IVF0017513 (gene) Melon (IVF77) v1

Overview
NameIVF0017513
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLon protease 2-like
Locationchr04: 21305307 .. 21305582 (-)
RNA-Seq ExpressionIVF0017513
SyntenyIVF0017513
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACTGGTTGGAGGTGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTCTTTTTAAAACAAGGGTAA

mRNA sequence

ATGACGACTGGTTGGAGGTGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTCTTTTTAAAACAAGGGTAA

Coding sequence (CDS)

ATGACGACTGGTTGGAGGTGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGGCGGAAGAAGTTGTGGTTGGAGACCGAAGATGACGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGAAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGGAAGAAGGCGTTCTTGAGAATGGTAAGGCGGAAGAAGGGAGAAAATCACGCAGACGAATGGAGGAGGAGAAATTCGCGCCAGGATTCTTTTTAAAACAAGGGTAA

Protein sequence

MTTGWRWKKLWLEAEEVVVGGGRSCGWRPKMTTGWRRKKASLEAKEGVVGGGRRRRAEEGVLENGKAEEGRKSRRRMEEEKFAPGFFLKQG
Homology
BLAST of IVF0017513 vs. ExPASy TrEMBL
Match: A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31
Identity = 76/88 (86.36%), Postives = 78/88 (88.64%), Query Frame = 0

Query: 14  AEEVVVGGGRSCGWRPKMTTGWRRKKASLEAKEGVVGGGRRRRAEEGVLENGKAEE---- 73
           AEEVVVGGGRSCGWRPKMTTGWR+KKASLEAKEG+VGGGRRRRAEEGVLENGKAEE    
Sbjct: 82  AEEVVVGGGRSCGWRPKMTTGWRQKKASLEAKEGIVGGGRRRRAEEGVLENGKAEEGRKS 141

Query: 74  ------GRKSRRRMEEEKFAPGFFLKQG 92
                 GRKSRRRMEEEKFAPGFFLKQG
Sbjct: 142 WRIYWRGRKSRRRMEEEKFAPGFFLKQG 169

BLAST of IVF0017513 vs. ExPASy TrEMBL
Match: A0A5D3CTI7 (Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00120 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.4e-18
Identity = 65/103 (63.11%), Postives = 69/103 (66.99%), Query Frame = 0

Query: 1  MTTGWRWKKLWLEAEEVVVGGGRSCGWRPKMTTGWRRKKASLEAKEGVVGGGRRRRAEEG 60
          M TGWR KK  LEAEE VVGG        ++   WRRKK  LEA+EGVVGGGRRRRA+EG
Sbjct: 1  MMTGWRRKKASLEAEEGVVGG--------RIRRRWRRKKTFLEAEEGVVGGGRRRRAKEG 60

Query: 61 VL--ENGKAEE----------GRKSRRRMEEEKFAPGFFLKQG 92
          VL  ENGK EE          GRKSRR MEEEKFA  FFLKQG
Sbjct: 61 VLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95

BLAST of IVF0017513 vs. ExPASy TrEMBL
Match: A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.6e-14
Identity = 60/111 (54.05%), Postives = 62/111 (55.86%), Query Frame = 0

Query: 4   GWRWKKLWLEAEEVVVGGGRSCGWRPKMTTGWRRKKASLEAKEGVVGG------------ 63
           GWR KKLWLE E+          W       W      LEA+EGVVGG            
Sbjct: 8   GWRRKKLWLETED--------DDWLETEDDDW------LEAEEGVVGGERRRRWRRNKAS 67

Query: 64  -GRRRRAEEGVLENGKAEE----------GRKSRRRMEEEKFAPGFFLKQG 92
            GRRRRAEEGVLENGKAEE          GRKSRRRMEEEKFAPG FLKQG
Sbjct: 68  CGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 104

BLAST of IVF0017513 vs. ExPASy TrEMBL
Match: A0A5A7TUB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G00040 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 9.0e-12
Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 18 VVGGGRSC--------GWRPKMTTGWRRKKASLEAKEGVVGGGRRRRAEEGVL 63
          +VGGGRSC        GWRPKMTTGWRRKKASLEA EGVVGGG RRRAEEGV+
Sbjct: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVV 53

BLAST of IVF0017513 vs. ExPASy TrEMBL
Match: A0A5D3BFA0 (S-antigen protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15972G00010 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.8e-11
Identity = 42/69 (60.87%), Postives = 44/69 (63.77%), Query Frame = 0

Query: 1  MTTGWRWKKLWLEAEEVVVGGGRSCGWRPKMT--------------TGWRRKKASLEAKE 56
          M TGWR KKLWLEAEE VVGGGR  GWR K                 GWRRKKASLEA+E
Sbjct: 1  MMTGWRRKKLWLEAEEGVVGGGRRRGWRLKKAWLEAEEGVVGGGRRRGWRRKKASLEAEE 60

BLAST of IVF0017513 vs. NCBI nr
Match: KAA0025306.1 (hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (362), Expect = 1.51e-41
Identity = 76/88 (86.36%), Postives = 78/88 (88.64%), Query Frame = 0

Query: 14  AEEVVVGGGRSCGWRPKMTTGWRRKKASLEAKEGVVGGGRRRRAEEGVLENGKAEEGRKS 73
           AEEVVVGGGRSCGWRPKMTTGWR+KKASLEAKEG+VGGGRRRRAEEGVLENGKAEEGRKS
Sbjct: 82  AEEVVVGGGRSCGWRPKMTTGWRQKKASLEAKEGIVGGGRRRRAEEGVLENGKAEEGRKS 141

Query: 74  ----------RRRMEEEKFAPGFFLKQG 91
                     RRRMEEEKFAPGFFLKQG
Sbjct: 142 WRIYWRGRKSRRRMEEEKFAPGFFLKQG 169

BLAST of IVF0017513 vs. NCBI nr
Match: KAA0063229.1 (lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 7.15e-22
Identity = 65/103 (63.11%), Postives = 69/103 (66.99%), Query Frame = 0

Query: 1  MTTGWRWKKLWLEAEEVVVGGGRSCGWRPKMTTGWRRKKASLEAKEGVVGGGRRRRAEEG 60
          M TGWR KK  LEAEE VVGG        ++   WRRKK  LEA+EGVVGGGRRRRA+EG
Sbjct: 1  MMTGWRRKKASLEAEEGVVGG--------RIRRRWRRKKTFLEAEEGVVGGGRRRRAKEG 60

Query: 61 VL--ENGKAEEGRKS----------RRRMEEEKFAPGFFLKQG 91
          VL  ENGK EEGRKS          RR MEEEKFA  FFLKQG
Sbjct: 61 VLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95

BLAST of IVF0017513 vs. NCBI nr
Match: KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 4.03e-17
Identity = 60/111 (54.05%), Postives = 62/111 (55.86%), Query Frame = 0

Query: 4   GWRWKKLWLEAEEVVVGGGRSCGWRPKMTTGWRRKKASLEAKEGVVGG------------ 63
           GWR KKLWLE E+          W       W      LEA+EGVVGG            
Sbjct: 8   GWRRKKLWLETEDD--------DWLETEDDDW------LEAEEGVVGGERRRRWRRNKAS 67

Query: 64  -GRRRRAEEGVLENGKAEE----------GRKSRRRMEEEKFAPGFFLKQG 91
            GRRRRAEEGVLENGKAEE          GRKSRRRMEEEKFAPG FLKQG
Sbjct: 68  CGRRRRAEEGVLENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 104

BLAST of IVF0017513 vs. NCBI nr
Match: KAA0047052.1 (hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 2.03e-16
Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 18 VVGGGRSCGWR--------PKMTTGWRRKKASLEAKEGVVGGGRRRRAEEGVL 62
          +VGGGRSCGWR        PKMTTGWRRKKASLEA EGVVGGG RRRAEEGV+
Sbjct: 1  MVGGGRSCGWRLKMTTGWRPKMTTGWRRKKASLEANEGVVGGGTRRRAEEGVV 53

BLAST of IVF0017513 vs. NCBI nr
Match: TYJ97125.1 (S-antigen protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 3.59e-16
Identity = 42/69 (60.87%), Postives = 44/69 (63.77%), Query Frame = 0

Query: 1  MTTGWRWKKLWLEAEEVVVGGGRSCGWRPKMT--------------TGWRRKKASLEAKE 55
          M TGWR KKLWLEAEE VVGGGR  GWR K                 GWRRKKASLEA+E
Sbjct: 1  MMTGWRRKKLWLEAEEGVVGGGRRRGWRLKKAWLEAEEGVVGGGRRRGWRRKKASLEAEE 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SHI41.3e-3186.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CTI78.4e-1863.11Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G... [more]
A0A5D3CCS95.6e-1454.0550S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A5A7TUB69.0e-1277.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BFA05.8e-1160.87S-antigen protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
Match NameE-valueIdentityDescription
KAA0025306.11.51e-4186.36hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa][more]
KAA0063229.17.15e-2263.11lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [... [more]
KAA0034559.14.03e-1754.0550S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal p... [more]
KAA0047052.12.03e-1677.36hypothetical protein E6C27_scaffold466G00040 [Cucumis melo var. makuwa][more]
TYJ97125.13.59e-1660.87S-antigen protein-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0017513.2IVF0017513.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005840 ribosome