Cucsat.G9609.T11 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G9609.T11
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Transcription termination factor MTERF5
Location	ctg1673: 3377334 .. 3386268 (-)
RNA-Seq Expression	Cucsat.G9609.T11
Synteny	Cucsat.G9609.T11

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTATAGGGTGGGGAATGGGATGTTCGTGGAGCTCCAAAGCCCTAACCCTAACCCTAACCCTTCAATTTCTTCAATCCAATTCCCAAAATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACCACCATTTCTACTTCTACATTGCCTTCCCCTCTATTTCTACCGTTCAATTCCTCAAAAATCCATCTGCCCTTTATTCAGGATCTCCTACTCCCAACGGTCCAAAGCTCCAATTCCATGAAATAGACATCCAGCAGTACGGAGCCATTATCGGTTTCTTGAAATCACATGGGTTCGAGAATCCACAGATCGCCAAGTTGGTTTCCAGGCAACCTTCGATCCTTCAATCCAGAGTCGCCACTCTGAAACCTAAATTTGAGATCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGCTAATTCTGTCAAACCCTTCGGTTCTTCACAGGAGCTTAGATTCTCAGTTGAAACCATCATTTCGTATCATAAAGGAAATGCTTGTATCGGATGAAAAGGTAACTGCTGCTATTTTTCGTTGTACGTGGCTTCTAACTTATACTTCCAAGGGTACTATGCGATCTAACATTGATGTTTTGGTTAGTGAGGGAGTACCTTCTAGGAATATCGTGAAATTGATTGAATTGAACCCTAGAACTATTTTGCGAAAGGTTGATTTAATGATTCATGCAGTGGAAACAGTTAAAGAATCAGGGGTTGAACCAAAGGATGGTATGTTTCTTCATGCAGTTAGAGCAGTGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTACAGCATTTAAGAAATTTCCACCTTACTTCACATGTTCAGAGGAGAAAATGAGGGACGTTGCAGATTTCTGTTCCAACACTGCAATGTTAGATCCAGGAACTCTAATATCTTACCCTGTGTTATTCAAGTATTCAGTCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATCAAAAAGATTGCTTCGGCATTTGTGAAAGGGGAAGGATATTTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGCTGCAGCCGAAACCAAATCTGTTGTATAGGATTGGAAAGCTTGAAGTTTAGATTTGAGCATCATGATCTTCAAAGGGGGAGAGAATTTTTGTGGTTATTGAGCCTTCTGTTTCAGCTAACATTGCTTCTTGAGCCTTTTCAGGTGGGAGAGTTGTGTTGTCTTTCCATCCAAATTAAGACAGGTAAATCTATTTGGTGTACATTTCTTCATAGACGTGTTAATCTTGAAATTGGAGGCCTTTTTGTTTTTCCCTTTCCTAATCTTTTACTCTTTGCTTGAACATTTGTAAGTTTGTAGACTAATTTAGAATCAAATGATATTGAAATAGAGGTGATTTTGTTCATTCATACTATGAGATGAGATGAGAGACATTAGACTTTTTGAATATTCTGAGTTGGACTCTTATTCTTTTGCTATTCCAAATAGATTTTCATATCTTGGGTAAATGACAAACATTGTCATGAAATTCATTTTTATTTAAACGGTTTGAAAATTTCAAACCACTAAAGCTTAATTATAAGGATCATCATAGGCAATATTCGTTAAACTTTCCCACCTCCGTTCGAGTTCTTTTTTTATTATATTTTGTAAATAGTTTGATGGTTGTGAAAATGTTTCCCGGTTATTTTTTCTTTCTTTTTATTCTTTTTATTGTTTTTTTTTCTTTTGGTAAATTCAAGGACTCGAGTCTTCAACTTTAGTGTCTTTATGTAATATGTATAAATAAAACTAATTAAGGTTTAATATTTGTAGGTAGCTTAGTGGTAACTGTGCTTGTCACATGTCAATAAAATTTTGGGATCTGGATTCGCCACTCTATATATATTTGAATGGTTCGATTGAACTTATTCTTAACTTTAGATTAGGGTAGGGAGTTTCGTCTATTAGCGTAAGTTCAATTCACGTAATTGAATATAGTATTGCCATACCATAATATTACATGTAACAACAAGATAAGTTTGATCTTACTTATTTTCTTTGTAGGTGAATGAAGACTTCCTATACTAACTTAAATATCCTAATGCAATAGGATTGGTACCGCATCGTGTGAGAATCTGTTTCACAAGTCAAGAAGAGAATAATCAAGACAAGACTCGCTAGGAAGGTCAAGCCTACAAGAACCTGTGGCAAACCCTAACTTCGGTGACATTCAAGCGCCAACGATATTCACAAAAGCAATGTCACGTATCCATACCCTATGATATTTTTGCAAAAATAAAAGAGTTCAAAAAAATATTTAAATGGATAAATTAGCATTTTTTATACCATTTAAAAGGTTTGTTATTTATATTATGTTTAGTTAGAAACACTTTTGTTATACTCAATGGTGCAAAAACTTGGTTTTTGAAAATATTGGTAGAGAAAACAATATATAGGTATATATGAACATTTTTCTATTGACGAGTACATCTACATGGTGCAAAGAGTACCATAAAATCGATATTGGATTTGCTTTCAGACTACTCCCAATTTACAATTGAGTAGACGTCGATAGGATACTATTGTGTTGTGGATGTTTTGTGAATGACGTCGTGGGCTGCTTGTTTTGCGAGAAATCTGTCATTTGCCAATTTATTTTATTGAGATGGACGTGGAAATGAAGAACATGAAGTTTGAGAGGAAATATTGGGATTTGAGGATGGAGAACTAGGTGAATTTTTTTTAGAGTATGAACATTTAAGGCAATTTTTCGTATTAACAATTAAAATAAAATTTTATCATTTATTCAAAGTAAACCTTTAAATTTGTAATTTTATTAGTCGGTCTCTCTCAGTTAATATTTTCTACTTTACCCTACTTTTGCCATTTGTTTATATTCTTACGTTATATAAATTTAGATGTATTTGTCATTTTTCTAAACAATGATATTAATTTTAGAATTAAACGATGAAAGTTATTTGTAAGTAAAATAAATAATGCATTTCCTAATAGGGATAATTAAAAAATATCTAATATCCATAACCATTCCTCCATTATTTGAAAGTAATTATTGAAATAAAATTATGTATCTATATAAATAATAAAAATAATATACGAACTTCAAAATTCCATATCAAAATTCAACTTTTTAAGCTTTTAAATTTTATTTTCTTAAGTTTTACTCAAGGAAGGAAATTCGTCTTTTCTTCGCACGAAAAATATAAATTCATCTTTTAACAAAAGATAAAAGAAAAGTTCTAATATATTCCTTTATTTTTATTATTTAAGCCAAAATATAATATTCTTTTTATTTTTAATTAGGTAAATAAACAAAATTTTTCTTTTTCTTTTTACATATATATTAAAAATAAAATTTATATTTATTCGCTCAAAACAAAATTTATTAACTACTTAGATTAAATAATATTTTTTAATACAAAAATTATAAACAAAATTTCATTTTAATATTTAATTTATTTGACTTATCTTTCAAAAACTATAATAATAATTTAAAAAACATTTTAAAATAAAGGGTGCGATTTTAGGCGATGGGCCAAACAACCCCAATTGGGGATAGATGTTCGCTTCGTTGAGCTCAAAACCCTAACCAAAACCCTTTCTTCCTTTTCTTCATTCCAAACCCCAATATGTCCAAAATTTCCTCCACACTTCTTCTACATTTCATCCATAAACGTTTTCTCAATACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGGAGCCATCATCGGTTTCTTCAAATCTCATGGATTCGAGTATCCACAGATCTCCAATTTGATCTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTAATTTTATCAACCCCATGGGTGCTTAGCAAAAGCTTAGATTCCCAGTTGAAACCATCATTTTTTTTCATTAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTGTTATTTATCGTTTTCCAAGCCTTCTAATTAGTGATTGGCGGGGTAATTTTAAATCTAGCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAAAGAAGATGATTGCATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAATGATTGATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATAAAAAAGATTGGTCCGGTGCTTTTACGAGGGGAGAGAGAATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGTCGCAGCCGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATGTTCTTATAGTTTAAATTTGAGCATCATGATCTTCAAAAGGGGAGAGCATTTTTGTTGTTATTGAGCCTACTGTTCTGTTTCAAACAACACTACCTCTTGAGCTTTTCAAAATCTCTCTCTCTCTCTCTCTCTGTGTGTTTTCAGGTGGAGAGTTGTGTTGTTTTTGCATCCAAATCAAGGCAGTTAGGTACGTAAATCTATTTGATGTATATTTTGTTCATAGACATGTTAAACTTGAAATTGGAGGCCTTTCTGCTTCAACTTTTGTAAGTTTGTAGACTAATTTTTGAATCTAATGATCTTGAAATAGGGGTAGCTTTTTTTCATTCCTATTGTGAGATGACAGACATTAGAGTTATAGATAAACTTCACACACTTTCAACTATACCCTCCCGCTCTCAACATACTACAAAATCTCAAAACCTCATTCTTCCATTTATGTGTTCTCTCCCTGTAATTATCCTCTTCATCGTTCCAATCCCAACAATTAATATGTTTACAGCACTTCCGACCACCGTAATCCTTTTTCTGACCTCGAAATCTTATTCCTAACCCAAAAATACCAACCAAACTACCTAACTCTCCGGCCACATTCTGCCATATAATTTCTTAATTTCACCTCACAAATCTTAAAAAATCCAAGCCCTTCCATCTTTCAAATTGGCTGCCAAAATTTTAAATAAGCCAATCCAGGTTTCTTCACAGTGAGGGAAAAATTCCAACTTTCTTTTGATATAAACTCTCAAGATTTTCATTTGTTGCAGCAAGTTTCTAGAGAGGACCAAATAAAGAAAAGGTTTAAAATTAGATAAGTTTCCTTTTTCTAAAACAATTTTTAAGTTTAGTTTTGAAAATTGGAAATATGGAAACTTTTGAATTAAACCAATGGTTAAAACAATCATTTGCAAAATTAAAAGTTTAATTAACGATCAAAAGGGTGTAGATGGTCATCAAACAAGATCAACAACATTGATTACATGTAACAAGAAAGAACGATAGAAAAAACATAATTGAAAAATGGAGAGAAAACAAATATAAATAAATTAACTAAAAGGGAAAATTGAAATGATTATAACCAAATATGTAATTGATTCTTAGTTTAATTTTATAATCACCACTTTTCTTCATACATTTTAAATTTTACCTTAATTATATTATTTAACCTATATTACATATAGTTATTTGAAAAGGGAAAACAAACAAACAAATAAATCCTAATTAATAAAAACTAATTTCACTTTTCCTTTTTTATTAACAAAATTTGAGTAAAATGTGAGTTCTTATTTCATCCTTCCTTACCCTTTTCTTTTTTAAGGAAAAAAGTAAATTAAACATATATGTATATATATTCATTAATTTAAAAGTAGAATATGATTTAAACATTCTAAGATGATCAATAGTTAAAACCAGCCATTCTTGCACATGGTGACATTTCTTGTTAAAGGGAAAACCAAATTAGACAAAAACATTTTTAAAAAGATAACTTATGATATATATATATTTTTTGCATATCGGTAAAATTAGTGATATCATAGGACTATTAGACACCAATTAAATGACTATTGTTATTGACTCTTAAATTTTACTTTTAAAATTTAGAAAATGTAGTGACATGAATTTTATTATCATAATTTTTTTTTTTTTTTTTACTATTTTTGTAAAAATCCCAATATAATGTCAGAATCTAAAGAACAAGATACACAGGAAGAAAAGCATAGCAATAAGTGTAATTATTCCTTATAGTTTACACAGCGTAACGAGAGACTGTTTAGAGGTTCTAAAGCCAAGTTCTCATGTTGCATACTATAGTCGATAAAAGTCTCATTGGTAATCCTAAAATGGCTCAAGAAAGTTATCAAGGGAAGAGAATACAATTTCTTTTTCACACTTTAGATAAAAGTTTAATTTATTATTAAGGATAGTTGCAAATTTAGCAATTAGATTCAAAACAATTAACATTATAGCAACATTTTAAAAATTTTGCAAATATAGCAAAATTTGTCAAATTCTACTCATGATAAACTATGTTGCATTATTATTCCGGGTCAATTTCAATTTTGGTTATTATTAATAGATTTTTTTTTTTTTTTTTTTGTTTGGGTGTGGTTTAGGTGAAGGCTAGGTGACTAAGTGTGACGACGAGAAATGTGAAAGAATTGAGAGAACAACAGAATACACAAAAGGAAGAGTCGGGCGATGGGCCAAACAGACCCAGTGGCTTTTCTGCTCTCTGTGGGGATCTTCGCTTCGTTGAGCTCAAAACCCTAACCAAAACCCACCCTTCATTTTCTTCATTTTCTTCATTTTCTTCGTTCCAAATCACAATATGTCCAAATTTTCCTCCACATCTCTTCTACATTTCATCCATAAACGTTTTCTTAATACCATTTCTACTTCTACGTTGCCTTCACCCTCTTTTTCTACCATCCAGTTCCTCACTAATTCATGCGGCCTTTCTTCAGGATCTCCTACCTCCGGCGGTCGAAAGCTCCAATTCGATGAAAAACACATCCACCAGTACGAAGCCATTATCGGTTTCTTGAAATCTCATGGATTCCAGTATCCACAGATCGCCAAATTGATCTCGAGGCGACCTTCGATCCTTCAATCCAAAGTATCCAACAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTACTTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCAGTTGAAACCATCTTTTTTTGTCATAAAGGAAATGCTTGAATCGGATGAACAAGTAATTGCTGCTATTTCTCGTTTTCCAAGCCTACTAATTTATAATTTGAAGGGTAATTTTAAATCTATCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGCATTGAACCCTAGAACTTCTATGCAAAAGGCTGATAGAATGATTCTTGCAGTGAAAACGGTTAAAGAATCAGGCATTGAACCAAAGGCTCCCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAACGAATCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTAGGATGGTCTGAGAATGAGATTTTTTCAGCATTTAAGAAATATCCATATTATTTAACTTGTTCAGAGGAGAAATTGAGGAATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATAGAGAAACTCTAATTACTTACCCTATGTTCTTCAACACTTCACTCGACAAGCGGCTCTATCCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTAAAAAATCTTCTTAAGAACACAAAGATTGCTCGGGTTATTTTACTACGAGGGGAGAAAGAATTTATGGAGAAATACGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAGAGGCAATGTTGCAGCCGAAACCAAATCTGTTCTATAGGATTGCAAAGATGTAAGTTAACAATGTTCTTATATTTTTGAATTTGAGCATCATGATCTTCAAAAGGGAGAGCACTTTTGTTGTTATTGAGCCTACTGTTCTGTTTCAAATAACACTGCTTCTTGAGCTTTTCAAGATCTCTCTCTGTGTTTTCAGGTGGGAGAGCTGTGTTGTTTTTGCATCCAAATTAAGGCTGTTAGTCAGGTAAATCTATTTGGTGTATATTTCTTTCTTTGGACATGTTAATCTTGAAATAGGAGGCCTTTTTGTTTTCCCCTTTTCTAATCTTTTACTCTTTCCTTGAACTTTTGTAAGTTTGTAGACTAATTTTGAATCTAATTGCGTTGAAATAGGGGTGGCTTTTTTTCATTCCTATTGTGGGATGACAAACATTAGACTTATAGATAAACTTCACACACTTCAAAAATTCAAGTCCTTCATCTTTCAACACAAATATACACCTTTTTGAGCCAATAGTTTTAAATAAGTCAATCCAGGCTTCTCCACATTGAGGGAAACATTCCAACATTTCTTTTCAATATAAACTCAAGATTTGGGGCTATTGTTCCCCAGAAGATTACCGAAG

