Cucsat.G9025.T9 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G9025.T9
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptiontranscription factor PIF4-like
Locationctg1635: 1126689 .. 1131125 (+)
RNA-Seq ExpressionCucsat.G9025.T9
SyntenyCucsat.G9025.T9
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGTTTTAAATGCTTTTTGGTCCATTGCTCATTTCCTCCTCCATTGCATTTGCTCTGGAGTTTGAGTTTTTCTTTTTTGCTCATTTACAAAGAGAAAGAAACAGATTTTAAGTAAAGGGTCACTTCAATTTCCAGCTGAAATTTGGGATTTCTTCAGGTTTTTGTTTCTTTTCGTCATGTTTTTTTTTTTTTTTTTTGTTTATGGCTATTGGGTTTTTTCTCCTTTTTGCTTCCCCTCCCTTTTTTAGGGGTTCTTTCTTCTTTCCTTCTTTTTTCTGCTTGGTGTTTCCATTGAAACCCCTTTTTTGTGTCTTTTATCTATTTTAAAGTCGTTGTGAATTGTGGTGATAATATAAAATAATGGATTTGGTTCTTGGGGAAGAAAAGTTTCTGTTTCGGTTTCTGTATGTGTTTTTACCCAATTTAGACAGACAGCTTTTGCCCCTTTTTTTGAAAATTTTGTTTTGTTTTTCAACCTCTCTGAATCCTCTGTTTCGTGTTCTGAATTCTTCAAGATTCTGTTTCCTCTTCTCTATTTGAAAGGGTTGATATGGTTATGGTGTTTTCTAATGATTTGTTTGGTTTAGAGAGTCAATTGTGTAAATTATTTAATTAAAAGTGTCATTAAATACTACTTTATTTGGACTTTCTTCTCACTCTTTTGCTTAATTTCATGGGTTTTAATAAATGGGGACAGCAAATCTCTTTATTAATTATTTTATTTCTTTTCTTGGTCAATTGCTAACCTAGATTTTGTAGTTTTTTTTGAATAATAATTTGTGGGGATTTCTTGTTTTCTACTTTTCAAGCCTCAAAGTATGGATTAAAGCTTGGTGTTGTTGTAACAGAACAAGAATATTTTCCTAATTTGTGATTTTTAGGGTTATTTTCTTTATCTTATTTATTGTTTCATTTTGACAGAGATTCTGTGTCAAAGCAGCCATGAATTATTGCTTTCCTGATTGGAATTTTGAGGGTGACATTCCCCCAGCTAAGAAATCAATGGGGTTGGCTCTCTTTTTCTCTCCCTCTTTTTTGCATTCTCTTTCTCTATCTAGTTGTTTCAAATTTCTAAGAGAGGGGGAAAATATTGGTATACTCTTGAGCTTGGTATTTTGTGTATTTTTCTTTAAGCTTGGATGGGGATTTTGCAGACCTGAACATGATGATCTTGTGGAACTTTTATGGAGAAATGGTCAAGTGGTCTTACAAAGCCAAAAAGCTAGAAAATCAAGTTTAATTGCTAATGAAGTAAGGCAATTTCAAAAACAGAATCAACCACTTTACAGGAGTAATGTGTCTTGTGGAAATTCAAGCAATTTGATTCAAGATGATGAGACAGTCTCTTGGATACAAGATCCGCTTGATGATTCGTTCGAGAAGGAATTTTGTTCCAATTTCTTCTCCGAATTACCACCTGCTGATCCTATTGAGATTGTTAAGCAGCCTATCAAACATTTCCAAGATGACAAGCAAACAAAGATTTGGTGCCTTTGATACTGCTACTCATGTTACTTTTGGGAATTTTGTGAAGAAAAACTCGAAGCCGCCTGCATCTCTTGCAGAGTTCCCTATGAACACTATGCCTCCTCCGAGATTTCAGTTTCAAGATTCGTCACGGCAGAACAAGGATTTAGGAGATTTAGGAAAATTGGTGAATTTTTCTCAAGTTCCTGTGCCTCCCTTGAAGGGTGACCTGGGATCATCAAATGGGGGGAGAGAGTCTGGAAACTTGATACAGGGAGAGGGAAGAGATTGTTCGGGAATGACAGTTGGTTCGAGCCATTGTGGTAGCAATCAAGTTCCTAATCCAAATGACCTGGATTTGAGCCGAGTTTCAACAAGTGGTTTTGGAAATGCTGGTTTATCTGCTGGTTTCTCCAAGGAAGATAATAGAAAGATGGTTGCACAAGGTGAGAGGGACAAAACTGAGACCATGGATCCAACTGCCACTTCATCCTCAGGCGGTTCGGGAAGTAGTATGGACAGAAGTAGAACAATTGGACAATCTACTGGAGGTAACGGCAACAAAAGAAAAGGCCGAGACGGAGAAGAATCCGAGTGCCAAAGTGAGGTAAAATTATCAAGCATTCTTTTTTTCTATTGCTAGGCTCATTAGTTATACTTTTTAGACGTGAACACAACTTAACATTTTCTGTAGACTGCTGAACTCGAATCTGCTGAGGGAAACAAGACAGCTCCACGATCTGGATCTTCTCGCAGGACCCGTGCTGCTGAAGTGCATAACCTTTCAGAAAGGGTAGGATATTAAAAGTTCCCCATTTGTCAATCTTTTTCCTATACTGAATCCTATGTTAAAAGCTTGCTTGTAATGCAGAGGAGAAGAGAAAGGATAAATGAAAAGATGAAAGCACTGCAAGAACTCATTCCACACTGTAATAAGGTATTTGCATACCACATCTAGTCTTCCATTTTTTAATTCTTTATTATTTCTTGATGATTAAATTTTGCTACAACGTTATTAGCGATAATAGAAAAGTCTAACTAGAACTTTTCGGATTTATCCTTAGTAATAGTTGTTGGATCTAATCGAGAAAGAACGTGTAAAGGATTTTTTCCTTTTCTTTTTACTTGTCATAAATTTATATATGTCAACTTCAAGCTGGAACTAACAATGATTGAAACAAATTCATTCAACTTGCGTGACTTCAAAATTTTCAGTCTACCTGAATCTTGTACTCTTTAGTAATTAGTCCTTTTGTCACAGACTGACAAAGCTTCAATGCTAGATGAAGCTATTGAATATTTGAAGTCACTTCAATTACAACTACAGGTATGAGTTTAACCAAGAATTCCACAAAATCTACTGATCTTTCTACATACAATACAAGCCACAAATTTCTTTTGTAATTGCTTAATGTTCAATAGGTAATGTGGATGGGAAGTGGGATGGCGCCCATGATGTTTCCCGGCGTTCAACATTACATGTCTCGAGTGGCTATGGGCATGGGTATGGCCCAACCTTCAATGCCTTCAATTCACAACCCAATGCAATTACCTCGGGTCCCGATTGTCGATCAATCAGTTTCAGTGGCTCCAACACCAAACCAACCTATGATGTGCCAACCGCAAATGTTCAACCCGATGAATTATCAAAATCAGATGCAGAATCCCGCTTTGCAAGAGCAGTATGCTCGTCTAATGGGATTCCATCATATGCAACCTACCTCACAGGTTAGAAATCAGATTGTGTTTGGAGTTTTTCCTTTGGATGTTTTCTTGTAAAAAAAGCCTACTAACAATTCTGACTAATTCTATCTTGTTTTGTTCTTCAGCCCATAAATGTGTTCAGATTTTGTCCCTCAGCAGTCTTGCAGAGTCAACCTGCAGCAGCACCTGGCCCTGCTAGTGGTCCTACTGCTGGAGGATCTATAACCAATGATATTGTAAATGGAAATTTGGGTAAGTCTTGTGGATCTTTCTTATTGTATCATTAACAAGTGATTAATATTAATCTGACTTGGATACGACTTCTTTTATAGTAATCAATGATGTTTATATGTGTCGGTAGTAAAATAATTTAGTTATTGTCCAAATCTAACATCTTCGCAAGAGTGCCTGTCCCTTGTTTGGGGCATAAGGGGGGAGAGAGAGTAAGTGGATGAATCATGTTGAAAGTTTGAGAACCTTTTTTTGCTGATTCTACCAATCTTGGACATAATGAGTGGTTACAAGAAATAACTGAGTTCATATGATGCCTTATCTTCTCAAATAGGCACCTACCTTTTTCTCTCTCCAAAAGGGTACCAAGTCATCTAAATCTTTACCCTTCAAAAATTTTCGCATAGTTGTCGGCCAATTTGTTCCTTCCCTACTAGTGGCTCTCTTTACAAGTCGTAGTTTCGAGTGTAAATGCACGGTGGCCAAATTGAAAGACAAATACCCTATGGAATTAAAACTGCATTCCCTCTTTTTGAATCTGATACCGCAAGTGTGTCTCTCGGTCACGTAGCTGTCGTTGACAGTCTTTTTCTTTTGCTGATGTTAACAGGTTGACAAGTGAAATTATCCATGTTTATCAGTTAGCTAAGGTTCCTTCTCGGTTTATTGCGAAGCATCATTCCTCGATATGGTGGAAACCATGATTGTTGGTTCTTTGTGTATATCTGATACAGATTCTTGCCTCCTTGCCCTCCAAGTACACAGCTTATATGCTTTCCAACTTCATTACCATATTACATAATAGTAATGGAAGAAGCTTCATTAATCTGTATATTGTTGAGACAGCTAAAAACTCAAGATTCAAATCTTGCAATTCAAGGTATTTAACAAAAAAATTTTGTCAAAGAACGCTTTACGAAATAAGATCAACTAGTTTGTTTCTGTCCAGCTTAAGCTCATTTGTATGTACTATCTCTTAAACTGTCAATGAATTGAAAATAAGTTGATTTTGATATTATCCTGCTGCTGTTTAC

