Lag0011574.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAGAGGTTCCCCGTTGGAAGCAGAAAGCCGGTCGTGTCAAGGTAGTTCAGACTGATACCCCTTTGCCGTCGACATCTGATTTTGAGAAAGAGATTACAGAAAGAGAAGAACAGGAGAAAAAGGAAGCATAGGACAAAGCGAGAGAAGAAACAAAAAGGAAAGCAGAGGAGGAAATATTGCCCGAACAGAGGGAAGACAAAGGCAAAGGCATTGCTGAAGCATCGGCTGAAGCTGATGATGTTGATACTGGGGAAATACGGTTGCTGTACAACCACTTCATCAACAATCTTGCCCGAGCAAAGTATATAGAGATGCTGAAAAGAGACTTTCTGTTTGAATGAGGATATGGGGATGATCTGCCACGGTTCTTGAGGATTGGAATAGTGAACCATGGTTGGGGTTAGTTCTACGCAAAGCCAGAGCTGGTCAATTCTAATGTTGTCCGTGAGTTTTATGCAAATATTGATGATCAAGAAGGATTTCAGGCTATCGTTCAAGGAGTGCCAGTGGATTGGAGCCCAGGGGCCATCAATTCTCTTTTCAACCTTCAAGACTTTTTGCACGCAGGCTTCAATGAGATGGTGGTAGCACCATCGAATGATTAGTTAAATGCGGCTGTCAGGGAGATTGGCATCGAGGGGGCTCAGTGGAGAATTTCGAAGACAGAAAAGCGCACATTTCAAGCTGCTTATTTGAAAAGCGAAGCCAATACATGGATGGGCTTCATCAAGTTGCACTTGTTGTCGACAACTCGCGATTCAACGGTGTCTCGAGATCGGGTATTGCTTGTGTTTTCTATTCTTCGTTCGATGAGTATTGATGTGGGCAAAATCATTTCTACTGAGATTTATGAATGTTGGCGGAAGAAGGTATGA ATGCGAGAGGTTCCCCGTTGGAAGCAGAAAGCCGGTCGTGTCAAGAGGGAAGACAAAGGCAAAGGCATTGCTGAAGCATCGGCTGAAGCTGATGATGTTGATACTGGGGAAATACGGTTGCTGTACAACCACTTCATCAACAATCTTGCCCGAGCAAAGGAGATTGGCATCGAGGGGGCTCAGTGGAGAATTTCGAAGACAGAAAAGCGCACATTTCAAGCTGCTTATTTGAAAAGCGAAGCCAATACATGGATGGGCTTCATCAAGTTGCACTTGTTGTCGACAACTCGCGATTCAACGGTGTCTCGAGATCGGGTATTGCTTGTGTTTTCTATTCTTCGTTCGATGAGTATTGATGTGGGCAAAATCATTTCTACTGAGATTTATGAATGTTGGCGGAAGAAGGTATGA ATGCGAGAGGTTCCCCGTTGGAAGCAGAAAGCCGGTCGTGTCAAGAGGGAAGACAAAGGCAAAGGCATTGCTGAAGCATCGGCTGAAGCTGATGATGTTGATACTGGGGAAATACGGTTGCTGTACAACCACTTCATCAACAATCTTGCCCGAGCAAAGGAGATTGGCATCGAGGGGGCTCAGTGGAGAATTTCGAAGACAGAAAAGCGCACATTTCAAGCTGCTTATTTGAAAAGCGAAGCCAATACATGGATGGGCTTCATCAAGTTGCACTTGTTGTCGACAACTCGCGATTCAACGGTGTCTCGAGATCGGGTATTGCTTGTGTTTTCTATTCTTCGTTCGATGAGTATTGATGTGGGCAAAATCATTTCTACTGAGATTTATGAATGTTGGCGGAAGAAGGTATGA MREVPRWKQKAGRVKREDKGKGIAEASAEADDVDTGEIRLLYNHFINNLARAKEIGIEGAQWRISKTEKRTFQAAYLKSEANTWMGFIKLHLLSTTRDSTVSRDRVLLVFSILRSMSIDVGKIISTEIYECWRKKV Homology
BLAST of Lag0011574.1 vs. NCBI nr
Match: EOY13933.1 (Uncharacterized protein TCM_032752 [Theobroma cacao]) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-07 Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 0
BLAST of Lag0011574.1 vs. NCBI nr
Match: EOY08849.1 (Uncharacterized protein TCM_024087 [Theobroma cacao]) HSP 1 Score: 67.0 bits (162), Expect = 1.4e-07 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 0
BLAST of Lag0011574.1 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]) HSP 1 Score: 66.6 bits (161), Expect = 1.9e-07 Identity = 36/100 (36.00%), Postives = 55/100 (55.00%), Query Frame = 0
BLAST of Lag0011574.1 vs. NCBI nr
Match: TYH88163.1 (hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]) HSP 1 Score: 63.2 bits (152), Expect = 2.1e-06 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of Lag0011574.1 vs. NCBI nr
Match: KAB2005540.1 (hypothetical protein ES319_D11G277400v1 [Gossypium barbadense]) HSP 1 Score: 62.8 bits (151), Expect = 2.7e-06 Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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