IVF0020982.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCAGGGGTGGAGGTTGGCGACGGAGCCAGTGCAGGAGGATTTGAGATGGAAGAAGATGGAACCGGAGTCATGACTGGTGAGTCGGAAGGAGCAGTAGGTGGAGCTGGTGGAGAAGAAGCCGGAGCCATAGCTGGTGGTGAAGTTATGGTGGAAGGAGAGGGAGCAAAGCCGGACGGAGCGAGGGATGAAGATGGAGGAGTGGCCACTGTTGGTGGAGGAGCAGATTTAGGAGAGGAGACTGGCGGCGATTTGGTTGGAGAAGAGGCCGGTGCGGCACCCGGAGCTTGGCCAAGAGAGGCGGCGATTAAAGCTAAGAGAACAACGAAGACGAAGGCTGAGGATGAAGCCATGGTCGTGAAGAAGAATGGGAAGAGCAGAAAGAGGAAGATGGAAGAGAGAAGAGAGAAGTTTGAGCTGAAGAGGTTGAAGATGAGAGAAGAGGAGGGTTCTGCAATTGCTTATACCTATATATAA ATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCAGGGGTGGAGGTTGGCGACGGAGCCAGTGCAGGAGGATTTGAGATGGAAGAAGATGGAACCGGAGTCATGACTGGTGAGTCGGAAGGAGCAGTAGGTGGAGCTGGTGGAGAAGAAGCCGGAGCCATAGCTGGTGGTGAAGTTATGGTGGAAGGAGAGGGAGCAAAGCCGGACGGAGCGAGGGATGAAGATGGAGGAGTGGCCACTGTTGGTGGAGGAGCAGATTTAGGAGAGGAGACTGGCGGCGATTTGGTTGGAGAAGAGGCCGGTGCGGCACCCGGAGCTTGGCCAAGAGAGGCGGCGATTAAAGCTAAGAGAACAACGAAGACGAAGGCTGAGGATGAAGCCATGGTCGTGAAGAAGAATGGGAAGAGCAGAAAGAGGAAGATGGAAGAGAGAAGAGAGAAGTTTGAGCTGAAGAGGTTGAAGATGAGAGAAGAGGAGGGTTCTGCAATTGCTTATACCTATATATAA ATGATAGATCCAGAGACGGCGATTCTGTTCACGGAAGCGCCATTGCCAGGGGTGGAGGTTGGCGACGGAGCCAGTGCAGGAGGATTTGAGATGGAAGAAGATGGAACCGGAGTCATGACTGGTGAGTCGGAAGGAGCAGTAGGTGGAGCTGGTGGAGAAGAAGCCGGAGCCATAGCTGGTGGTGAAGTTATGGTGGAAGGAGAGGGAGCAAAGCCGGACGGAGCGAGGGATGAAGATGGAGGAGTGGCCACTGTTGGTGGAGGAGCAGATTTAGGAGAGGAGACTGGCGGCGATTTGGTTGGAGAAGAGGCCGGTGCGGCACCCGGAGCTTGGCCAAGAGAGGCGGCGATTAAAGCTAAGAGAACAACGAAGACGAAGGCTGAGGATGAAGCCATGGTCGTGAAGAAGAATGGGAAGAGCAGAAAGAGGAAGATGGAAGAGAGAAGAGAGAAGTTTGAGCTGAAGAGGTTGAAGATGAGAGAAGAGGAGGGTTCTGCAATTGCTTATACCTATATATAA MIDPETAILFTEAPLPGVEVGDGASAGGFEMEEDGTGVMTGESEGAVGGAGGEEAGAIAGGEVMVEGEGAKPDGARDEDGGVATVGGGADLGEETGGDLVGEEAGAAPGAWPREAAIKAKRTTKTKAEDEAMVVKKNGKSRKRKMEERREKFELKRLKMREEEGSAIAYTYI Homology
BLAST of IVF0020982.1 vs. ExPASy TrEMBL
Match: A0A0A0LJM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889920 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.9e-55 Identity = 127/145 (87.59%), Postives = 137/145 (94.48%), Query Frame = 0
BLAST of IVF0020982.1 vs. ExPASy TrEMBL
Match: A0A6J1C301 (circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111007891 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 5.1e-32 Identity = 100/154 (64.94%), Postives = 106/154 (68.83%), Query Frame = 0
BLAST of IVF0020982.1 vs. NCBI nr
Match: KGN60236.1 (hypothetical protein Csa_001434 [Cucumis sativus]) HSP 1 Score: 222 bits (566), Expect = 1.73e-71 Identity = 128/142 (90.14%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of IVF0020982.1 vs. NCBI nr
Match: XP_022136125.1 (circumsporozoite protein-like [Momordica charantia]) HSP 1 Score: 148 bits (373), Expect = 5.05e-42 Identity = 96/139 (69.06%), Postives = 100/139 (71.94%), Query Frame = 0
BLAST of IVF0020982.1 vs. NCBI nr
Match: KAF5444827.1 (hypothetical protein F2P56_033926 [Juglans regia]) HSP 1 Score: 59.7 bits (143), Expect = 4.65e-08 Identity = 61/113 (53.98%), Postives = 67/113 (59.29%), Query Frame = 0
BLAST of IVF0020982.1 vs. NCBI nr
Match: KAF3435056.1 (hypothetical protein FNV43_RR22143 [Rhamnella rubrinervis]) HSP 1 Score: 50.8 bits (120), Expect = 1.29e-04 Identity = 55/112 (49.11%), Postives = 62/112 (55.36%), Query Frame = 0
BLAST of IVF0020982.1 vs. NCBI nr
Match: XP_023520820.1 (uncharacterized protein LOC111784314 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 51.2 bits (121), Expect = 4.36e-04 Identity = 38/80 (47.50%), Postives = 42/80 (52.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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