Coding sequence (CDS)

ATGATGAGACAGTCTCTTGGATACAAGATCCGCTTGATGATTCGTTCGAGAAGGAATTTTGTTCCAATTTCTTCTCCGAATTACCACCTGCTGATCCTATTGAGATTGTTAAGCAGCCTATCAAACATTTCCAAGATGACAAGCAAACAAAGATTTGGTGCCTTTGATACTGCTACTCATGTTACTTTTGGGAATTTTGTGAAGAAAAACTCGAAGCCGCCTGCATCTCTTGCAGAGTTCCCTATGAACACTATGCCTCCTCCGAGATTTCAGTTTCAAGATTCGTCACGGCAGAACAAGGATTTAGGAGATTTAGGAAAATTGGTGAATTTTTCTCAAGTTCCTGTGCCTCCCTTGAAGGGTGACCTGGGATCATCAAATGGGGGGAGAGAGTCTGGAAACTTGATACAGGGAGAGGGAAGAGATTGTTCGGGAATGACAGTTGGTTCGAGCCATTGTGGTAGCAATCAAGTTCCTAATCCAAATGACCTGGATTTGAGCCGAGTTTCAACAAGTGGTTTTGGAAATGCTGGTTTATCTGCTGGTTTCTCCAAGGAAGATAATAGAAAGATGGTTGCACAAGGTGAGAGGGACAAAACTGAGACCATGGATCCAACTGCCACTTCATCCTCAGGCGGTTCGGGAAGTAGTATGGACAGAAGTAGAACAATTGGACAATCTACTGGAGGTAACGGCAACAAAAGAAAAGGCCGAGACGGAGAAGAATCCGAGTGCCAAAGTGAGACTGCTGAACTCGAATCTGCTGAGGGAAACAAGACAGCTCCACGATCTGGATCTTCTCGCAGGACCCGTGCTGCTGAAGTGCATAACCTTTCAGAAAGGAGGAGAAGAGAAAGGATAAATGAAAAGATGAAAGCACTGCAAGAACTCATTCCACACTGTAATAAGACTGACAAAGCTTCAATGCTAGATGAAGCTATTGAATATTTGAAGTCACTTCAATTACAACTACAGGTATGA

Protein sequence

MMRQSLGYKIRLMIRSRRNFVPISSPNYHLLILLRLLSSLSNISKMTSKQRFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVNFSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVSTSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGGNGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Homology
BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: Q10CH5 (Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 OS=Oryza sativa subsp. japonica OX=39947 GN=PIL13 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.3e-29
Identity = 83/129 (64.34%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 199 KTETMDPTATSSSGGSGSSMDRSRTIGQSTGGNGNKRKGRDGEESECQSETAELESAEGN 258
           ++ T D   TSSSGGSGS+   S    +S   + +KRKGR  E+S+ +SE AE E+ E  
Sbjct: 151 RSSTHDGAGTSSSGGSGSNFGASGLPSES--ASAHKRKGR--EDSDSRSEDAECEATEET 210

