Lag0005495.1 (mRNA) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAAAGCTTGCGTCAACCTTCGAAGTCCCTCCTCTTTCTCGGTCACCATATCTGACTCGGCCAATCAAGGTTTACTCAGGATTTAAGATTTATCAAACTGTTTCTTCTTCCACTGTATTCTTCATTCTTGCTATAACCTTTATGATTGTAGCATTGTGCTATTATTTTTTATCCTCCCTATTTTTCAGACATAAGTACTATAAATAACAGTTTGTTGTTTTTATCTTCCATAATAATTTCATCAAGCTATTGTAGATGTTTTATTTATCGTGGAAACGCTACCCCTTTGTTGGTTGTACTACATATTGACAGGGTTTCGAGGTGGGGGGGAACAAGATTCCTCTATCTCACCTTCAGTTTGCTGATGACACGATTTTCTTTTGCTCTGGTAAGGAGGAGTCTTTTTCAGTCCTGAACCATATGCTTGCCTTTTTTGAGTCCATGTCGGGCCTTAAAATCAACAGGGATAAGTGTCAGCTTCTGGGTATCAATAGCGATGAGAGCAAAGTCAATAGATGGGCTTCGTTGGTTGGTTGCGAGGTAGGATCTTTCCCCTCTTCCTATTTAGGGCTCCCGTTGGGTCACAATCCGAGGAGTTCTTCTTTTTGGGAGCCAGTGGTGGGCAAGGTTAGGAAGAGACTTGCAAGTTGGAAAGAAGCTTCTTTTCCAAGGGTGGAAGGCTTACCCTTATCAAATCCGTCCTGA ATGAAGAAAAAGCTTGCGTCAACCTTCGAAGTCCCTCCTCTTTCTCGGTCACCATATCTGACTCGGCCAATCAAGGGTTTCGAGGTGGGGGGGAACAAGATTCCTCTATCTCACCTTCAGTTTGCTGATGACACGATTTTCTTTTGCTCTGGTAAGGAGGAGTCTTTTTCAGTCCTGAACCATATGCTTGCCTTTTTTGAGTCCATGTCGGGCCTTAAAATCAACAGGGATAAGTGTCAGCTTCTGGGTATCAATAGCGATGAGAGCAAAGTCAATAGATGGGCTTCGTTGGTTGGTTGCGAGGTAGGATCTTTCCCCTCTTCCTATTTAGGGCTCCCGTTGGGTCACAATCCGAGGAGTTCTTCTTTTTGGGAGCCAGTGGTGGGCAAGGTTAGGAAGAGACTTGCAAGTTGGAAAGAAGCTTCTTTTCCAAGGGTGGAAGGCTTACCCTTATCAAATCCGTCCTGA ATGAAGAAAAAGCTTGCGTCAACCTTCGAAGTCCCTCCTCTTTCTCGGTCACCATATCTGACTCGGCCAATCAAGGGTTTCGAGGTGGGGGGGAACAAGATTCCTCTATCTCACCTTCAGTTTGCTGATGACACGATTTTCTTTTGCTCTGGTAAGGAGGAGTCTTTTTCAGTCCTGAACCATATGCTTGCCTTTTTTGAGTCCATGTCGGGCCTTAAAATCAACAGGGATAAGTGTCAGCTTCTGGGTATCAATAGCGATGAGAGCAAAGTCAATAGATGGGCTTCGTTGGTTGGTTGCGAGGTAGGATCTTTCCCCTCTTCCTATTTAGGGCTCCCGTTGGGTCACAATCCGAGGAGTTCTTCTTTTTGGGAGCCAGTGGTGGGCAAGGTTAGGAAGAGACTTGCAAGTTGGAAAGAAGCTTCTTTTCCAAGGGTGGAAGGCTTACCCTTATCAAATCCGTCCTGA MKKKLASTFEVPPLSRSPYLTRPIKGFEVGGNKIPLSHLQFADDTIFFCSGKEESFSVLNHMLAFFESMSGLKINRDKCQLLGINSDESKVNRWASLVGCEVGSFPSSYLGLPLGHNPRSSSFWEPVVGKVRKRLASWKEASFPRVEGLPLSNPS Homology
BLAST of Lag0005495.1 vs. NCBI nr
Match: KAA0066908.1 (mitochondrial phosphate carrier protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-30 Identity = 69/127 (54.33%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of Lag0005495.1 vs. NCBI nr
Match: XP_009335445.1 (PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]) HSP 1 Score: 133.3 bits (334), Expect = 1.8e-27 Identity = 63/118 (53.39%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of Lag0005495.1 vs. NCBI nr
Match: PRQ36601.1 (putative RNA-directed DNA polymerase [Rosa chinensis]) HSP 1 Score: 131.7 bits (330), Expect = 5.4e-27 Identity = 60/124 (48.39%), Postives = 83/124 (66.94%), Query Frame = 0
BLAST of Lag0005495.1 vs. NCBI nr
Match: CAN72221.1 (hypothetical protein VITISV_028928 [Vitis vinifera]) HSP 1 Score: 130.6 bits (327), Expect = 1.2e-26 Identity = 57/118 (48.31%), Postives = 81/118 (68.64%), Query Frame = 0
BLAST of Lag0005495.1 vs. NCBI nr
Match: XP_020420593.1 (uncharacterized protein LOC18774736 [Prunus persica]) HSP 1 Score: 130.2 bits (326), Expect = 1.6e-26 Identity = 61/116 (52.59%), Postives = 78/116 (67.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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