Coding sequence (CDS)

ATGTCCAAAATTTCCTCCACATTTCTTCTACATTTCATCCATAAACGTTTTCTCACCACCATTTCTACTTCTACATTGCCTTCACCCTCTCTTTCTACCATCCAATTCCTCACTAATTCATGCGGCCTTTCTTCTGGATCTCCTACCTCCGCCGGTCGAAAGCTCCATTTCGATGAAAAACACATCCACCAGTACGGAGCCATCATCGGTTTCTTCAAATCTCATGGATTCGAGTATCCACAGATCTCCAATTTGATCTCGAGGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTTGAGTTCCTTCAGGAAATCGGGTTCGTCGGTCCTTTACTTCATAAGTTAATTTTATCAACCCCATGGGTGCTTAGCAAAAGCTTAGATTCCCAGTTGAAACCATCATTTTTTTTCATTAAGGAAATTCTTGAATCGGATGAACAAGTAACTGCTGCTGTTATTTATCGTTTTCCAAGCCTTCTAATTAGTGATTGGCGGGGTAATTTTAAATCTAGCTCTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAAAGAAGATGATTGCATTGAACCCTAGAACTTTTATGCAAAAGGCTGATAGAATGATTGATGCAGTGAAAACGGTTAAAGAATTAGGCATTGAACCAAAGGCTCGCATGTTTATTTATGCACTTTTTGTAAGGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTTCAGCATTTAAGAGATATCCATTTTATTTAACATGCTCAGAGGAGAAATTGAGGGATGTTGCAGATTTTTGTTTGAACGCTGCAAAGTTGGATCCAGTAACTCTAATTACTTACCCTGAGTTCTTCAAGTCTTCAATCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAAATAAAAAAGATTGGTCCGGTGCTTTTACGAGGGGAGAGAGAATTTGTGGAGAAATATGTAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCGTGGCAATGTCGCAGCCGAAACCAAAAGTGTTGTATAG

Protein sequence

MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEKHIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMDIYRGNVAAETKSVV

Homology

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BLAST of Cucsat.G9609.T11 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 8.7e-10
Identity = 72/299 (24.08%), Postives = 125/299 (41.81%), Query Frame = 0


Query: 76  GFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDS 135
           G    QI  +  +  +     +   +KP  EFL ++G     +  ++   P +   SL  
Sbjct: 207 GLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTD 266

Query: 136 QLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGVPSRNIKKMI 195
            LKP+  F+ E L  D+   A +I RFP++L    R    S+ + L+  G+    I +++
Sbjct: 267 NLKPTMAFL-ETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRIL 326

Query: 196 ALNPRTFMQKA-DRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLG 255
              P        D++   ++  + L ++    +        LS+ +S  K         G
Sbjct: 327 TRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSI-ESNLKPVTEFFLEKG 386

Query: 256 WSEKEIFSAFKRYPFYLTCS-EEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQP 315
           +   EI     RY    T S +E +    D+           L+ +P+FF  S+++R++P
Sbjct: 387 FGLDEIGIMISRYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSLQERIKP 446

Query: 316 RYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMDIYRGNVAAETKS 373
           RY++++   V+ LL       VL     EF EK V K       +M +   NV AE  S
Sbjct: 447 RYELVQRSGVRLLL-----NQVLSLSGIEF-EKVVKK------KMMKLVSNNVIAEQSS 489

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BLAST of Cucsat.G9609.T11 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.3e-08
Identity = 51/252 (20.24%), Postives = 107/252 (42.46%), Query Frame = 0


Query: 69  IGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWV 128
           I +    G    Q+ ++I+R P +L  RV   +KP  E L+ IG     + ++I   P+V
Sbjct: 220 IAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYV 279

Query: 129 LSKSLDSQLKPSFFFIKEILESD--EQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGV 188
           L   L+ ++KP+   I+ +LE    ++  A ++ ++P +L  + R    +   +  S   
Sbjct: 280 LGFGLEDKVKPN---IEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQQSLFESS-- 339

Query: 189 PSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKK 248
                   I ++   F +  +RM  A+                       S+  +   K 
Sbjct: 340 --------ILVSSEDFGRVIERMPQAI-----------------------SLGRTAVLKH 399

Query: 249 INVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSS 308
           +N + S G+   ++       P  L  + + ++   ++  N  + D   L+ +P FF   
Sbjct: 400 VNFLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTYG 435

Query: 309 IEKRLQPRYKVL 319
           +E  ++PR++++
Sbjct: 460 LESTVRPRHEMV 435

[Close]

BLAST of Cucsat.G9609.T11 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 50/238 (21.01%), Postives = 102/238 (42.86%), Query Frame = 0


Query: 81  QISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHKLILSTPWVLSKSLDSQLKPS 140
           Q+ ++I+R P +L  RV   +KP  E L+ IG     + ++I   P+VL   L  ++KP+
Sbjct: 223 QVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPN 282

Query: 141 FFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGVPSRNIKKMIALNPR 200
              + +I    E + A+++ ++P +L  + R    +   +  S  + SR           
Sbjct: 283 IEALVDIGVRKEAL-ASIVMQYPDVLGLELRDKLVAQQSLFESSILVSR----------E 342

Query: 201 TFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMNDSTWKKKINVMKSLGWSEKEI 260
            F +  +RM  A+                       S+  +   K +N + + G+   ++
Sbjct: 343 DFGRVLERMPQAI-----------------------SLGRAAVLKHVNFLTACGFMLSQV 402

Query: 261 FSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYPEFFKSSIEKRLQPRYKVL 319
                  P  L  + + +R   ++  N  + D   L+ +P FF   IE  ++PR++++
Sbjct: 403 SKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMV 426

[Close]

BLAST of Cucsat.G9609.T11 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.1e-07
Identity = 38/166 (22.89%), Postives = 74/166 (44.58%), Query Frame = 0


Query: 68  IIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGF-VGPLLHKLILSTP 127
           ++ FF++ G    Q+  +I   P ++   + T L     FL  +G     ++ K+++  P
Sbjct: 117 LLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNP 176

Query: 128 WVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDILASEGV 187
           +++  S+D +L+P+  F+K  +   E    +V+  FP LL  D     K + D L   G 
Sbjct: 177 FLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGF 236

Query: 188 PSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYAL 233
               I  M+   P+            +K+VK   ++P+ R  +  +
Sbjct: 237 GDSQIATMVTGYPQIL----------IKSVKN-SLQPRIRFLVQVM 271

[Close]

BLAST of Cucsat.G9609.T11 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.3e-07
Identity = 46/263 (17.49%), Postives = 112/263 (42.59%), Query Frame = 0