Query: 259 KTAPRS-GSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYL 318
           K++ R  GS RRTRAAEVHNLSERRRR+RINEKM+ALQELIPHCNKTDKAS+LDEAIEYL
Sbjct: 211 KSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYL 270

Query: 319 KSLQLQLQV 327
           KSLQ+Q+Q+
Sbjct: 271 KSLQMQVQI 275

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: Q8W2F3 (Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.6e-29
Identity = 105/218 (48.17%), Postives = 127/218 (58.26%), Query Frame = 0

Query: 113 QVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVSTS 172
           QV  PP      SS+G RE+      E    S  TVG SHCGSN  P+ NDLD+S     
Sbjct: 132 QVMPPPKFRLTNSSSGIRET------EMEQYSVTTVGPSHCGSN--PSQNDLDVS----- 191

Query: 173 GFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG-- 232
                             M     ++  E ++P A+SSSGGS S     + I +   G  
Sbjct: 192 ------------------MSHDRSKNIEEKLNPNASSSSGGS-SGCSFGKDIKEMASGRC 251

Query: 233 --NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERIN 292
                KRK  +  +     E+  L  A GNK+  RSGS+RR+RAAEVHNLSERRRR+RIN
Sbjct: 252 ITTDRKRKRINHTD-----ESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRIN 311

Query: 293 EKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 327
           E+MKALQELIPHC+KTDKAS+LDEAI+YLKSLQLQLQV
Sbjct: 312 ERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQV 312

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: Q84LH8 (Transcription factor PIF5 OS=Arabidopsis thaliana OX=3702 GN=PIF5 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25
Identity = 95/190 (50.00%), Postives = 117/190 (61.58%), Query Frame = 0

Query: 144 SGMTVGSSHCGSNQVPNPNDLDLSRVSTSGFGNAGLSAGFSKEDNRKMVAQGERDKTETM 203
           S +TVG SHCGSNQ  N +      VS S              D  K V        E +
Sbjct: 146 SVITVGPSHCGSNQSTNIHQATTLPVSMS--------------DRSKNV-------EERL 205

Query: 204 DPTATSSSGGSGSSMDRS--RTIGQSTGGNGNKRKG--RDGEESECQSE---TAELESAE 263
           D   TSS G SG S  R+   T+  ++     KRK      +ES  QS+   T+  +   
Sbjct: 206 D---TSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTM 265

Query: 264 GNKTAPRSGSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEY 323
           GNK++ RSGS+RR+RAAEVHNLSERRRR+RINE+MKALQELIPHC++TDKAS+LDEAI+Y
Sbjct: 266 GNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDY 311

Query: 324 LKSLQLQLQV 327
           LKSLQ+QLQV
Sbjct: 326 LKSLQMQLQV 311

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: O80536 (Transcription factor PIF3 OS=Arabidopsis thaliana OX=3702 GN=PIF3 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-22
Identity = 79/152 (51.97%), Postives = 105/152 (69.08%), Query Frame = 0

Query: 181 AGFSKEDNRK--MVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGGN-GNKRKG 240
           A  + +DN+K  ++++    K +  +     SS GSG+S+D     G S   +   KRK 
Sbjct: 252 ASATPKDNQKACLISEDSCRKDQESEKAVVCSSVGSGNSLD-----GPSESPSLSLKRKH 311

Query: 241 RDGEESECQSETAELESAEGNKTA--PRSG-SSRRTRAAEVHNLSERRRRERINEKMKAL 300
            + ++ +C SE  E ES +G K A   R+G  S+R+R+AEVHNLSERRRR+RINEKM+AL
Sbjct: 312 SNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRAL 371

Query: 301 QELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 327
           QELIP+CNK DKASMLDEAIEYLKSLQLQ+Q+
Sbjct: 372 QELIPNCNKVDKASMLDEAIEYLKSLQLQVQI 398

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: Q8GZM7 (Transcription factor PIF1 OS=Arabidopsis thaliana OX=3702 GN=PIF1 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.2e-20
Identity = 89/234 (38.03%), Postives = 129/234 (55.13%), Query Frame = 0

