IVF0004773 (gene) Melon (IVF77) v1

Overview
NameIVF0004773
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLon protease 2-like
Locationchr04: 4118358 .. 4118642 (-)
RNA-Seq ExpressionIVF0004773
SyntenyIVF0004773
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTTGTTGGAGGCAGAATAAGGCGTCGTTGGAGGCGAAAGAAGACATTCTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGAAAGAAGGCGTTCTTAACGTGGAGAATGGTAAAGATGAAGAAGGGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCGCGCAGAGGAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAAAACAAGGGTAA

mRNA sequence

ATGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTTGTTGGAGGCAGAATAAGGCGTCGTTGGAGGCGAAAGAAGACATTCTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGAAAGAAGGCGTTCTTAACGTGGAGAATGGTAAAGATGAAGAAGGGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCGCGCAGAGGAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAAAACAAGGGTAA

Coding sequence (CDS)

ATGACTGGTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTTGTTGGAGGCAGAATAAGGCGTCGTTGGAGGCGAAAGAAGACATTCTTGGAGGCGGAAGAAGGCGTCGTTGGAGGCGGAAGAAGGCGTCGTGCGAAAGAAGGCGTTCTTAACGTGGAGAATGGTAAAGATGAAGAAGGGAGAAAATCGTGGAGAATATATTGGAGAGGGAGAAAATCGCGCAGAGGAATGGAGGAGGAGAAATTCGCGTCAGTATTCTTTTTAAAACAAGGGTAA

Protein sequence

MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG
Homology
[Close]
BLAST of IVF0004773 vs. ExPASy TrEMBL
Match: A0A5D3CTI7 (Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G00120 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKD 60
          MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKD
Sbjct: 2  MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKD 61

Query: 61 EEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95
          EEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG
Sbjct: 62 EEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95

[Close]
BLAST of IVF0004773 vs. ExPASy TrEMBL
Match: A0A5A7SHI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G001610 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22
Identity = 65/95 (68.42%), Postives = 71/95 (74.74%), Query Frame = 0 

Query: 8   KASLEAEEGVVGG--------RIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGK 67
           K    AEE VVGG        ++   WR+KK  LEA+EG+VGGGRRRRA+EGVL  ENGK
Sbjct: 77  KEQKNAEEVVVGGGRSCGWRPKMTTGWRQKKASLEAKEGIVGGGRRRRAEEGVL--ENGK 136

Query: 68  DEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95
            EEGRKSWRIYWRGRKSRR MEEEKFA  FFLKQG
Sbjct: 137 AEEGRKSWRIYWRGRKSRRRMEEEKFAPGFFLKQG 169

[Close]
BLAST of IVF0004773 vs. ExPASy TrEMBL
Match: A0A5D3CCS9 (50S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001030 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 7.8e-19
Identity = 66/108 (61.11%), Postives = 67/108 (62.04%), Query Frame = 0 

Query: 3   GWRRKKA----------------SLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRR 62
           GWRRKK                  LEAEEGVVGG  RRRWRR K            GRRR
Sbjct: 8   GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNK---------ASCGRRR 67

Query: 63  RAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95
           RA+EGVL  ENGK EE RKSWRIYWRGRKSRR MEEEKFA   FLKQG
Sbjct: 68  RAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 104

[Close]
BLAST of IVF0004773 vs. ExPASy TrEMBL
Match: A0A5A7TVG1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00760 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.4e-13
Identity = 43/60 (71.67%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 26 WRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKF 85
          WR+KK +LEAE             EGVLNVENGKDE+GRKSWRIYWRGRKSRRGMEEEKF
Sbjct: 5  WRQKKLWLEAE-------------EGVLNVENGKDEKGRKSWRIYWRGRKSRRGMEEEKF 51

[Close]
BLAST of IVF0004773 vs. ExPASy TrEMBL
Match: A0A5D3BFA0 (S-antigen protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15972G00010 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.7e-11
Identity = 43/60 (71.67%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 1  MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRR--RAKEGVLNVENG 59
          MTGWRRKK  LEAEEGVVGG  RR WR KK +LEAEEGVVGGGRRR  R K+  L  E G
Sbjct: 2  MTGWRRKKLWLEAEEGVVGGGRRRGWRLKKAWLEAEEGVVGGGRRRGWRRKKASLEAEEG 61

[Close]
BLAST of IVF0004773 vs. NCBI nr
Match: KAA0063229.1 (lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (476), Expect = 1.65e-56
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKD 60
          MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKD
Sbjct: 2  MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKD 61

