HG10019203 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10019203
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTubulin alpha chain
LocationChr04: 18630194 .. 18636183 (+)
RNA-Seq ExpressionHG10019203
SyntenyHG10019203
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCCTTCGATCTCTCAGCCGAATTTTGGCGCACAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACCAGGAGGTTTGTACTGCTTCATGGACGTCGGAGGAGTATGCGATATGGCTGCGTTTGTAGAAGGTTGAGTTTCCGTTGCTCTGCTCAGGATACTGATAAGGAAAGCAATGGTAAGTTTTAACTGCTTTGCTTCTGCTTTTGCTTCTAGCGTTCTTCTTTTTCTTATGTGTTTTTCTTGTTCAGTGCATTTGCTTTGCTTGTATTTTCTTGGTGATTGAATGTTCGTTGTCGTAGACTTCGTTTTACTTATATTGAAAGCGAGAGATAAAGAGGTTACTAATTAACTGGCTTAGATGAGGCAATGGTTACTGATGTGGTTTTGTTCGGGTGGTCTGTCGTTCTCAATCCTGAACTATCTTGCGTTGTAGACTACCATGCGAGCATTCATTCGGCTAGTTGTCCGTTATTCCTGGTTTATCTCTTTCAATGCATTTGCCTCGCTCGGATTTCTTCATGAATTCATGTTCGTTGTCACGGACTTAAGCGAGATAGAGAGGCAGTAAGTAGCTTAAGCCTTTGATGAGTCCGAAGTTGCATGGCGTAGTTTGTTGTTCAGATGGTCCGTCGCTTCTGAATTATCTTGTTCAGTTGATAGTAGCACGATCATGTAGCAAAATCGTGCGAGTATCCATCAAGCTATTTGAGTAAATGAGGAATGGAAGATGCTTGGGGCTGTGAATAAAGATTGCTTGGTTGGCACTCCAATTCTCTTTGGAGCTTTATTCTTGAATCAATATAGGCACGACTGCATAGATGAATTAGACCGGAATCTAAAATTTTAAGCTAAGAATTTTTGACGTTCAACATTTTTTTAAAAACTTTTAGAGAGGGCGAAGCTAAGAGTTTTGTTATTCAGACAGAGAAAACTTGGTAGACGGATAAAACCTTCATTCCTATCAATGTCTGTTCTAACCATCACTTGAATCTATAATCCGAAGTCTTGATTGGTCCAATTTTTATAGTCAAAGCTTTTAGGAAGCTACAAGTCTGTGCCATGCCAACAGTTGTAGCACCCGTACTTGTATTAGGAGTGGTAGCTGGCGATGCTTGTTTAGATTGCTCGAACAGCTTTCGCATAGGTCCAGTTGCTCCTTTAAGAAGTTTCCATTTTGGATGTTTGAGTTTTCTTCAGCTTGTGTATCAGTGGCATGGTTTGCTTGGCCCTCCTATATGGAGGCTCAGAAGGCTTTCAAGCCTATTTCCGATCAATTTACCTAGCCAGTCTCTTCATACCATCTTCATACCATGTCCACATCTGGCCTTTTCTTTCTTGGTCCATTGTAGAAGAAGAACTTTTACATGTTAGAGCAGAGCTTTTAGCGTTCACCTGATTAGATGTTCCAGGCAAGTTTGTATCTGTCTCAGTAGTGATGTCTCTAATGGTAGGTCTTAGTGGTAGGAGTTTTCACATTCCTCATGAGGAACCTGAAGATTCTCTTTTATTGATTATTTTCCTATACTTTTTTATGTAAGTGATACGTTCTCATTCATGTATTTCATATAAATCAAGTCTGCCATGCCACAGTAGTGTACAAGAAGACTGTAATGTCTAGTTAGGGACCGGTTAATCATCCTGTTGTAGGTTATGGAGAATGATTTTTTTAAAAAAAGAAACAACTTCTCATTGATGTAATGAAAAGGATTACATGTTTATTAGATACAAACTCTCACGAGGAGAGAAAAAGAAAAGATATGATCAGCAAATACAACCGAAAAGAAATGAACTTTCTAAACAACTTCGACCTACAAGCCTCTTTCAATTGCTGAGAAAACAAAAGATACTACAAAAGTACCAAATAAACGCAGACAATGACTACCAAACAACAAAAGACCATCAAAGATCAAATTGAAAACTCTTGAACAATGCACGAACTAAAAATTCGATGAAAGAAGCTTTTGATGAAGCAGCACCAAGAATCTTGAAAAGAAACCTTCTCCTAGTGCTCTAAAAAATTCCAACAGGAGAACGGAACAAAGCCCAACAAGTAATATTAAAACGACACCACAAAAACTTCAGAAACAACAAACACGAAACCAGTCACCCTTTATAAAGCAGCCCAAAAGAAAGTACTCTCATGATCTCTAGTACTCGAAGCATAAATCCAACTCTTATTGACAAACAAGTTGCCCCAGCTTCTTAGAACTTTACGAGAGGGGAAAGAGGGTGAAATTTCTTTGAGTTGTAAACCACAAGCCTTAATTAAATATGAAAACTTTTTAGGAACTGAGCAAGGAATTATAACTGGCGACAAAGGTTGAGAAGCCACAGTCAACTTATCTTGGTCATCTTCCTTAAATAGCGTCTCAAAAGCATCAGCAAATGAATCCACAAGATAAGTATCTTCAAACACTTTGTGTTTTCCAAGGTTGCAGAAAGTAATGTAAAGCAACTTAAATCATTCTCCATAACAAGAAACAAGGTTATGGAGAATGATTTCAATGTTGAAGGACTCTTTGTGTTTTCCTAAGGTTAGAGAAGGTTGTTTTGGTTACACCTATGATCTATATAGATGTTTTGTCGATCTTATATGTCATCAAGTTGACCAACCATACTATGACTGTATTATTCGCTGCTTACCATCCTTCGTAGTCAGTCTAACCATTGTAATTACTTTTCTCATTTAGTTTGTGAGTAGTGATGGGTATGCAGCACCTTCAGAAACCATCACAACCATGTGTATAGTATATTACTTGACTTGAATGTTTCTTTTTTTTCTTTTTGATAACCGAGAGTTGGAGATGTGCTCCCCTATACATGGGGCTCCTGCGCCTGCCCCAAGGCACTGGAGTTGATTGTAGTGAAGAATGGTTTTTGCTTGAGACCAATTATGTCAATTTGAGTTGCTTTACATTACTTTCTTCAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATGCTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTGTCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAACTTCCTTATGATTTTATTGGAGTCTAGTGAATATGCTATTCAATTTCTAAACTCATTTCATCTGATCTATTTTGTTTTTTACTGTTCCCTTGTTTGACGAGTTCTGACCAAAATAACCAGAACTTGGTGACTAGTTAATGAAAATATTATTACTATTCCACCAAGAATATTGAAAGACTGGCCAGACATGCAAAACCAAAATCCTAAATAAGGGATCTACGAAAAGGAATTACAAAGATTGGCTCCCAACATTGAGAACCATCCTAAACAAATGGACAACCAAAAACTCTCTGAAGCAAAAGCCTAAACGAAAGCATTGTAGTGAGCCAAGTTTCACACATCCTTCCATGACCTCTCTGTGACTCTGTCCCATAAAAGTCTTCATGTTTCTTTCCAACTAAATACTCCAAATAACAAAGAAATAATTTGCCAACCGAAGAACCTTCCTGTTGTTACAAAAGGGTGGATGAAAACTAATCTCCTCCACACATCAGTAAGCGTGTGATCAGAAATGAACAACATACTGCAGTTGCCTGAAAATTTTCTTCCGAATCTTCTCAGCAAACATGCTTCAAAGCTCTTTGGATGTGCCTAGATCCCAGCATTGAAGTCAAACCACCGAGGACAATTTTAAATAAATCCATGAGATTGATTCTCCCATGTACAAACGGTAAAGAGAACTTAGCAAAGAGTAGAATTTAACATTCTTCAAACACAAGACCTTCCCTAGCTTAGGAAAAATAAATAAATAAAACCCTTACATCCTAGTGATTAAAAGATAAATACGACACCCTGCTTGATGTTAAGCTCTGTCAAATAAAGTTTTCTTGGAAGGGAAGTTAATGGAACCAAACTGCCCAAAAGAAAAAGAGAAACCAACTACGGAAATTTTCTTAATTGAAGACAGATTATAGAGCTGCGAAATAGACTTACCCCCCCCAAAAAAAAAAAAAATAATAATATATGCCAATAGATTTCCAGTGCTTCCTAAAAGTAAATTGTATGGTCTGATAGAGATCTTGTGCCACAACATATCGGGTTTTGATTAACAGAGCAATATTTGATAAAGCTAGATTTTCAAACCACCCTCTTTTCAACCTTTTGAACAACTCCCCCAACAAGACAAGGACCCAAAAAACGAAGTCTCATAAGTTTAATGAACATTGGTTCGAGCTTTGAAGGTTTTAATAAAGAGGAATTCCACTCAAAATCAACTAGATTGGTGTAAGTCGGCACCTCTGGAGAGAGCTTCTTCCATAACCTGAGGGGGTTTACCTCTTTCTAATACCTCTTCTAGTCCCAAATTTTAGGCTCGAGTGTATCGTCAATTAGGGTAGAGATATTAAATGAATTCATCTGAGGCTCAACAGAGAGCACGCTGAACCAACCACTTCTGTTAGACCGTTGATATAATGTCAAAATAAGGGAAGAAGAATTCTCTTCCTGAAAAAGGGCATCCTTTACCACCCCATGCCAAGAGTGGAAAGCAATCTATCAACCAAGCAACAATTCCAAACTCCCAGAGTAACTCAGCAGAACCAAAGTTGTCTTTCTCACCCACAAACTCCCTGCGTCCGAAAAGCTCAATTAGAAAGACTTGCTTTCTAGTGGAAAGCACCACCAAACATGAAGGCAAAGATAATCAAAGAAGAAAGTGCCGGATTCCTTTCTCCCATTAAAAAAAAAATCACTAGTAATTTTTTGAAATGTGTAGGTGTAACTTTGACACGCCAAAGCCTCATAATTGGAACCAACAATACCATTAAATCTTAGCAAGAAAGAGTCGGTTGTCGAGTATTCAGTCAGTAGAAAACACCGACAAATCTGAGAGTTAGGTTCTTTTTATATAGGAAAATCTCATTGTGAGACTTAACGTAGAATTGTGCAGTATTTGAGTTCTCCTACATACACTGGAACTGTAGTCTATTTTCCAAACAAAAACCAAGGAAAACTGGAAAGTTCATTTCTAATTACATGCTGGAACTAACATAATAAACTTCATCGTGCATTTATGTTTTATGAGCCATCCATTGATTGGTTCTTAATATTATCGATAGTATTGCCATAAGGTCACCTAGTTAAGTTTAAAAGGGAGATTAGTCTCTCTATCTATTGAAACACCATCAAACTAAAAGCTTTAGTTCATGGGTTATGATAAATTTAATTATATCAATGCTCTAACATTCTTCCTCACTTGTATACTTGCAAATTTATAGAAGGCCTAACATGTGGAAATCAATATTAATTAAGGAGGAAATAACATTACAAAGATTCAAAAATATGACTTCTTTCTCTAATACCATGTTAGATCATCAATCAACCCAAAAACTTAAACAAAATTATATCAATGCGCTAACAGTCTCATCGATTATATTTAGTTTTCTTTCATTCCTATCATTACAACAACTACATATTTCAGTTTATATATTGTAGTTTGAATTAATTATATTGGGTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCATTGATCGTCATTACTGTTTCGTTCTTTTTTGCTTTATACTTTGTAAGTTTCCTTTTGTCAGTTACTACTAATATTACAGATCAGGTGCTGGACTTTGCAAAACCGTAAATGGAAACTAACAATTGCTGTGTAATACTTACTGCAGTTTTTTGGACCATCTTTTGTTCATGATGCCAGCAAAACTCCAATATCTCCTCCACCGTACGTTGATCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCGCGTAAATTGA

