IVF0004773.1 (mRNA) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTTGTTGGAGGCAGAATAAGGCGTCGTTGGAGGCGAAAGAAGACATTCTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGAAAGAAGGCGTTCTTAACGTGGAGAATGGTAAAGATGAAGAAGGGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCGCGCAGAGGAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAAAACAAGGGTAA ATGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTTGTTGGAGGCAGAATAAGGCGTCGTTGGAGGCGAAAGAAGACATTCTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGAAAGAAGGCGTTCTTAACGTGGAGAATGGTAAAGATGAAGAAGGGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCGCGCAGAGGAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAAAACAAGGGTAA ATGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTTGTTGGAGGCAGAATAAGGCGTCGTTGGAGGCGAAAGAAGACATTCTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGAAAGAAGGCGTTCTTAACGTGGAGAATGGTAAAGATGAAGAAGGGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCGCGCAGAGGAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAAAACAAGGGTAA MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG Homology
BLAST of IVF0004773.1 vs. ExPASy TrEMBL
Match: A0A5D3CTI7 (Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00120 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of IVF0004773.1 vs. ExPASy TrEMBL
Match: A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22 Identity = 65/95 (68.42%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of IVF0004773.1 vs. ExPASy TrEMBL
Match: A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 7.8e-19 Identity = 66/108 (61.11%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of IVF0004773.1 vs. ExPASy TrEMBL
Match: A0A5A7TVG1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00760 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 6.4e-13 Identity = 43/60 (71.67%), Postives = 46/60 (76.67%), Query Frame = 0
BLAST of IVF0004773.1 vs. ExPASy TrEMBL
Match: A0A5D3BFA0 (S-antigen protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15972G00010 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.7e-11 Identity = 43/60 (71.67%), Postives = 45/60 (75.00%), Query Frame = 0
BLAST of IVF0004773.1 vs. NCBI nr
Match: KAA0063229.1 (lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 187 bits (476), Expect = 1.65e-56 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of IVF0004773.1 vs. NCBI nr
Match: KAA0025306.1 (hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa]) HSP 1 Score: 114 bits (285), Expect = 8.15e-30 Identity = 65/95 (68.42%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of IVF0004773.1 vs. NCBI nr
Match: KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (254), Expect = 1.62e-23 Identity = 66/108 (61.11%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of IVF0004773.1 vs. NCBI nr
Match: TYJ97125.1 (S-antigen protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 78.2 bits (191), Expect = 9.89e-17 Identity = 43/60 (71.67%), Postives = 45/60 (75.00%), Query Frame = 0
BLAST of IVF0004773.1 vs. NCBI nr
Match: KAA0046136.1 (hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa]) HSP 1 Score: 82.8 bits (203), Expect = 2.98e-16 Identity = 43/60 (71.67%), Postives = 46/60 (76.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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