Query: 61 EEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 94
          EEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG
Sbjct: 62 EEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 95

[Close]
BLAST of IVF0004773 vs. NCBI nr
Match: KAA0025306.1 (hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (285), Expect = 8.15e-30
Identity = 65/95 (68.42%), Postives = 71/95 (74.74%), Query Frame = 0 

Query: 8   KASLEAEEGVVGG--------RIRRRWRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGK 67
           K    AEE VVGG        ++   WR+KK  LEA+EG+VGGGRRRRA+EGVL  ENGK
Sbjct: 77  KEQKNAEEVVVGGGRSCGWRPKMTTGWRQKKASLEAKEGIVGGGRRRRAEEGVL--ENGK 136

Query: 68  DEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 94
            EEGRKSWRIYWRGRKSRR MEEEKFA  FFLKQG
Sbjct: 137 AEEGRKSWRIYWRGRKSRRRMEEEKFAPGFFLKQG 169

[Close]
BLAST of IVF0004773 vs. NCBI nr
Match: KAA0034559.1 (50S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal protein L15 [Cucumis melo var. makuwa])

HSP 1 Score: 102 bits (254), Expect = 1.62e-23
Identity = 66/108 (61.11%), Postives = 67/108 (62.04%), Query Frame = 0 

Query: 3   GWRRKKASLE----------------AEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRR 62
           GWRRKK  LE                AEEGVVGG  RRRWRR K            GRRR
Sbjct: 8   GWRRKKLWLETEDDDWLETEDDDWLEAEEGVVGGERRRRWRRNKASC---------GRRR 67

Query: 63  RAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKFASVFFLKQG 94
           RA+EGVL  ENGK EE RKSWRIYWRGRKSRR MEEEKFA   FLKQG
Sbjct: 68  RAEEGVL--ENGKAEEVRKSWRIYWRGRKSRRRMEEEKFAPGLFLKQG 104

[Close]
BLAST of IVF0004773 vs. NCBI nr
Match: TYJ97125.1 (S-antigen protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 9.89e-17
Identity = 43/60 (71.67%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 1  MTGWRRKKASLEAEEGVVGGRIRRRWRRKKTFLEAEEGVVGGGRRR--RAKEGVLNVENG 58
          MTGWRRKK  LEAEEGVVGG  RR WR KK +LEAEEGVVGGGRRR  R K+  L  E G
Sbjct: 2  MTGWRRKKLWLEAEEGVVGGGRRRGWRLKKAWLEAEEGVVGGGRRRGWRRKKASLEAEEG 61

[Close]
BLAST of IVF0004773 vs. NCBI nr
Match: KAA0046136.1 (hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 2.98e-16
Identity = 43/60 (71.67%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 26 WRRKKTFLEAEEGVVGGGRRRRAKEGVLNVENGKDEEGRKSWRIYWRGRKSRRGMEEEKF 85
          WR+KK +LEAEEGV             LNVENGKDE+GRKSWRIYWRGRKSRRGMEEEKF
Sbjct: 5  WRQKKLWLEAEEGV-------------LNVENGKDEKGRKSWRIYWRGRKSRRGMEEEKF 51

The following BLAST results are available for this feature:
BLAST of IVF0004773 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0004773 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CTI71.1e-44100.00Lon protease 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold556G... [more]
A0A5A7SHI41.5e-2268.42Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CCS97.8e-1961.1150S ribosomal protein L15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A5A7TVG16.4e-1371.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BFA02.7e-1171.67S-antigen protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
BLAST of IVF0004773 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0063229.11.65e-56100.00lon protease 2-like [Cucumis melo var. makuwa] >TYK13479.1 lon protease 2-like [... [more]
KAA0025306.18.15e-3068.42hypothetical protein E6C27_scaffold541G001610 [Cucumis melo var. makuwa][more]
KAA0034559.11.62e-2361.1150S ribosomal protein L15 [Cucumis melo var. makuwa] >TYK09112.1 50S ribosomal p... [more]
TYJ97125.19.89e-1771.67S-antigen protein-like [Cucumis melo var. makuwa][more]
KAA0046136.12.98e-1671.67hypothetical protein E6C27_scaffold157G00760 [Cucumis melo var. makuwa][more]
BLAST of IVF0004773 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004773.1IVF0004773.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0044391 ribosomal subunit
molecular_function GO:0008233 peptidase activity