IVF0007640.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCAGATGGGATGAAATATTTTCTCTTCCAGTACAGAATCAGCCAACCTTGGTTTTTTCTTCAGCTGATCTTATGTGGTCTAAGGTAGAAGGATGTGACAACATGGATAGAGTTGTTGTAATCCCTTTTGGTAGAGTTGGTGATTTTGTGCGGGATGAGTCTTCAAATAAAAGTTGTCCAACCAGATTTCATGTTGAAGCAAGGCGGCGACGAGCATCAAAAGCACCTTCCAAGGCAAAAGTTGATGGTGTACTAGAATGCATTTTGTAAGTCCCACATTTATGTATTTCTATAATATGTACAGATGTTTTCATGTAATTATTTTTATTGTTTCTTCAAGTTTAAGAGTTTAGTTATTTCATTGAATATGTAGATATTGGTGTTTGCTTGGACCTGATGACCAGGAATTAGCAATGTCAGCATTATGTTCTCCTTCATGCATAACCATGGTGGCAAATTGTATGTAA ATGTCCAGATGGGATGAAATATTTTCTCTTCCAGTACAGAATCAGCCAACCTTGGTTTTTTCTTCAGCTGATCTTATGTGGTCTAAGGTAGAAGGATGTGACAACATGGATAGAGTTGTTGTAATCCCTTTTGGTAGAGTTGGTGATTTTGTGCGGGATGAGTCTTCAAATAAAAGTTGTCCAACCAGATTTCATGTTGAAGCAAGGCGGCGACGAGCATCAAAAGCACCTTCCAAGGCAAAAGTTGATGGTGTACTAGAATGCATTTTATATTGGTGTTTGCTTGGACCTGATGACCAGGAATTAGCAATGTCAGCATTATGTTCTCCTTCATGCATAACCATGGTGGCAAATTGTATGTAA ATGTCCAGATGGGATGAAATATTTTCTCTTCCAGTACAGAATCAGCCAACCTTGGTTTTTTCTTCAGCTGATCTTATGTGGTCTAAGGTAGAAGGATGTGACAACATGGATAGAGTTGTTGTAATCCCTTTTGGTAGAGTTGGTGATTTTGTGCGGGATGAGTCTTCAAATAAAAGTTGTCCAACCAGATTTCATGTTGAAGCAAGGCGGCGACGAGCATCAAAAGCACCTTCCAAGGCAAAAGTTGATGGTGTACTAGAATGCATTTTATATTGGTGTTTGCTTGGACCTGATGACCAGGAATTAGCAATGTCAGCATTATGTTCTCCTTCATGCATAACCATGGTGGCAAATTGTATGTAA MSRWDEIFSLPVQNQPTLVFSSADLMWSKVEGCDNMDRVVVIPFGRVGDFVRDESSNKSCPTRFHVEARRRRASKAPSKAKVDGVLECILYWCLLGPDDQELAMSALCSPSCITMVANCM Homology
BLAST of IVF0007640.1 vs. ExPASy TrEMBL
Match: A0A5A7T5N1 (CUE domain-containing 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9475G00090 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.9e-62 Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0
BLAST of IVF0007640.1 vs. ExPASy TrEMBL
Match: A0A5D3C2W2 (CUE domain-containing 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00500 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of IVF0007640.1 vs. ExPASy TrEMBL
Match: A0A1S3BBT3 (uncharacterized protein LOC103488340 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488340 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40 Identity = 85/100 (85.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of IVF0007640.1 vs. ExPASy TrEMBL
Match: A0A5A7T2B2 (Zinc ion binding protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9475G00100 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40 Identity = 85/100 (85.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of IVF0007640.1 vs. ExPASy TrEMBL
Match: A0A0A0LYJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538200 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40 Identity = 85/100 (85.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of IVF0007640.1 vs. NCBI nr
Match: KAA0036917.1 (CUE domain-containing 5 [Cucumis melo var. makuwa]) HSP 1 Score: 244 bits (623), Expect = 1.79e-81 Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0
BLAST of IVF0007640.1 vs. NCBI nr
Match: TYK05542.1 (CUE domain-containing 5 [Cucumis melo var. makuwa]) HSP 1 Score: 199 bits (506), Expect = 5.64e-64 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of IVF0007640.1 vs. NCBI nr
Match: XP_004135549.1 (uncharacterized protein LOC101211068 [Cucumis sativus] >XP_031745229.1 uncharacterized protein LOC101211068 [Cucumis sativus] >KGN65922.1 hypothetical protein Csa_023281 [Cucumis sativus]) HSP 1 Score: 172 bits (435), Expect = 5.75e-47 Identity = 85/102 (83.33%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of IVF0007640.1 vs. NCBI nr
Match: XP_008445298.1 (PREDICTED: uncharacterized protein LOC103488340 isoform X2 [Cucumis melo] >KAA0036918.1 Zinc ion binding protein isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 172 bits (435), Expect = 5.75e-47 Identity = 85/102 (83.33%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of IVF0007640.1 vs. NCBI nr
Match: XP_008445266.1 (PREDICTED: uncharacterized protein LOC103488340 isoform X1 [Cucumis melo] >XP_008445273.1 PREDICTED: uncharacterized protein LOC103488340 isoform X1 [Cucumis melo] >XP_008445282.1 PREDICTED: uncharacterized protein LOC103488340 isoform X1 [Cucumis melo]) HSP 1 Score: 172 bits (435), Expect = 6.12e-47 Identity = 85/102 (83.33%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of IVF0007640.1 vs. TAIR 10
Match: AT4G13970.1 (zinc ion binding ) HSP 1 Score: 141.4 bits (355), Expect = 4.9e-34 Identity = 67/100 (67.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of IVF0007640.1 vs. TAIR 10
Match: AT1G60560.2 (SWIM zinc finger family protein ) HSP 1 Score: 87.4 bits (215), Expect = 8.4e-18 Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of IVF0007640.1 vs. TAIR 10
Match: AT1G60560.1 (SWIM zinc finger family protein ) HSP 1 Score: 87.4 bits (215), Expect = 8.4e-18 Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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