Cucsat.G9609.T35 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGATTCATTCATCTCTATAGGGTGGGGAATGGGATGTTCGTGGAGCTCCAAAGCCCTAACCCTAACCCTAACCCTTCAATTTCTTCAATCCAATTCCCAAAATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACCACCATTTCTACTTCTACATTGCCTTCCCCTCTATTTCTACCGTTCAATTCCTCAAAAATCCATCTGCCCTTTATTCAGGATCTCCTACTCCCAACGGTCCAAAGCTCCAATTCCATGAAATAGACATCCAGCAGTACGGAGCCATTATCGGTTTCTTGAAATCACATGGGTTCGAGAATCCACAGATCGCCAAGTTGGTTTCCAGGCAACCTTCGATCCTTCAATCCAGAGTCGCCACTCTGAAACCTAAATTTGAGATCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGCTAATTCTGTCAAACCCTTCGGTTCTTCACAGGAGCTTAGATTCTCAGTTGAAACCATCATTTCGTATCATAAAGGAAATGCTTGTATCGGATGAAAAGGTAACTGCTGCTATTTTTCGTTGTACGTGGCTTCTAACTTATACTTCCAAGGGTACTATGCGATCTAACATTGATGTTTTGGTTAGTGAGGGAGTACCTTCTAGGAATATCGTGAAATTGATTGAATTGAACCCTAGAACTATTTTGCGAAAGGTTGATTTAATGATTCATGCAGTGGAAACAGTTAAAGAATCAGGGGTTGAACCAAAGGATGGTATGTTTCTTCATGCAGTTAGAGCAGTGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAAATTTCCACCTTACTTCACATGTTCAGAGGAGAAAATGAGGGACGTTGCAGATTTCTGTTCCAACACTGCAATGTTAGATCCAGGAACTCTAATATCTTACCCTGTGTTATTCAAGTATTCAGTCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATCAAAAAGATTGCTTCGGCATTTGTGAAAGGGGAAGGATATTTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGCTGCAGCCGAAACCAAATCTGTTGTATAGGATTGGAAAGCTTGAAGTTTAGATTTGAGCATCATGATCTTCAAAGGGGGAGAGAATTTTTGTGGTTATTGAGCCTTCTGTTTCAGCTAACATTGCTTCTTGAGCCTTTTCAGGTGGGAGAGTTGTGTTGTCTTTCCATCCAAATTAAGACAGGTAAATCTATTTGGTGTACATTTCTTCATAGACGTGTTAATCTTGAAATTGGAGGCCTTTTTGTTTTTCCCTTTCCTAATCTTTTACTCTTTGCTTGAACATTTGTAAGTTTGTAGACTAATTTAGAATCAAATGATATTGAAATAGAGGTGATTTTGTTCATTCATACTATGAGATGAGATGAGAGACATTAGACTTTTTGAATATTCTGAGTTGGACTCTTATTCTTTTGCTATTCCAAATAGATTTTCATATCTTGGGTAAATGACAAACATTGTCATGAAATTCATTTTTATTTAAACGGTTTGAAAATTTCAAACCACTAAAGCTTAATTATAAGGATCATCATAGGCAATATTCGTTAAACTTTCCCACCTCCGTTCGAGTTCTTTTTTTATTATATTTTGTAAATAGTTTGATGGTTGTGAAAATGTTTCCCGGTTATTTTTTCTTTCTTTTTATTCTTTTTATTGTTTTTTTTTCTTTTGGTAAATTCAAGGACTCGAGTCTTCAACTTTAGTGTCTTTATGTAATATGTATAAATAAAACTAATTAAGGTTTAATATTTGTAGGTAGCTTAGTGGTAACTGTGCTTGTCACATGTCAATAAAATTTTGGGATCTGGATTCGCCACTCTATATATATTTGAATGGTTCGATTGAACTTATTCTTAACTTTAGATTAGGGTAGGGAGTTTCGTCTATTAGCGTAAGTTCAATTCACGTAATTGAATATAGTATTGCCATACCATAATATTACATGTAACAACAAGATAAGTTTGATCTTACTTATTTTCTTTGTAGGTGAATGAAGACTTCCTATACTAACTTAAATATCCTAATGCAATAGGATTGGTACCGCATCGTGTGAGAATCTGTTTCACAAGTCAAGAAGAGAATAATCAAGACAAGACTCGCTAGGAAGGTCAAGCCTACAAGAACCTGTGGCAAACCCTAACTTCGGTGACATTCAAGCGCCAACGATATTCACAAAAGCAATGTCACGTATCCATACCCTATGATATTTTTGCAAAAATAAAAGAGTTCAAAAAAATATTTAAATGGATAAATTAGCATTTTTTATACCATTTAAAAGGTTTGTTATTTATATTATGTTTAGTTAGAAACACTTTTGTTATACTCAATGGTGCAAAAACTTGGTTTTTGAAAATATTGGTAGAGAAAACAATATATAGGTATATATGAACATTTTTCTATTGACGAGTACATCTACATGGTGCAAAGAGTACCATAAAATCGATATTGGATTTGCTTTCAGACTACTCCCAATTTACAATTGAGTAGACGTCGATAGGATACTATTGTGTTGTGGATGTTTTGTGAATGACGTCGTGGGCTGCTTGTTTTGCGAGAAATCTGTCATTTGCCAATTTATTTTATTGAGATGGACGTGGAAATGAAGAACATGAAGTTTGAGAGGAAATATTGGGATTTGAGGATGGAGAACTAGGTGAATTTTTTTTAGAGTATGAACATTTAAGGCAATTTTTCGTATTAACAATTAAAATAAAATTTTATCATTTATTCAAAGTAAACCTTTAAATTTGTAATTTTATTAGTCGGTCTCTCTCAGTTAATATTTTCTACTTTACCCTACTTTTGCCATTTGTTTATATTCTTACGTTATATAAATTTAGATGTATTTGTCATTTTTCTAAACAATGATATTAATTTTAGAATTAAACGATGAAAGTTATTTGTAAGTAAAATAAATAATGCATTTCCTAATAGGGATAATTAAAAAATATCTAATATCCATAACCATTCCTCCATTATTTGAAAGTAATTATTGAAATAAAATTATGTATCTATATAAATAATAAAAATAATATACGAACTTCAAAATTCCATATCAAAATTCAACTTTTTAAGCTTTTAAATTTTATTTTCTTAAGTTTTACTCAAGGAAGGAAATTCGTCTTTTCTTCGCACGAAAAATATAAATTCATCTTTTAACAAAAGATAAAAGAAAAGTTCTAATATATTCCTTTATTTTTATTATTTAAGCCAAAATATAATATTCTTTTTATTTTTAATTAGGTAAATAAACAAAATTTTTCTTTTTCTTTTTACATATATATTAAAAATAAAATTTATATTTATTCGCTCAAAACAAAATTTATTAACTACTTAGATTAAATAATATTTTTTAATACAAAAATTATAAACAAAATTTCATTTTAATATTTAATTTATTTGACTTATCTTTCAAAAACTATAATAATAATTTAAAAAACATTTTAAAATAAAGGGTGCGATTTTAGGCGATGGGCCAAACAACCCCAATTGGGGATAGATGTTCGCTTCGTTGAGCTCAAAACCCTAACCAAAACCCTTTCTTCCTTTTCTTCATTCCAAACCCCAATATGTCCAAAATTTCCTCCACACTTCTTCTACATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGGAGCCATCATCGGTTTCTTCAAATCTCATGGATTCGAGTATCCACAGATCTCCAATTTGATCTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTAATTTTATCAACCCCATGGGTGCTTAGCAAAAGCTTAGATTCCCAGTTGAAACCATCATTTTTTTTCATTAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTGTTATTTATCGTTTTCCAAGCCTTCTAATTAGTGATTGGCGGGGTAATTTTAAATCTAGCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAAAGAAGATGATTGCATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAATGATTGATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATAAAAAAGATTGGTCCGGTGCTTTTACGAGGGGAGAGAGAATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGTCGCAGCCGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATGTTCTTATAGTTTAAATTTGAGCATCATGATCTTCAAAAGGGGAGAGCATTTTTGTTGTTATTGAGCCTACTGTTCTGTTTCAAACAACACTACCTCTTGAGCTTTTCAAAATCTCTCTCTCTCTCTCTCTCTGTGTGTTTTCAGGTGGAGAGTTGTGTTGTTTTTGCATCCAAATCAAGGCAGTTAGGTACGTAAATCTATTTGATGTATATTTTGTTCATAGACATGTTAAACTTGAAATTGGAGGCCTTTCTGCTTCAACTTTTGTAAGTTTGTAGACTAATTTTTGAATCTAATGATCTTG ATGCTTGTATCGGATGAAAAGGTAACTGCTGCTATTTTTCGTTGTACGTGGCTTCTAACTTATACTTCCAAGGGTACTATGCGATCTAACATTGATGTTTTGGTTAGTGAGGGAGTACCTTCTAGGAATATCGTGAAATTGATTGAATTGAACCCTAGAACTATTTTGCGAAAGGTTGATTTAATGATTCATGCAGTGGAAACAGTTAAAGAATCAGGGGTTGAACCAAAGGATGGTATGTTTCTTCATGCAGTTAGAGCAGTGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATAAAAAAGATTGGTCCGGTGCTTTTACGAGGGGAGAGAGAATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGTCGCAGCCGAAACCAAAAGTGTTGTATAG MLVSDEKVTAAIFRCTWLLTYTSKGTMRSNIDVLVSEGVPSRNIVKLIELNPRTILRKVDLMIHAVETVKESGVEPKDGMFLHAVRAVLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMDIYRGNVAAETKSVV Homology
BLAST of Cucsat.G9609.T35 vs. NCBI nr