Query: 96  SRQNKDLGDLGKLVNFSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGS 155
           S  N+    +   +NFS+     L+GD  +  GG ESG L+         +   S+    
Sbjct: 133 SSTNESRPPVRNFMNFSR-----LRGDFNNGRGG-ESGPLLS------KAVVRESTQVSP 192

Query: 156 NQVPN--PNDLDLSRVSTSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGG 215
           +  P+   ++  L+R  T G  ++ ++ G          A   + K   M   A   +G 
Sbjct: 193 SATPSAAASESGLTR-RTDGTDSSAVAGG---------GAYNRKGKAVAMTAPAIEITGT 252

Query: 216 SGSSMDRSRTIGQSTGGNGNKRKGRDGEES-ECQSETAELESAEGNKTAPRSGSSRRTRA 275
           S S + +S    + T  +  KRK R+   + E +S + E + A  + T     S++R+RA
Sbjct: 253 SSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTT-----STKRSRA 312

Query: 276 AEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 327
           AEVHNLSER+RR+RINE+MKALQELIP CNK+DKASMLDEAIEY+KSLQLQ+Q+
Sbjct: 313 AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 339

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: XP_011653988.1 (transcription factor PIF5 [Cucumis sativus] >XP_011653989.1 transcription factor PIF5 [Cucumis sativus] >KGN54953.1 hypothetical protein Csa_012072 [Cucumis sativus])

HSP 1 Score: 526 bits (1356), Expect = 5.49e-183
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 131 RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 190

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 191 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 250

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 251 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 310

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 311 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 370

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 371 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: XP_008464685.1 (PREDICTED: transcription factor PIF4-like [Cucumis melo] >XP_008464686.1 PREDICTED: transcription factor PIF4-like [Cucumis melo] >XP_008464687.1 PREDICTED: transcription factor PIF4-like [Cucumis melo])

HSP 1 Score: 505 bits (1301), Expect = 1.22e-174
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDT+THVTFGN VKK+SKPPA+LAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 131 RFGAFDTSTHVTFGNSVKKSSKPPAALAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 190

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVP PPLKGDLGSSNGG+ESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 191 FSQVPAPPLKGDLGSSNGGKESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 250

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGF NAGLSAG SKEDNRK+VAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 251 TSGFRNAGLSAGLSKEDNRKLVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 310

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 311 NSNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 370

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 371 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: KAA0032908.1 (transcription factor PIF4-like [Cucumis melo var. makuwa] >TYK28090.1 transcription factor PIF4-like [Cucumis melo var. makuwa])

HSP 1 Score: 505 bits (1301), Expect = 1.18e-173
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDT+THVTFGN VKK+SKPPA+LAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 153 RFGAFDTSTHVTFGNSVKKSSKPPAALAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 212

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVP PPLKGDLGSSNGG+ESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 213 FSQVPAPPLKGDLGSSNGGKESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 272

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGF NAGLSAG SKEDNRK+VAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 273 TSGFRNAGLSAGLSKEDNRKLVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 332

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 333 NSNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 392

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 393 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 428

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: XP_038897580.1 (transcription factor PIF4-like isoform X2 [Benincasa hispida] >XP_038897581.1 transcription factor PIF4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 486 bits (1250), Expect = 6.61e-167
Identity = 262/276 (94.93%), Postives = 264/276 (95.65%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDTATHVTFGN VKKNS P A+LAEFPMNTMPPPRFQF DS RQ KDLGDLGKLVN
Sbjct: 133 RFGAFDTATHVTFGNSVKKNSTP-AALAEFPMNTMPPPRFQFPDSVRQTKDLGDLGKLVN 192

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVPVP +KGDLGSSN GRESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 193 FSQVPVP-VKGDLGSSNRGRESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 252

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAG SKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 253 TSGFGNAGLSAGLSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 312

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNK APRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 313 NSNKRKGRDGEESECQSETAELESAEGNKAAPRSGSSRRTRAAEVHNLSERRRRERINEK 372

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 373 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: XP_038897579.1 (transcription factor PIF4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 486 bits (1250), Expect = 1.28e-166
Identity = 262/276 (94.93%), Postives = 264/276 (95.65%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDTATHVTFGN VKKNS P A+LAEFPMNTMPPPRFQF DS RQ KDLGDLGKLVN
Sbjct: 153 RFGAFDTATHVTFGNSVKKNSTP-AALAEFPMNTMPPPRFQFPDSVRQTKDLGDLGKLVN 212