Query: 59  EKHIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIG-----F 118
           +K +     +I F +  G        +I+RRP IL S + + L P+ +F++ +       
Sbjct: 213 QKSVEDIERLISFLEPFGG-----IGIIARRPVILNSDLDSQLIPRVDFIRNLSGEDDFA 272

Query: 119 VGPLLHKLILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGN 178
            G +L +L    P +LS S++  +     F+K       +    +++ FP+++ +     
Sbjct: 273 TGTVLRRL----PAILSYSVE-HMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERK 332

Query: 179 FKSSSDILASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALF 238
            +   + L   G  S  + K ++  P       + +   +  + ++G + + +   +A+ 
Sbjct: 333 LRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMG 392

Query: 239 VRLSMNDSTWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDP 298
                +    ++ I +  S G S ++I +   ++P  L  +   L +  ++ +     + 
Sbjct: 393 AVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREV 452

Query: 299 VTLITYPEFFKSSIEKRLQPRYK 317
             L+ +P F    ++ R++ RY+
Sbjct: 453 EELLAFPAFLGYKLDSRIKHRYE 465

[Close]

BLAST of Cucsat.G9609.T11 vs. NCBI nr
Match: XP_011655534.2 (transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KAE8648645.1 hypothetical protein Csa_007996 [Cucumis sativus])

HSP 1 Score: 725 bits (1871), Expect = 2.82e-263
Identity = 372/374 (99.47%), Postives = 372/374 (99.47%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISST LLHFIHKRFL TISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK
Sbjct: 1   MSKISSTLLLHFIHKRFLNTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI
Sbjct: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND
Sbjct: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP
Sbjct: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD
Sbjct: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IYRGNVAAETKSVV
Sbjct: 361 IYRGNVAAETKSVV 374

[Close]

BLAST of Cucsat.G9609.T11 vs. NCBI nr
Match: XP_031741662.1 (transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KAE8648646.1 hypothetical protein Csa_008275 [Cucumis sativus])

HSP 1 Score: 610 bits (1572), Expect = 1.01e-217
Identity = 320/375 (85.33%), Postives = 338/375 (90.13%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK SST LLHFIHKRFL TISTSTLPSPS STIQFLTNSCGLSSGSPTS GRKL FDEK
Sbjct: 1   MSKFSSTSLLHFIHKRFLNTISTSTLPSPSFSTIQFLTNSCGLSSGSPTSGGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HIHQY AIIGF KSHGF+YPQI+ LISRRPSILQS+VS NLKPKFEFLQEIGFVGPLLHK
Sbjct: 61  HIHQYEAIIGFLKSHGFQYPQIAKLISRRPSILQSKVSNNLKPKFEFLQEIGFVGPLLHK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           L+LSTPWVL  SLDSQLKPSFF IKE+LESDEQV AA I RFPSLLI + +GNFKS SDI
Sbjct: 121 LLLSTPWVLGSSLDSQLKPSFFVIKEMLESDEQVIAA-ISRFPSLLIYNLKGNFKSISDI 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMIALNPRT MQKADRMI AVKTVKE GIEPKA MFIYALFVRLSMN+
Sbjct: 181 LASEGVPSRNIAKMIALNPRTSMQKADRMILAVKTVKESGIEPKAPMFIYALFVRLSMNE 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINV+KSLGWSE EIFSAFK+YP+YLTCSEEKLR+VADFC N AKLD  TLITYP
Sbjct: 241 STWKKKINVLKSLGWSENEIFSAFKKYPYYLTCSEEKLRNVADFCFNTAKLDRETLITYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPV-LLRGEREFVEKYVVKHLDEIPNLM 360
            FF +S++KRL PRYKVLEVLKVKNLLK  KI  V LLRGE+EF+EKYVVKHLDEIPNLM
Sbjct: 301 MFFNTSLDKRLYPRYKVLEVLKVKNLLKNTKIARVILLRGEKEFMEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNVAAETKSVV 374
           DIYRGNVAAETKSV+
Sbjct: 361 DIYRGNVAAETKSVL 374

[Close]

BLAST of Cucsat.G9609.T11 vs. NCBI nr
Match: KAA0034116.1 (transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 565 bits (1456), Expect = 4.45e-200
Identity = 292/374 (78.07%), Postives = 325/374 (86.90%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]

BLAST of Cucsat.G9609.T11 vs. NCBI nr
Match: XP_008445933.1 (PREDICTED: transcription termination factor MTERF2, chloroplastic-like [Cucumis melo] >TYK15804.1 transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 564 bits (1454), Expect = 8.98e-200
Identity = 291/374 (77.81%), Postives = 325/374 (86.90%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK+SS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]

