HG10019203.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCCTTCGATCTCTCAGCCGAATTTTGGCGCACAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACCAGGAGGTTTGTACTGCTTCATGGACGTCGGAGGAGTATGCGATATGGCTGCGTTTGTAGAAGGTTGAGTTTCCGTTGCTCTGCTCAGGATACTGATAAGGAAAGCAATGGTAAGTTTTAACTGCTTTGCTTCTGCTTTTGCTTCTAGCGTTCTTCTTTTTCTTATGTGTTTTTCTTGTTCAGTGCATTTGCTTTGCTTGTATTTTCTTGGTGATTGAATGTTCGTTGTCGTAGACTTCGTTTTACTTATATTGAAAGCGAGAGATAAAGAGGTTACTAATTAACTGGCTTAGATGAGGCAATGGTTACTGATGTGGTTTTGTTCGGGTGGTCTGTCGTTCTCAATCCTGAACTATCTTGCGTTGTAGACTACCATGCGAGCATTCATTCGGCTAGTTGTCCGTTATTCCTGGTTTATCTCTTTCAATGCATTTGCCTCGCTCGGATTTCTTCATGAATTCATGTTCGTTGTCACGGACTTAAGCGAGATAGAGAGGCAGTAAGTAGCTTAAGCCTTTGATGAGTCCGAAGTTGCATGGCGTAGTTTGTTGTTCAGATGGTCCGTCGCTTCTGAATTATCTTGTTCAGTTGATAGTAGCACGATCATGTAGCAAAATCGTGCGAGTATCCATCAAGCTATTTGAGTAAATGAGGAATGGAAGATGCTTGGGGCTGTGAATAAAGATTGCTTGGTTGGCACTCCAATTCTCTTTGGAGCTTTATTCTTGAATCAATATAGGCACGACTGCATAGATGAATTAGACCGGAATCTAAAATTTTAAGCTAAGAATTTTTGACGTTCAACATTTTTTTAAAAACTTTTAGAGAGGGCGAAGCTAAGAGTTTTGTTATTCAGACAGAGAAAACTTGGTAGACGGATAAAACCTTCATTCCTATCAATGTCTGTTCTAACCATCACTTGAATCTATAATCCGAAGTCTTGATTGGTCCAATTTTTATAGTCAAAGCTTTTAGGAAGCTACAAGTCTGTGCCATGCCAACAGTTGTAGCACCCGTACTTGTATTAGGAGTGGTAGCTGGCGATGCTTGTTTAGATTGCTCGAACAGCTTTCGCATAGGTCCAGTTGCTCCTTTAAGAAGTTTCCATTTTGGATGTTTGAGTTTTCTTCAGCTTGTGTATCAGTGGCATGGTTTGCTTGGCCCTCCTATATGGAGGCTCAGAAGGCTTTCAAGCCTATTTCCGATCAATTTACCTAGCCAGTCTCTTCATACCATCTTCATACCATGTCCACATCTGGCCTTTTCTTTCTTGGTCCATTGTAGAAGAAGAACTTTTACATGTTAGAGCAGAGCTTTTAGCGTTCACCTGATTAGATGTTCCAGGCAAGTTTGTATCTGTCTCAGTAGTGATGTCTCTAATGGTAGGTCTTAGTGGTAGGAGTTTTCACATTCCTCATGAGGAACCTGAAGATTCTCTTTTATTGATTATTTTCCTATACTTTTTTATGTAAGTGATACGTTCTCATTCATGTATTTCATATAAATCAAGTCTGCCATGCCACAGTAGTGTACAAGAAGACTGTAATGTCTAGTTAGGGACCGGTTAATCATCCTGTTGTAGGTTATGGAGAATGATTTTTTTAAAAAAAGAAACAACTTCTCATTGATGTAATGAAAAGGATTACATGTTTATTAGATACAAACTCTCACGAGGAGAGAAAAAGAAAAGATATGATCAGCAAATACAACCGAAAAGAAATGAACTTTCTAAACAACTTCGACCTACAAGCCTCTTTCAATTGCTGAGAAAACAAAAGATACTACAAAAGTACCAAATAAACGCAGACAATGACTACCAAACAACAAAAGACCATCAAAGATCAAATTGAAAACTCTTGAACAATGCACGAACTAAAAATTCGATGAAAGAAGCTTTTGATGAAGCAGCACCAAGAATCTTGAAAAGAAACCTTCTCCTAGTGCTCTAAAAAATTCCAACAGGAGAACGGAACAAAGCCCAACAAGTAATATTAAAACGACACCACAAAAACTTCAGAAACAACAAACACGAAACCAGTCACCCTTTATAAAGCAGCCCAAAAGAAAGTACTCTCATGATCTCTAGTACTCGAAGCATAAATCCAACTCTTATTGACAAACAAGTTGCCCCAGCTTCTTAGAACTTTACGAGAGGGGAAAGAGGGTGAAATTTCTTTGAGTTGTAAACCACAAGCCTTAATTAAATATGAAAACTTTTTAGGAACTGAGCAAGGAATTATAACTGGCGACAAAGGTTGAGAAGCCACAGTCAACTTATCTTGGTCATCTTCCTTAAATAGCGTCTCAAAAGCATCAGCAAATGAATCCACAAGATAAGTATCTTCAAACACTTTGTGTTTTCCAAGGTTGCAGAAAGTAATGTAAAGCAACTTAAATCATTCTCCATAACAAGAAACAAGGTTATGGAGAATGATTTCAATGTTGAAGGACTCTTTGTGTTTTCCTAAGGTTAGAGAAGGTTGTTTTGGTTACACCTATGATCTATATAGATGTTTTGTCGATCTTATATGTCATCAAGTTGACCAACCATACTATGACTGTATTATTCGCTGCTTACCATCCTTCGTAGTCAGTCTAACCATTGTAATTACTTTTCTCATTTAGTTTGTGAGTAGTGATGGGTATGCAGCACCTTCAGAAACCATCACAACCATGTGTATAGTATATTACTTGACTTGAATGTTTCTTTTTTTTCTTTTTGATAACCGAGAGTTGGAGATGTGCTCCCCTATACATGGGGCTCCTGCGCCTGCCCCAAGGCACTGGAGTTGATTGTAGTGAAGAATGGTTTTTGCTTGAGACCAATTATGTCAATTTGAGTTGCTTTACATTACTTTCTTCAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATGCTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTGTCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAACTTCCTTATGATTTTATTGGAGTCTAGTGAATATGCTATTCAATTTCTAAACTCATTTCATCTGATCTATTTTGTTTTTTACTGTTCCCTTGTTTGACGAGTTCTGACCAAAATAACCAGAACTTGGTGACTAGTTAATGAAAATATTATTACTATTCCACCAAGAATATTGAAAGACTGGCCAGACATGCAAAACCAAAATCCTAAATAAGGGATCTACGAAAAGGAATTACAAAGATTGGCTCCCAACATTGAGAACCATCCTAAACAAATGGACAACCAAAAACTCTCTGAAGCAAAAGCCTAAACGAAAGCATTGTAGTGAGCCAAGTTTCACACATCCTTCCATGACCTCTCTGTGACTCTGTCCCATAAAAGTCTTCATGTTTCTTTCCAACTAAATACTCCAAATAACAAAGAAATAATTTGCCAACCGAAGAACCTTCCTGTTGTTACAAAAGGGTGGATGAAAACTAATCTCCTCCACACATCAGTAAGCGTGTGATCAGAAATGAACAACATACTGCAGTTGCCTGAAAATTTTCTTCCGAATCTTCTCAGCAAACATGCTTCAAAGCTCTTTGGATGTGCCTAGATCCCAGCATTGAAGTCAAACCACCGAGGACAATTTTAAATAAATCCATGAGATTGATTCTCCCATGTACAAACGGTAAAGAGAACTTAGCAAAGAGTAGAATTTAACATTCTTCAAACACAAGACCTTCCCTAGCTTAGGAAAAATAAATAAATAAAACCCTTACATCCTAGTGATTAAAAGATAAATACGACACCCTGCTTGATGTTAAGCTCTGTCAAATAAAGTTTTCTTGGAAGGGAAGTTAATGGAACCAAACTGCCCAAAAGAAAAAGAGAAACCAACTACGGAAATTTTCTTAATTGAAGACAGATTATAGAGCTGCGAAATAGACTTACCCCCCCCAAAAAAAAAAAAAATAATAATATATGCCAATAGATTTCCAGTGCTTCCTAAAAGTAAATTGTATGGTCTGATAGAGATCTTGTGCCACAACATATCGGGTTTTGATTAACAGAGCAATATTTGATAAAGCTAGATTTTCAAACCACCCTCTTTTCAACCTTTTGAACAACTCCCCCAACAAGACAAGGACCCAAAAAACGAAGTCTCATAAGTTTAATGAACATTGGTTCGAGCTTTGAAGGTTTTAATAAAGAGGAATTCCACTCAAAATCAACTAGATTGGTGTAAGTCGGCACCTCTGGAGAGAGCTTCTTCCATAACCTGAGGGGGTTTACCTCTTTCTAATACCTCTTCTAGTCCCAAATTTTAGGCTCGAGTGTATCGTCAATTAGGGTAGAGATATTAAATGAATTCATCTGAGGCTCAACAGAGAGCACGCTGAACCAACCACTTCTGTTAGACCGTTGATATAATGTCAAAATAAGGGAAGAAGAATTCTCTTCCTGAAAAAGGGCATCCTTTACCACCCCATGCCAAGAGTGGAAAGCAATCTATCAACCAAGCAACAATTCCAAACTCCCAGAGTAACTCAGCAGAACCAAAGTTGTCTTTCTCACCCACAAACTCCCTGCGTCCGAAAAGCTCAATTAGAAAGACTTGCTTTCTAGTGGAAAGCACCACCAAACATGAAGGCAAAGATAATCAAAGAAGAAAGTGCCGGATTCCTTTCTCCCATTAAAAAAAAAATCACTAGTAATTTTTTGAAATGTGTAGGTGTAACTTTGACACGCCAAAGCCTCATAATTGGAACCAACAATACCATTAAATCTTAGCAAGAAAGAGTCGGTTGTCGAGTATTCAGTCAGTAGAAAACACCGACAAATCTGAGAGTTAGGTTCTTTTTATATAGGAAAATCTCATTGTGAGACTTAACGTAGAATTGTGCAGTATTTGAGTTCTCCTACATACACTGGAACTGTAGTCTATTTTCCAAACAAAAACCAAGGAAAACTGGAAAGTTCATTTCTAATTACATGCTGGAACTAACATAATAAACTTCATCGTGCATTTATGTTTTATGAGCCATCCATTGATTGGTTCTTAATATTATCGATAGTATTGCCATAAGGTCACCTAGTTAAGTTTAAAAGGGAGATTAGTCTCTCTATCTATTGAAACACCATCAAACTAAAAGCTTTAGTTCATGGGTTATGATAAATTTAATTATATCAATGCTCTAACATTCTTCCTCACTTGTATACTTGCAAATTTATAGAAGGCCTAACATGTGGAAATCAATATTAATTAAGGAGGAAATAACATTACAAAGATTCAAAAATATGACTTCTTTCTCTAATACCATGTTAGATCATCAATCAACCCAAAAACTTAAACAAAATTATATCAATGCGCTAACAGTCTCATCGATTATATTTAGTTTTCTTTCATTCCTATCATTACAACAACTACATATTTCAGTTTATATATTGTAGTTTGAATTAATTATATTGGGTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCATTGATCGTCATTACTGTTTCGTTCTTTTTTGCTTTATACTTTGTAAGTTTCCTTTTGTCAGTTACTACTAATATTACAGATCAGGTGCTGGACTTTGCAAAACCGTAAATGGAAACTAACAATTGCTGTGTAATACTTACTGCAGTTTTTTGGACCATCTTTTGTTCATGATGCCAGCAAAACTCCAATATCTCCTCCACCGTACGTTGATCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCGCGTAAATTGA ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCCTTCGATCTCTCAGCCGAATTTTGGCGCACAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACCAGGAGGTTTGTACTGCTTCATGGACGTCGGAGGAGTATGCGATATGGCTGCGTTTGTAGAAGGTTGAGTTTCCGTTGCTCTGCTCAGGATACTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATGCTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTGTCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCATTGATCGTCATTACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTTTTGGACCATCTTTTGTTCATGATGCCAGCAAAACTCCAATATCTCCTCCACCGTACGTTGATCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCGCGTAAATTGA ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCCTTCGATCTCTCAGCCGAATTTTGGCGCACAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACCAGGAGGTTTGTACTGCTTCATGGACGTCGGAGGAGTATGCGATATGGCTGCGTTTGTAGAAGGTTGAGTTTCCGTTGCTCTGCTCAGGATACTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATGCTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTGTCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCATTGATCGTCATTACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTTTTGGACCATCTTTTGTTCATGATGCCAGCAAAACTCCAATATCTCCTCCACCGTACGTTGATCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCGCGTAAATTGA MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFRCSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFALYFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN Homology
BLAST of HG10019203.1 vs. NCBI nr