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVPVP +KGDLGSSN GRESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 213 FSQVPVP-VKGDLGSSNRGRESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 272

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAG SKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 273 TSGFGNAGLSAGLSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 332

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNK APRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 333 NSNKRKGRDGEESECQSETAELESAEGNKAAPRSGSSRRTRAAEVHNLSERRRRERINEK 392

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 393 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 426

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A0A0KZR2 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G615240 PE=4 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 2.66e-183
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 131 RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 190

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 191 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 250

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 251 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 310

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 311 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 370

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 371 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A1S3CMJ5 (transcription factor PIF4-like OS=Cucumis melo OX=3656 GN=LOC103502508 PE=4 SV=1)

HSP 1 Score: 505 bits (1301), Expect = 5.90e-175
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDT+THVTFGN VKK+SKPPA+LAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 131 RFGAFDTSTHVTFGNSVKKSSKPPAALAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 190

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVP PPLKGDLGSSNGG+ESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 191 FSQVPAPPLKGDLGSSNGGKESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 250

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGF NAGLSAG SKEDNRK+VAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 251 TSGFRNAGLSAGLSKEDNRKLVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 310

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 311 NSNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 370

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 371 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A5D3DXW5 (Transcription factor PIF4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003560 PE=4 SV=1)

HSP 1 Score: 505 bits (1301), Expect = 5.73e-174
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDT+THVTFGN VKK+SKPPA+LAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 153 RFGAFDTSTHVTFGNSVKKSSKPPAALAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 212

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVP PPLKGDLGSSNGG+ESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 213 FSQVPAPPLKGDLGSSNGGKESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 272

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGF NAGLSAG SKEDNRK+VAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 273 TSGFRNAGLSAGLSKEDNRKLVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 332

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 333 NSNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 392

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 393 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 428

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A6J1CKT0 (transcription factor PIF4-like OS=Momordica charantia OX=3673 GN=LOC111012049 PE=4 SV=1)

HSP 1 Score: 451 bits (1161), Expect = 1.11e-153
Identity = 244/277 (88.09%), Postives = 254/277 (91.70%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSK-PPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLV 110
           RFGAFD  THV+FGN  + +SK P A+LAEFP NTMPPPRFQ  +S++Q KD GDLGK+V
Sbjct: 133 RFGAFDNTTHVSFGNSQRPSSKHPAAALAEFPTNTMPPPRFQLPNSTQQTKDFGDLGKIV 192

Query: 111 NFSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRV 170
           NFSQVPVP LKGDLGSSNGGRESGNLIQGEGRDCS MTVGSSHCGSNQVPN ND D SRV
Sbjct: 193 NFSQVPVP-LKGDLGSSNGGRESGNLIQGEGRDCSAMTVGSSHCGSNQVPNSNDPDASRV 252

Query: 171 STSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTG 230
           STSGFGNAGLSAG SKED+RKMV QGER KTETMDPT+TSSSGGSGSSMDRSRTIGQS G
Sbjct: 253 STSGFGNAGLSAGLSKEDHRKMVPQGERGKTETMDPTSTSSSGGSGSSMDRSRTIGQSNG 312

Query: 231 GNGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINE 290
           GN NKRKGRDGEESECQSETAELESAEGNK APRSGSSRRTRAAEVHNLSERRRRERINE
Sbjct: 313 GNRNKRKGRDGEESECQSETAELESAEGNKAAPRSGSSRRTRAAEVHNLSERRRRERINE 372

Query: 291 KMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           KMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 373 KMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 408

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A6J1FPI6 (transcription factor PIF4-like OS=Cucurbita moschata OX=3662 GN=LOC111445806 PE=4 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 1.64e-142
Identity = 233/276 (84.42%), Postives = 241/276 (87.32%), Query Frame = 0

Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFG FDT             SK P  LAEF  N+MPPPRFQ  DS+R NKDLGDLG++VN
Sbjct: 129 RFGVFDTT------------SKHPTGLAEFLTNSMPPPRFQCPDSTRSNKDLGDLGEMVN 188

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
            S+V VP LKGDLGSSNGGRE GNLIQ EGRDCS MTVGSSHCGSNQVPNPNDLD+SRVS
Sbjct: 189 SSRVCVP-LKGDLGSSNGGRECGNLIQVEGRDCSAMTVGSSHCGSNQVPNPNDLDVSRVS 248