mRNA sequence

ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCCTTCGATCTCTCAGCCGAATTTTGGCGCACAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACCAGGAGGTTTGTACTGCTTCATGGACGTCGGAGGAGTATGCGATATGGCTGCGTTTGTAGAAGGTTGAGTTTCCGTTGCTCTGCTCAGGATACTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATGCTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTGTCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCATTGATCGTCATTACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTTTTGGACCATCTTTTGTTCATGATGCCAGCAAAACTCCAATATCTCCTCCACCGTACGTTGATCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCGCGTAAATTGA

Coding sequence (CDS)

ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCCTTCGATCTCTCAGCCGAATTTTGGCGCACAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACCAGGAGGTTTGTACTGCTTCATGGACGTCGGAGGAGTATGCGATATGGCTGCGTTTGTAGAAGGTTGAGTTTCCGTTGCTCTGCTCAGGATACTGATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATGCTAACAACAGTGACTTTGGACTTGGTGGCGAGATGACTGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTGTCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCATTGATCGTCATTACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTTTTGGACCATCTTTTGTTCATGATGCCAGCAAAACTCCAATATCTCCTCCACCGTACGTTGATCCATATGCTCTTTTAGAGGACGAGAGAATTTCACAAATAGCTCCTCGCGTAAATTGA

Protein sequence

MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFRCSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFALYFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN
Homology
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BLAST of HG10019203 vs. NCBI nr
Match: XP_022984914.1 (uncharacterized protein LOC111483048 [Cucurbita maxima])

HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108
Identity = 205/222 (92.34%), Postives = 215/222 (96.85%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFSELDSTRRFVLLHGRRRS+RYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+AQD+DKESNGEEPPESLFMKELKKRGITPTSLLED +N+DFGLGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFF GPSFVHD +KTPISPPPYVDPYALLEDERISQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

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BLAST of HG10019203 vs. NCBI nr
Match: XP_038905067.1 (uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida])

HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108
Identity = 206/222 (92.79%), Postives = 213/222 (95.95%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MAALQILKSTVSPPSISQPNFG QSSRFFS+LDSTRRFVLLHGRRRS+RYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPPSISQPNFGVQSSRFFSDLDSTRRFVLLHGRRRSLRYGCVCRRLSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+AQD DK+SNGEEPPESLFMKELKKRGITPTSLLED NNSDFGLGGEMTGENRDFSRRS
Sbjct: 61  CAAQDADKDSNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+ITVSFFFAL
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFAL 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFFFG SFVHD S+T ISPP YVDPYALLE+ERISQ AP VN
Sbjct: 181 YFFFGASFVHDGSRTAISPPSYVDPYALLEEERISQRAPPVN 222

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BLAST of HG10019203 vs. NCBI nr
Match: KAG6576903.1 (hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402.1 bits (1032), Expect = 3.0e-108
Identity = 204/222 (91.89%), Postives = 214/222 (96.40%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFSELDSTRRF LLHGRRRS+RYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+AQD+DKESNGEEPPESLFMKELKKRGITPTSLLED +N+DFGLGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFF GPSFVHD +KTPISPPPYVDPYALLEDERISQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

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BLAST of HG10019203 vs. NCBI nr
Match: XP_023552655.1 (uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401.4 bits (1030), Expect = 5.2e-108
Identity = 204/222 (91.89%), Postives = 214/222 (96.40%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFF ELDSTRRFVLLHGRRRS+RYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFLELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+AQD+DKESNGEEPPESLFMKELKKRGITPTSLLED +N+DFGLGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFF GPSFVHD +KTPISPPPYVDPYALLEDERISQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

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BLAST of HG10019203 vs. NCBI nr
Match: XP_022922737.1 (uncharacterized protein LOC111430640 [Cucurbita moschata])

HSP 1 Score: 401.0 bits (1029), Expect = 6.8e-108
Identity = 203/222 (91.44%), Postives = 214/222 (96.40%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFSELDSTRRF LLHGRRRS+RYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+AQD+DKESNGEEPPESLFMKELKKRGITPTSLLED +N+DFGLGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFF GPSFVHD +KTPISPPPYVDPYALLEDER+SQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERMSQMAPRVN 222

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BLAST of HG10019203 vs. ExPASy TrEMBL
Match: A0A6J1JBV1 (uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.1e-109
Identity = 205/222 (92.34%), Postives = 215/222 (96.85%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFSELDSTRRFVLLHGRRRS+RYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+AQD+DKESNGEEPPESLFMKELKKRGITPTSLLED +N+DFGLGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFF GPSFVHD +KTPISPPPYVDPYALLEDERISQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

[Close]
BLAST of HG10019203 vs. ExPASy TrEMBL
Match: A0A6J1E457 (uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC111430640 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.3e-108
Identity = 203/222 (91.44%), Postives = 214/222 (96.40%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MA LQILKSTVSPPSISQP FG+QSSRFFSELDSTRRF LLHGRRRS+RYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+AQD+DKESNGEEPPESLFMKELKKRGITPTSLLED +N+DFGLGGEM GENRDFSRRS
Sbjct: 61  CAAQDSDKESNGEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV+TVSFFFAL
Sbjct: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFF GPSFVHD +KTPISPPPYVDPYALLEDER+SQ+APRVN
Sbjct: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERMSQMAPRVN 222