BLAST of Cucsat.G9609.T11 vs. NCBI nr
Match: XP_008445932.1 (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15810.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 563 bits (1451), Expect = 2.66e-199
Identity = 286/375 (76.27%), Postives = 327/375 (87.20%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHF H RFL T+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGA+I F KSHGFE  QI+NL+S+RPSILQS+VSTNLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVL  SLDSQLKPSFFF+K+ILESDEQVTAA+  RFPSLL+SD +GN KS+ D+
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAIC-RFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI ++PRT MQK DRMI  VK VKELGIEPK R F++A+ +R S++D
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSE EI +AFK+ P YL+CSEEKLRDV DFCLN AKLDP T+I+YP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIK-KIGPVLLRGEREFVEKYVVKHLDEIPNLM 360
             F S+++KRL+PR+K+LE LKVK+LLK   KI   L+RGEREFVE+YVVKHLD+IPNLM
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLM 360

Query: 361 DIYRGNVAAETKSVV 374
           DIYRGNVA ETKSV+
Sbjct: 361 DIYRGNVATETKSVL 374

[Close]

BLAST of Cucsat.G9609.T11 vs. ExPASy TrEMBL
Match: A0A5A7SW09 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001070 PE=3 SV=1)

HSP 1 Score: 565 bits (1456), Expect = 2.16e-200
Identity = 292/374 (78.07%), Postives = 325/374 (86.90%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]

BLAST of Cucsat.G9609.T11 vs. ExPASy TrEMBL
Match: A0A5D3CXX8 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003080 PE=3 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 4.35e-200
Identity = 291/374 (77.81%), Postives = 325/374 (86.90%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK+SS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]

BLAST of Cucsat.G9609.T11 vs. ExPASy TrEMBL
Match: A0A1S3BDE1 (transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488812 PE=3 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 4.35e-200
Identity = 291/374 (77.81%), Postives = 325/374 (86.90%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSK+SS+FLLHFI  RFL T+ST+TLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGAII F KS GFE  QI+ L+SR PSILQS+VS NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LI+S P +L++SLDSQLKPSFFF+KEILESDEQVT A I+R+PSLLI D +G+ K   D+
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTA-IFRYPSLLICDLKGDLKPHIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           L SEGVPSRNI +MI+L PR  MQK DR+I AVKTVKELGIEPKAR F+YA+ VRLSM+D
Sbjct: 181 LVSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWS+KEIF+AFKR+P YL CSEEK+RDVADFC N AKLDP TLI+YP
Sbjct: 241 STWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIKKIGPVLLRGEREFVEKYVVKHLDEIPNLMD 360
           + FK S +KRL+PRYKVLEVLKVKNLLK KKI  VL+ GER FVEKYVVKHLDEIPNLMD
Sbjct: 301 KLFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMD 360

Query: 361 IYRGNVAAETKSVV 374
           IY GNV AETKSV+
Sbjct: 361 IYVGNVEAETKSVL 373

[Close]

BLAST of Cucsat.G9609.T11 vs. ExPASy TrEMBL
Match: A0A5D3CWR8 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003140 PE=3 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 1.29e-199
Identity = 286/375 (76.27%), Postives = 327/375 (87.20%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHF H RFL T+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGA+I F KSHGFE  QI+NL+S+RPSILQS+VSTNLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVL  SLDSQLKPSFFF+K+ILESDEQVTAA+  RFPSLL+SD +GN KS+ D+
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAIC-RFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI ++PRT MQK DRMI  VK VKELGIEPK R F++A+ +R S++D
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSE EI +AFK+ P YL+CSEEKLRDV DFCLN AKLDP T+I+YP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIK-KIGPVLLRGEREFVEKYVVKHLDEIPNLM 360
             F S+++KRL+PR+K+LE LKVK+LLK   KI   L+RGEREFVE+YVVKHLD+IPNLM
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLM 360

Query: 361 DIYRGNVAAETKSVV 374
           DIYRGNVA ETKSV+
Sbjct: 361 DIYRGNVATETKSVL 374

[Close]

BLAST of Cucsat.G9609.T11 vs. ExPASy TrEMBL
Match: A0A1S3BEP9 (uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=3 SV=1)

HSP 1 Score: 563 bits (1451), Expect = 1.29e-199
Identity = 286/375 (76.27%), Postives = 327/375 (87.20%), Query Frame = 0


