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IVF0017513.2 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGACTGGTTGGAGGTGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTCTTTTTAAAACAAGGGTAA ATGACGACTGGTTGGAGGTGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTCTTTTTAAAACAAGGGTAA ATGACGACTGGTTGGAGGTGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTCTTTTTAAAACAAGGGTAA MTTGWRWKKLWLEAEEVVVGGGRSCGWRPKMTTGWRRKKASLEAKEGVVGGGRRRRAEEGVLENGKAEEGRKSRRRMEEEKFAPGFFLKQG Homology
BLAST of IVF0017513.2 vs. ExPASy TrEMBL
Match: A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31 Identity = 76/88 (86.36%), Postives = 78/88 (88.64%), Query Frame = 0
BLAST of IVF0017513.2 vs. ExPASy TrEMBL
Match: A0A5D3CTI7 (Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00120 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 8.4e-18 Identity = 65/103 (63.11%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of IVF0017513.2 vs. ExPASy TrEMBL
Match: A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 5.6e-14 Identity = 60/111 (54.05%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of IVF0017513.2 vs. ExPASy TrEMBL
Match: A0A5A7TUB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00040 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 9.0e-12 Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of IVF0017513.2 vs. ExPASy TrEMBL
Match: A0A5D3BFA0 (S-antigen protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15972G00010 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.8e-11 Identity = 42/69 (60.87%), Postives = 44/69 (63.77%), Query Frame = 0
BLAST of IVF0017513.2 vs. NCBI nr
Match: KAA0025306.1 (hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (362), Expect = 1.51e-41 Identity = 76/88 (86.36%), Postives = 78/88 (88.64%), Query Frame = 0
BLAST of IVF0017513.2 vs. NCBI nr
Match: KAA0063229.1 (lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 97.8 bits (242), Expect = 7.15e-22 Identity = 65/103 (63.11%), Postives = 69/103 (66.99%), Query Frame = 0
BLAST of IVF0017513.2 vs. NCBI nr
Match: KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa]) HSP 1 Score: 85.1 bits (209), Expect = 4.03e-17 Identity = 60/111 (54.05%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of IVF0017513.2 vs. NCBI nr
Match: KAA0047052.1 (hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 79.7 bits (195), Expect = 2.03e-16 Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of IVF0017513.2 vs. NCBI nr
Match: TYJ97125.1 (S-antigen protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 3.59e-16 Identity = 42/69 (60.87%), Postives = 44/69 (63.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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