Match: XP_031742250.1 (uncharacterized protein LOC116404132 [Cucumis sativus] >XP_031742251.1 uncharacterized protein LOC116404132 [Cucumis sativus]) HSP 1 Score: 398 bits (1022), Expect = 8.34e-139 Identity = 202/227 (88.99%), Postives = 210/227 (92.51%), Query Frame = 0
BLAST of Cucsat.G9609.T35 vs. NCBI nr
Match: KAE8648644.1 (hypothetical protein Csa_008356 [Cucumis sativus]) HSP 1 Score: 398 bits (1022), Expect = 8.09e-137 Identity = 202/227 (88.99%), Postives = 210/227 (92.51%), Query Frame = 0
BLAST of Cucsat.G9609.T35 vs. NCBI nr
Match: XP_011655534.2 (transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KAE8648645.1 hypothetical protein Csa_007996 [Cucumis sativus]) HSP 1 Score: 361 bits (926), Expect = 5.58e-122 Identity = 188/228 (82.46%), Postives = 203/228 (89.04%), Query Frame = 0
BLAST of Cucsat.G9609.T35 vs. NCBI nr
Match: XP_031741760.1 (transcription termination factor MTERF9, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 347 bits (891), Expect = 2.23e-117 Identity = 175/227 (77.09%), Postives = 197/227 (86.78%), Query Frame = 0
BLAST of Cucsat.G9609.T35 vs. NCBI nr
Match: KAE8648669.1 (hypothetical protein Csa_007829 [Cucumis sativus]) HSP 1 Score: 347 bits (891), Expect = 1.11e-116 Identity = 175/227 (77.09%), Postives = 197/227 (86.78%), Query Frame = 0
BLAST of Cucsat.G9609.T35 vs. ExPASy TrEMBL
Match: A0A1S4DW22 (transcription termination factor MTERF5, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488866 PE=3 SV=1) HSP 1 Score: 340 bits (872), Expect = 1.86e-115 Identity = 168/227 (74.01%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Cucsat.G9609.T35 vs. ExPASy TrEMBL
Match: A0A1S3BEV9 (transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488866 PE=3 SV=1) HSP 1 Score: 340 bits (872), Expect = 4.11e-114 Identity = 168/227 (74.01%), Postives = 196/227 (86.34%), Query Frame = 0
BLAST of Cucsat.G9609.T35 vs. ExPASy TrEMBL
Match: A0A1S3BDZ4 (uncharacterized protein LOC103488851 OS=Cucumis melo OX=3656 GN=LOC103488851 PE=3 SV=1) HSP 1 Score: 331 bits (849), Expect = 9.07e-113 Identity = 168/226 (74.34%), Postives = 193/226 (85.40%), Query Frame = 0
BLAST of Cucsat.G9609.T35 vs. ExPASy TrEMBL
Match: A0A1S3BH03 (uncharacterized protein LOC103489540 OS=Cucumis melo OX=3656 GN=LOC103489540 PE=3 SV=1) HSP 1 Score: 329 bits (844), Expect = 5.61e-112 Identity = 171/228 (75.00%), Postives = 191/228 (83.77%), Query Frame = 0
BLAST of Cucsat.G9609.T35 vs. ExPASy TrEMBL
Match: A0A5A7SU45 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002650 PE=3 SV=1) HSP 1 Score: 331 bits (849), Expect = 1.27e-110 Identity = 168/226 (74.34%), Postives = 193/226 (85.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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