Query: 1   MSKISSTFLLHFIHKRFLTTISTSTLPSPSLSTIQFLTNSCGLSSGSPTSAGRKLHFDEK 60
           MSKISS+FLLHF H RFL T+STSTLP PS+STIQFLTNSCGLSSGSPTSAGRKL FDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIHQYGAIIGFFKSHGFEYPQISNLISRRPSILQSRVSTNLKPKFEFLQEIGFVGPLLHK 120
           HI QYGA+I F KSHGFE  QI+NL+S+RPSILQS+VSTNLKP+FEF QEIGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 LILSTPWVLSKSLDSQLKPSFFFIKEILESDEQVTAAVIYRFPSLLISDWRGNFKSSSDI 180
           LILSTPWVL  SLDSQLKPSFFF+K+ILESDEQVTAA+  RFPSLL+SD +GN KS+ D+
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAIC-RFPSLLVSDLKGNLKSNIDV 180

Query: 181 LASEGVPSRNIKKMIALNPRTFMQKADRMIDAVKTVKELGIEPKARMFIYALFVRLSMND 240
           LASEGVPSRNI KMI ++PRT MQK DRMI  VK VKELGIEPK R F++A+ +R S++D
Sbjct: 181 LASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSD 240

Query: 241 STWKKKINVMKSLGWSEKEIFSAFKRYPFYLTCSEEKLRDVADFCLNAAKLDPVTLITYP 300
           STWKKKINVMKSLGWSE EI +AFK+ P YL+CSEEKLRDV DFCLN AKLDP T+I+YP
Sbjct: 241 STWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYP 300

Query: 301 EFFKSSIEKRLQPRYKVLEVLKVKNLLKIK-KIGPVLLRGEREFVEKYVVKHLDEIPNLM 360
             F S+++KRL+PR+K+LE LKVK+LLK   KI   L+RGEREFVE+YVVKHLD+IPNLM
Sbjct: 301 TLFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLM 360

Query: 361 DIYRGNVAAETKSVV 374
           DIYRGNVA ETKSV+
Sbjct: 361 DIYRGNVATETKSVL 374

The following BLAST results are available for this feature:

BLAST of Cucsat.G9609.T11 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	8.7e-10	24.08	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	6.3e-08	20.24	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	1.4e-07	21.01	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
Q9SZL6	3.1e-07	22.89	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q9FK23	5.3e-07	17.49	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Cucsat.G9609.T11 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655534.2	2.82e-263	99.47	transcription termination factor MTEF1, chloroplastic-like [Cucumis sativus] >KA...	[more]
XP_031741662.1	1.01e-217	85.33	transcription termination factor MTERF9, chloroplastic [Cucumis sativus] >KAE864...	[more]
KAA0034116.1	4.45e-200	78.07	transcription termination factor MTERF2 [Cucumis melo var. makuwa]	[more]
XP_008445933.1	8.98e-200	77.81	PREDICTED: transcription termination factor MTERF2, chloroplastic-like [Cucumis ...	[more]
XP_008445932.1	2.66e-199	76.27	PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo] >KAA0034111.1 tra...	[more]

BLAST of Cucsat.G9609.T11 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SW09	2.16e-200	78.07	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CXX8	4.35e-200	77.81	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BDE1	4.35e-200	77.81	transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A5D3CWR8	1.29e-199	76.27	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BEP9	1.29e-199	76.27	uncharacterized protein LOC103488811 OS=Cucumis melo OX=3656 GN=LOC103488811 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 367..374
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 20..366
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 294..324 e-value: 1.6 score: 17.8 coord: 83..114 e-value: 7.1E-5 score: 32.2 coord: 261..292 e-value: 4.3 score: 16.3 coord: 119..150 e-value: 2.2 score: 17.3 coord: 226..256 e-value: 370.0 score: 7.2 coord: 192..222 e-value: 32.0 score: 13.4 coord: 156..187 e-value: 1800.0 score: 1.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 179..324 e-value: 2.0E-19 score: 69.7 coord: 70..222 e-value: 6.9E-19 score: 67.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 20..366
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 136..357 e-value: 1.0E-36 score: 128.5

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G9609	Cucsat.G9609	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9609.T11.E1	Cucsat.G9609.T11.E1	exon
Cucsat.G9609.T11.E2	Cucsat.G9609.T11.E2	exon
Cucsat.G9609.T11.E3	Cucsat.G9609.T11.E3	exon
Cucsat.G9609.T11.E4	Cucsat.G9609.T11.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9609.T11.C2	Cucsat.G9609.T11.C2	CDS
Cucsat.G9609.T11.C1	Cucsat.G9609.T11.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9609.T11	Cucsat.G9609.T11-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006353	DNA-templated transcription, termination
molecular_function	GO:0003690	double-stranded DNA binding