IVF0006536.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAATTCTTCCTGCCTATCGAGAATGCAAGAAGAAGGCAGGACCTAAAGGTCTTCAGACATAGGGATAGAGAGAATTTGAATGACGCATGGTCGATATCCAAGCGTTTGGTGAAAGCATGCCTCCATCATGGCATATCTAAATGTGTGTTGATGGAGAAATTCTACTTTCGGCTAAGTGAGGATGCTCAACAAACTGTTGATGTTGTGTTTGTAGGAGGAGTGTTGAGAAATTCCTACAACCAGACTAAAACAATGCTGGACACCATGATTAGCAATAGCCAAGAATGTAGGGATGATTGCATTAGTTCGCAGCAAGAGAATGGAGAAAACAGAGGAAGAACAGACGAGGGAATGGATAGAAACGCAATGGTGACATTACAAGGACAAGTTACTGAAATGAACAAGTTGCTAAGTCCATGGTGTTATCGAAAGTAA ATGAAGAAATTCTTCCTGCCTATCGAGAATGCAAGAAGAAGGCAGGACCTAAAGGTCTTCAGACATAGGGATAGAGAGAATTTGAATGACGCATGGTCGATATCCAAGCGTTTGGTGAAAGCATGCCTCCATCATGGCATATCTAAATGTGTGTTGATGGAGAAATTCTACTTTCGGCTAAGTGAGGATGCTCAACAAACTGTTGATGTTGTGTTTGTAGGAGGAGTGTTGAGAAATTCCTACAACCAGACTAAAACAATGCTGGACACCATGATTAGCAATAGCCAAGAATGTAGGGATGATTGCATTAGTTCGCAGCAAGAGAATGGAGAAAACAGAGGAAGAACAGACGAGGGAATGGATAGAAACGCAATGGTGACATTACAAGGACAAGTTACTGAAATGAACAAGTTGCTAAGTCCATGGTGTTATCGAAAGTAA ATGAAGAAATTCTTCCTGCCTATCGAGAATGCAAGAAGAAGGCAGGACCTAAAGGTCTTCAGACATAGGGATAGAGAGAATTTGAATGACGCATGGTCGATATCCAAGCGTTTGGTGAAAGCATGCCTCCATCATGGCATATCTAAATGTGTGTTGATGGAGAAATTCTACTTTCGGCTAAGTGAGGATGCTCAACAAACTGTTGATGTTGTGTTTGTAGGAGGAGTGTTGAGAAATTCCTACAACCAGACTAAAACAATGCTGGACACCATGATTAGCAATAGCCAAGAATGTAGGGATGATTGCATTAGTTCGCAGCAAGAGAATGGAGAAAACAGAGGAAGAACAGACGAGGGAATGGATAGAAACGCAATGGTGACATTACAAGGACAAGTTACTGAAATGAACAAGTTGCTAAGTCCATGGTGTTATCGAAAGTAA MKKFFLPIENARRRQDLKVFRHRDRENLNDAWSISKRLVKACLHHGISKCVLMEKFYFRLSEDAQQTVDVVFVGGVLRNSYNQTKTMLDTMISNSQECRDDCISSQQENGENRGRTDEGMDRNAMVTLQGQVTEMNKLLSPWCYRK Homology
BLAST of IVF0006536.1 vs. ExPASy TrEMBL
Match: A0A5A7TUE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00450 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.0e-77 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of IVF0006536.1 vs. ExPASy TrEMBL
Match: A0A5A7V1F3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002850 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 2.2e-28 Identity = 64/97 (65.98%), Postives = 82/97 (84.54%), Query Frame = 0
BLAST of IVF0006536.1 vs. ExPASy TrEMBL
Match: A0A5D3CC26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00270 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 3.8e-28 Identity = 69/124 (55.65%), Postives = 88/124 (70.97%), Query Frame = 0
BLAST of IVF0006536.1 vs. ExPASy TrEMBL
Match: A0A0A0K6F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307410 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 2.7e-26 Identity = 66/121 (54.55%), Postives = 86/121 (71.07%), Query Frame = 0
BLAST of IVF0006536.1 vs. ExPASy TrEMBL
Match: A0A5D3DR17 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00450 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.8e-23 Identity = 64/117 (54.70%), Postives = 84/117 (71.79%), Query Frame = 0
BLAST of IVF0006536.1 vs. NCBI nr
Match: KAA0046468.1 (hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa] >TYJ97743.1 hypothetical protein E5676_scaffold1251G00450 [Cucumis melo var. makuwa]) HSP 1 Score: 298 bits (763), Expect = 5.52e-102 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of IVF0006536.1 vs. NCBI nr
Match: KAA0048713.1 (hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa] >TYK07916.1 hypothetical protein E5676_scaffold265G00270 [Cucumis melo var. makuwa]) HSP 1 Score: 135 bits (340), Expect = 4.27e-35 Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 0
BLAST of IVF0006536.1 vs. NCBI nr
Match: KGN44484.1 (hypothetical protein Csa_015918 [Cucumis sativus]) HSP 1 Score: 129 bits (323), Expect = 9.05e-35 Identity = 66/121 (54.55%), Postives = 85/121 (70.25%), Query Frame = 0
BLAST of IVF0006536.1 vs. NCBI nr
Match: KAA0061983.1 (uncharacterized protein E6C27_scaffold89G002850 [Cucumis melo var. makuwa]) HSP 1 Score: 134 bits (337), Expect = 3.15e-34 Identity = 64/97 (65.98%), Postives = 82/97 (84.54%), Query Frame = 0
BLAST of IVF0006536.1 vs. NCBI nr
Match: KGN53801.1 (hypothetical protein Csa_014772 [Cucumis sativus]) HSP 1 Score: 120 bits (300), Expect = 1.05e-31 Identity = 62/105 (59.05%), Postives = 76/105 (72.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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