Match: XP_022984914.1 (uncharacterized protein LOC111483048 [Cucurbita maxima]) HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108 Identity = 205/222 (92.34%), Postives = 215/222 (96.85%), Query Frame = 0
BLAST of HG10019203.1 vs. NCBI nr
Match: XP_038905067.1 (uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida]) HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108 Identity = 206/222 (92.79%), Postives = 213/222 (95.95%), Query Frame = 0
BLAST of HG10019203.1 vs. NCBI nr
Match: KAG6576903.1 (hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 402.1 bits (1032), Expect = 3.0e-108 Identity = 204/222 (91.89%), Postives = 214/222 (96.40%), Query Frame = 0
BLAST of HG10019203.1 vs. NCBI nr
Match: XP_023552655.1 (uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 401.4 bits (1030), Expect = 5.2e-108 Identity = 204/222 (91.89%), Postives = 214/222 (96.40%), Query Frame = 0
BLAST of HG10019203.1 vs. NCBI nr
Match: XP_022922737.1 (uncharacterized protein LOC111430640 [Cucurbita moschata]) HSP 1 Score: 401.0 bits (1029), Expect = 6.8e-108 Identity = 203/222 (91.44%), Postives = 214/222 (96.40%), Query Frame = 0
BLAST of HG10019203.1 vs. ExPASy TrEMBL
Match: A0A6J1JBV1 (uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048 PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 5.1e-109 Identity = 205/222 (92.34%), Postives = 215/222 (96.85%), Query Frame = 0
BLAST of HG10019203.1 vs. ExPASy TrEMBL
Match: A0A6J1E457 (uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC111430640 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108 Identity = 203/222 (91.44%), Postives = 214/222 (96.40%), Query Frame = 0
BLAST of HG10019203.1 vs. ExPASy TrEMBL
Match: A0A6J1D5D9 (uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017763 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 8.4e-104 Identity = 198/222 (89.19%), Postives = 209/222 (94.14%), Query Frame = 0
BLAST of HG10019203.1 vs. ExPASy TrEMBL
Match: A0A1S3BY38 (uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 3.3e-100 Identity = 194/222 (87.39%), Postives = 205/222 (92.34%), Query Frame = 0
BLAST of HG10019203.1 vs. ExPASy TrEMBL
Match: A0A6J1JUF8 (uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 3.2e-95 Identity = 186/222 (83.78%), Postives = 200/222 (90.09%), Query Frame = 0
BLAST of HG10019203.1 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 197.2 bits (500), Expect = 1.4e-50 Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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