homology
BLAST of Lag0029325.1 vs. NCBI nr
Match: XP_023893303.1 (uncharacterized protein LOC112005292 [Quercus suber]) HSP 1 Score: 85.5 bits (210), Expect = 4.6e-13 Identity = 42/136 (30.88%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of Lag0029325.1 vs. NCBI nr
Match: XP_038704726.1 (uncharacterized protein LOC120000672 [Tripterygium wilfordii]) HSP 1 Score: 84.7 bits (208), Expect = 7.9e-13 Identity = 43/138 (31.16%), Postives = 75/138 (54.35%), Query Frame = 0
BLAST of Lag0029325.1 vs. NCBI nr
Match: KMS97072.1 (hypothetical protein BVRB_7g179330 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 84.0 bits (206), Expect = 1.3e-12 Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 0
BLAST of Lag0029325.1 vs. NCBI nr
Match: XP_023919081.1 (uncharacterized protein LOC112030645 [Quercus suber]) HSP 1 Score: 82.8 bits (203), Expect = 3.0e-12 Identity = 39/134 (29.10%), Postives = 75/134 (55.97%), Query Frame = 0
BLAST of Lag0029325.1 vs. NCBI nr
Match: XP_021859888.1 (uncharacterized protein LOC110798996 [Spinacia oleracea]) HSP 1 Score: 82.4 bits (202), Expect = 3.9e-12 Identity = 41/135 (30.37%), Postives = 75/135 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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