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAG SKEDNRKMV Q ERDKTETMDPT TSSSGGSGSSMDR+RTIGQSTGG
Sbjct: 249 TSGFGNAGLSAGLSKEDNRKMVPQSERDKTETMDPTTTSSSGGSGSSMDRNRTIGQSTGG 308

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRD EESECQSETAELESAEGN+TAPRSGSSRRTR AEVHNLSERRRRERINEK
Sbjct: 309 NSNKRKGRDREESECQSETAELESAEGNRTAPRSGSSRRTRVAEVHNLSERRRRERINEK 368

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 369 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 391

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q10CH54.3e-2964.34Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 OS=Oryza sativa subs... [more]
Q8W2F35.6e-2948.17Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1[more]
Q84LH81.3e-2550.00Transcription factor PIF5 OS=Arabidopsis thaliana OX=3702 GN=PIF5 PE=1 SV=1[more]
O805361.3e-2251.97Transcription factor PIF3 OS=Arabidopsis thaliana OX=3702 GN=PIF3 PE=1 SV=1[more]
Q8GZM76.2e-2038.03Transcription factor PIF1 OS=Arabidopsis thaliana OX=3702 GN=PIF1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_011653988.15.49e-183100.00transcription factor PIF5 [Cucumis sativus] >XP_011653989.1 transcription factor... [more]
XP_008464685.11.22e-17496.01PREDICTED: transcription factor PIF4-like [Cucumis melo] >XP_008464686.1 PREDICT... [more]
KAA0032908.11.18e-17396.01transcription factor PIF4-like [Cucumis melo var. makuwa] >TYK28090.1 transcript... [more]
XP_038897580.16.61e-16794.93transcription factor PIF4-like isoform X2 [Benincasa hispida] >XP_038897581.1 tr... [more]
XP_038897579.11.28e-16694.93transcription factor PIF4-like isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0KZR22.66e-183100.00BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G615240 PE=4 S... [more]
A0A1S3CMJ55.90e-17596.01transcription factor PIF4-like OS=Cucumis melo OX=3656 GN=LOC103502508 PE=4 SV=1[more]
A0A5D3DXW55.73e-17496.01Transcription factor PIF4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1CKT01.11e-15388.09transcription factor PIF4-like OS=Momordica charantia OX=3673 GN=LOC111012049 PE... [more]
A0A6J1FPI61.64e-14284.42transcription factor PIF4-like OS=Cucurbita moschata OX=3662 GN=LOC111445806 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 238..258
NoneNo IPR availableCOILSCoilCoilcoord: 277..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..203
NoneNo IPR availablePANTHERPTHR45855:SF36TRANSCRIPTION FACTOR PIF5coord: 61..326
NoneNo IPR availableCDDcd11445bHLH_AtPIF_likecoord: 271..326
e-value: 3.51021E-28
score: 102.065
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 277..326
e-value: 1.2E-18
score: 78.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 275..321
e-value: 2.5E-14
score: 53.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 271..320
score: 18.590279
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 266..326
e-value: 5.1E-22
score: 79.3
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 268..325
IPR031066Basic helix-loop-helix (bHLH) transcription factors ALC-like, plantPANTHERPTHR45855TRANSCRIPTION FACTOR PIF1-RELATEDcoord: 61..326

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G9025Cucsat.G9025gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G9025.T9.E1Cucsat.G9025.T9.E1exon
Cucsat.G9025.T9.E2Cucsat.G9025.T9.E2exon
Cucsat.G9025.T9.E3Cucsat.G9025.T9.E3exon
Cucsat.G9025.T9.E4Cucsat.G9025.T9.E4exon
Cucsat.G9025.T9.E5Cucsat.G9025.T9.E5exon
Cucsat.G9025.T9.E6Cucsat.G9025.T9.E6exon
Cucsat.G9025.T9.E7Cucsat.G9025.T9.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G9025.T9.C1Cucsat.G9025.T9.C1CDS
Cucsat.G9025.T9.C2Cucsat.G9025.T9.C2CDS
Cucsat.G9025.T9.C3Cucsat.G9025.T9.C3CDS
Cucsat.G9025.T9.C4Cucsat.G9025.T9.C4CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G9025.T9Cucsat.G9025.T9-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046983 protein dimerization activity