[Close]
BLAST of HG10019203 vs. ExPASy TrEMBL
Match: A0A6J1D5D9 (uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017763 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.4e-104
Identity = 198/222 (89.19%), Postives = 209/222 (94.14%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MAALQ+LKS VSP SISQPNFG +SSRF S+ DSTRRFV  HGRRRS+RYGCVCRRLSFR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+AQD DKESNGEEPPESLFMKELKKRG+TPTSLLED+N++DFGLGGEMTGE RDFS RS
Sbjct: 61  CAAQDADKESNGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTGEGRDFSSRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFFFGPSFVH+  +TPISPPPYVDPYALLEDERISQ APRVN
Sbjct: 181 YFFFGPSFVHN-GETPISPPPYVDPYALLEDERISQTAPRVN 221

[Close]
BLAST of HG10019203 vs. ExPASy TrEMBL
Match: A0A1S3BY38 (uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.3e-100
Identity = 194/222 (87.39%), Postives = 205/222 (92.34%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MA+LQILKST+S PSIS PNFG+QS+RFFS+ DS    +LLHGRRRS+R  CVCRR SFR
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+A+D DKESNGEEPPESLFMKELKKRGITPTSLLED NNSDFGLGGEMTGENRDFSRRS
Sbjct: 61  CAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+ITVSFFF L
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFFFG SF+HD  KTPISPPPYVDPYALLEDERISQIAP VN
Sbjct: 181 YFFFGSSFIHD-GKTPISPPPYVDPYALLEDERISQIAPPVN 217

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BLAST of HG10019203 vs. ExPASy TrEMBL
Match: A0A6J1JUF8 (uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.2e-95
Identity = 186/222 (83.78%), Postives = 200/222 (90.09%), Query Frame = 0 

Query: 1   MAALQILKSTVSPPSISQPNFGAQSSRFFSELDSTRRFVLLHGRRRSMRYGCVCRRLSFR 60
           MAALQILKSTVS  S SQ +FG QSSRFF+ELDS+RR V  HGRRRS+RYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSTLSFSQTSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CSAQDTDKESNGEEPPESLFMKELKKRGITPTSLLEDANNSDFGLGGEMTGENRDFSRRS 120
           C+AQD+ KESNGEEPPESLFMKELKKRGITPTSLLED  +++F LGGE TGEN DFS  S
Sbjct: 61  CAAQDSHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLT+GGTFFLGFWPLIVITV+FFFA 
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAF 180

Query: 181 YFFFGPSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
           YFFFG SFVHD ++TP SPPPYV PYA LEDERISQIAPRVN
Sbjct: 181 YFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 222

[Close]
BLAST of HG10019203 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-50
Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 0 

Query: 67  DKESNGEEPPESLFMKELKKRGITPTSLLEDAN-NSDFGLGGEMTGENRDFSRRSAVSTE 126
           D +S GEEPPESLFMKELK+RG+TPTSLL+D   + D    G+ TG +   S+ +A +  
Sbjct: 56  DNQSKGEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGNS---SKTTATTPA 115

Query: 127 VNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFALYFFFG 186
            +KSL NQRERS+ LNSEGLEGLIPRA++LLTIGGTFFLGFWPLIV+T+  F ALY +FG
Sbjct: 116 FDKSLLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFG 175

Query: 187 PSFVHDASKTPISPPPYVDPYALLEDERISQIAPRVN 223
             F+HD S+TP+SPPPY+DPYALLEDERIS + PR+N
Sbjct: 176 ADFIHDGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209

The following BLAST results are available for this feature:
BLAST of HG10019203 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022984914.11.0e-10892.34uncharacterized protein LOC111483048 [Cucurbita maxima][more]
XP_038905067.11.0e-10892.79uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida][more]
KAG6576903.13.0e-10891.89hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023552655.15.2e-10891.89uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo][more]
XP_022922737.16.8e-10891.44uncharacterized protein LOC111430640 [Cucurbita moschata][more]
BLAST of HG10019203 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10019203 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JBV15.1e-10992.34uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048... [more]
A0A6J1E4573.3e-10891.44uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC1114306... [more]
A0A6J1D5D98.4e-10489.19uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A1S3BY383.3e-10087.39uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=... [more]
A0A6J1JUF83.2e-9583.78uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of HG10019203 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50020.11.4e-5065.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..137
NoneNo IPR availablePANTHERPTHR35699F2J10.10 PROTEINcoord: 24..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10019203.1HG10019203.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane