IVF0025724.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTCAGCTCGAGGACTTTCGGTGCTCGTCCCAAGAAAACGCGAGCGAGAATGCCCCGGAATCAGTTTTCTCATCCTGGGACAAAAGCGGTCCCCCGACGGTCTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGCCTCATGCTCCGACAACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCGGAGGTAGGCCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTACCAAAAGATGGCCGAAGCTTCCACGAGTGGCGAACGCTTGTCTGGTGTCAGAAACCACTGGAAATGGACTTGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTCCGGTGCTCGTCCCAAGAAAACGCGAACGGGAATGCCCCGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGACGATTTCTTTCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGTGGCGAACGCACGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTGAGCTCGAGGACTTCCGGTGCTCGTCCCAAGAAAACGCGAGCGGAATGCCCCAACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCGGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAAAAACCACTGGAAATGCACTTGCAGCGAAGAAACGGGCTGA ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTCAGCTCGAGGACTTTCGGTGCTCGTCCCAAGAAAACGCGAGCGAGAATGCCCCGGAATCAGTTTTCTCATCCTGGGACAAAAGCGGTCCCCCGACGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGACGATTTCTTTCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCGGAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCGGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAAAAACCACTGGAAATGCACTTGCAGCGAAGAAACGGGCTGA ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTCAGCTCGAGGACTTTCGGTGCTCGTCCCAAGAAAACGCGAGCGAGAATGCCCCGGAATCAGTTTTCTCATCCTGGGACAAAAGCGGTCCCCCGACGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGACGATTTCTTTCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCGGAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCGGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAAAAACCACTGGAAATGCACTTGCAGCGAAGAAACGGGCTGA MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFSRPGVKSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG Homology
BLAST of IVF0025724.2 vs. ExPASy TrEMBL
Match: A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 3.2e-65 Identity = 153/290 (52.76%), Postives = 161/290 (55.52%), Query Frame = 0
BLAST of IVF0025724.2 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 3.3e-46 Identity = 116/233 (49.79%), Postives = 124/233 (53.22%), Query Frame = 0
BLAST of IVF0025724.2 vs. ExPASy TrEMBL
Match: A0A5D3E5W4 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002550 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 9.0e-36 Identity = 98/203 (48.28%), Postives = 108/203 (53.20%), Query Frame = 0
BLAST of IVF0025724.2 vs. ExPASy TrEMBL
Match: A0A5D3CZ27 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00010 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 1.0e-34 Identity = 87/164 (53.05%), Postives = 94/164 (57.32%), Query Frame = 0
BLAST of IVF0025724.2 vs. ExPASy TrEMBL
Match: A0A5D3DIF8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00100 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 9.6e-30 Identity = 84/147 (57.14%), Postives = 92/147 (62.59%), Query Frame = 0
BLAST of IVF0025724.2 vs. NCBI nr
Match: TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 259 bits (661), Expect = 3.13e-79 Identity = 153/290 (52.76%), Postives = 161/290 (55.52%), Query Frame = 0
BLAST of IVF0025724.2 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 197 bits (502), Expect = 2.18e-54 Identity = 116/233 (49.79%), Postives = 124/233 (53.22%), Query Frame = 0
BLAST of IVF0025724.2 vs. NCBI nr
Match: TYK15439.1 (uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 159 bits (403), Expect = 2.32e-45 Identity = 87/164 (53.05%), Postives = 94/164 (57.32%), Query Frame = 0
BLAST of IVF0025724.2 vs. NCBI nr
Match: KAA0035524.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK31010.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 160 bits (406), Expect = 4.24e-44 Identity = 98/203 (48.28%), Postives = 108/203 (53.20%), Query Frame = 0
BLAST of IVF0025724.2 vs. NCBI nr
Match: TYK23424.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 142 bits (359), Expect = 2.70e-35 Identity = 84/147 (57.14%), Postives = 92/147 (62.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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