Cucsat.G9025.T9 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G9025.T9
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription factor PIF4-like
Location	ctg1635: 1126689 .. 1131125 (+)
RNA-Seq Expression	Cucsat.G9025.T9
Synteny	Cucsat.G9025.T9

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTTTTAAATGCTTTTTGGTCCATTGCTCATTTCCTCCTCCATTGCATTTGCTCTGGAGTTTGAGTTTTTCTTTTTTGCTCATTTACAAAGAGAAAGAAACAGATTTTAAGTAAAGGGTCACTTCAATTTCCAGCTGAAATTTGGGATTTCTTCAGGTTTTTGTTTCTTTTCGTCATGTTTTTTTTTTTTTTTTTTGTTTATGGCTATTGGGTTTTTTCTCCTTTTTGCTTCCCCTCCCTTTTTTAGGGGTTCTTTCTTCTTTCCTTCTTTTTTCTGCTTGGTGTTTCCATTGAAACCCCTTTTTTGTGTCTTTTATCTATTTTAAAGTCGTTGTGAATTGTGGTGATAATATAAAATAATGGATTTGGTTCTTGGGGAAGAAAAGTTTCTGTTTCGGTTTCTGTATGTGTTTTTACCCAATTTAGACAGACAGCTTTTGCCCCTTTTTTTGAAAATTTTGTTTTGTTTTTCAACCTCTCTGAATCCTCTGTTTCGTGTTCTGAATTCTTCAAGATTCTGTTTCCTCTTCTCTATTTGAAAGGGTTGATATGGTTATGGTGTTTTCTAATGATTTGTTTGGTTTAGAGAGTCAATTGTGTAAATTATTTAATTAAAAGTGTCATTAAATACTACTTTATTTGGACTTTCTTCTCACTCTTTTGCTTAATTTCATGGGTTTTAATAAATGGGGACAGCAAATCTCTTTATTAATTATTTTATTTCTTTTCTTGGTCAATTGCTAACCTAGATTTTGTAGTTTTTTTTGAATAATAATTTGTGGGGATTTCTTGTTTTCTACTTTTCAAGCCTCAAAGTATGGATTAAAGCTTGGTGTTGTTGTAACAGAACAAGAATATTTTCCTAATTTGTGATTTTTAGGGTTATTTTCTTTATCTTATTTATTGTTTCATTTTGACAGAGATTCTGTGTCAAAGCAGCCATGAATTATTGCTTTCCTGATTGGAATTTTGAGGGTGACATTCCCCCAGCTAAGAAATCAATGGGGTTGGCTCTCTTTTTCTCTCCCTCTTTTTTGCATTCTCTTTCTCTATCTAGTTGTTTCAAATTTCTAAGAGAGGGGGAAAATATTGGTATACTCTTGAGCTTGGTATTTTGTGTATTTTTCTTTAAGCTTGGATGGGGATTTTGCAGACCTGAACATGATGATCTTGTGGAACTTTTATGGAGAAATGGTCAAGTGGTCTTACAAAGCCAAAAAGCTAGAAAATCAAGTTTAATTGCTAATGAAGTAAGGCAATTTCAAAAACAGAATCAACCACTTTACAGGAGTAATGTGTCTTGTGGAAATTCAAGCAATTTGATTCAAGATGATGAGACAGTCTCTTGGATACAAGATCCGCTTGATGATTCGTTCGAGAAGGAATTTTGTTCCAATTTCTTCTCCGAATTACCACCTGCTGATCCTATTGAGATTGTTAAGCAGCCTATCAAACATTTCCAAGATGACAAGCAAACAAAGATTTGGTGCCTTTGATACTGCTACTCATGTTACTTTTGGGAATTTTGTGAAGAAAAACTCGAAGCCGCCTGCATCTCTTGCAGAGTTCCCTATGAACACTATGCCTCCTCCGAGATTTCAGTTTCAAGATTCGTCACGGCAGAACAAGGATTTAGGAGATTTAGGAAAATTGGTGAATTTTTCTCAAGTTCCTGTGCCTCCCTTGAAGGGTGACCTGGGATCATCAAATGGGGGGAGAGAGTCTGGAAACTTGATACAGGGAGAGGGAAGAGATTGTTCGGGAATGACAGTTGGTTCGAGCCATTGTGGTAGCAATCAAGTTCCTAATCCAAATGACCTGGATTTGAGCCGAGTTTCAACAAGTGGTTTTGGAAATGCTGGTTTATCTGCTGGTTTCTCCAAGGAAGATAATAGAAAGATGGTTGCACAAGGTGAGAGGGACAAAACTGAGACCATGGATCCAACTGCCACTTCATCCTCAGGCGGTTCGGGAAGTAGTATGGACAGAAGTAGAACAATTGGACAATCTACTGGAGGTAACGGCAACAAAAGAAAAGGCCGAGACGGAGAAGAATCCGAGTGCCAAAGTGAGGTAAAATTATCAAGCATTCTTTTTTTCTATTGCTAGGCTCATTAGTTATACTTTTTAGACGTGAACACAACTTAACATTTTCTGTAGACTGCTGAACTCGAATCTGCTGAGGGAAACAAGACAGCTCCACGATCTGGATCTTCTCGCAGGACCCGTGCTGCTGAAGTGCATAACCTTTCAGAAAGGGTAGGATATTAAAAGTTCCCCATTTGTCAATCTTTTTCCTATACTGAATCCTATGTTAAAAGCTTGCTTGTAATGCAGAGGAGAAGAGAAAGGATAAATGAAAAGATGAAAGCACTGCAAGAACTCATTCCACACTGTAATAAGGTATTTGCATACCACATCTAGTCTTCCATTTTTTAATTCTTTATTATTTCTTGATGATTAAATTTTGCTACAACGTTATTAGCGATAATAGAAAAGTCTAACTAGAACTTTTCGGATTTATCCTTAGTAATAGTTGTTGGATCTAATCGAGAAAGAACGTGTAAAGGATTTTTTCCTTTTCTTTTTACTTGTCATAAATTTATATATGTCAACTTCAAGCTGGAACTAACAATGATTGAAACAAATTCATTCAACTTGCGTGACTTCAAAATTTTCAGTCTACCTGAATCTTGTACTCTTTAGTAATTAGTCCTTTTGTCACAGACTGACAAAGCTTCAATGCTAGATGAAGCTATTGAATATTTGAAGTCACTTCAATTACAACTACAGGTATGAGTTTAACCAAGAATTCCACAAAATCTACTGATCTTTCTACATACAATACAAGCCACAAATTTCTTTTGTAATTGCTTAATGTTCAATAGGTAATGTGGATGGGAAGTGGGATGGCGCCCATGATGTTTCCCGGCGTTCAACATTACATGTCTCGAGTGGCTATGGGCATGGGTATGGCCCAACCTTCAATGCCTTCAATTCACAACCCAATGCAATTACCTCGGGTCCCGATTGTCGATCAATCAGTTTCAGTGGCTCCAACACCAAACCAACCTATGATGTGCCAACCGCAAATGTTCAACCCGATGAATTATCAAAATCAGATGCAGAATCCCGCTTTGCAAGAGCAGTATGCTCGTCTAATGGGATTCCATCATATGCAACCTACCTCACAGGTTAGAAATCAGATTGTGTTTGGAGTTTTTCCTTTGGATGTTTTCTTGTAAAAAAAGCCTACTAACAATTCTGACTAATTCTATCTTGTTTTGTTCTTCAGCCCATAAATGTGTTCAGATTTTGTCCCTCAGCAGTCTTGCAGAGTCAACCTGCAGCAGCACCTGGCCCTGCTAGTGGTCCTACTGCTGGAGGATCTATAACCAATGATATTGTAAATGGAAATTTGGGTAAGTCTTGTGGATCTTTCTTATTGTATCATTAACAAGTGATTAATATTAATCTGACTTGGATACGACTTCTTTTATAGTAATCAATGATGTTTATATGTGTCGGTAGTAAAATAATTTAGTTATTGTCCAAATCTAACATCTTCGCAAGAGTGCCTGTCCCTTGTTTGGGGCATAAGGGGGGAGAGAGAGTAAGTGGATGAATCATGTTGAAAGTTTGAGAACCTTTTTTTGCTGATTCTACCAATCTTGGACATAATGAGTGGTTACAAGAAATAACTGAGTTCATATGATGCCTTATCTTCTCAAATAGGCACCTACCTTTTTCTCTCTCCAAAAGGGTACCAAGTCATCTAAATCTTTACCCTTCAAAAATTTTCGCATAGTTGTCGGCCAATTTGTTCCTTCCCTACTAGTGGCTCTCTTTACAAGTCGTAGTTTCGAGTGTAAATGCACGGTGGCCAAATTGAAAGACAAATACCCTATGGAATTAAAACTGCATTCCCTCTTTTTGAATCTGATACCGCAAGTGTGTCTCTCGGTCACGTAGCTGTCGTTGACAGTCTTTTTCTTTTGCTGATGTTAACAGGTTGACAAGTGAAATTATCCATGTTTATCAGTTAGCTAAGGTTCCTTCTCGGTTTATTGCGAAGCATCATTCCTCGATATGGTGGAAACCATGATTGTTGGTTCTTTGTGTATATCTGATACAGATTCTTGCCTCCTTGCCCTCCAAGTACACAGCTTATATGCTTTCCAACTTCATTACCATATTACATAATAGTAATGGAAGAAGCTTCATTAATCTGTATATTGTTGAGACAGCTAAAAACTCAAGATTCAAATCTTGCAATTCAAGGTATTTAACAAAAAAATTTTGTCAAAGAACGCTTTACGAAATAAGATCAACTAGTTTGTTTCTGTCCAGCTTAAGCTCATTTGTATGTACTATCTCTTAAACTGTCAATGAATTGAAAATAAGTTGATTTTGATATTATCCTGCTGCTGTTTAC

Coding sequence (CDS)

ATGATGAGACAGTCTCTTGGATACAAGATCCGCTTGATGATTCGTTCGAGAAGGAATTTTGTTCCAATTTCTTCTCCGAATTACCACCTGCTGATCCTATTGAGATTGTTAAGCAGCCTATCAAACATTTCCAAGATGACAAGCAAACAAAGATTTGGTGCCTTTGATACTGCTACTCATGTTACTTTTGGGAATTTTGTGAAGAAAAACTCGAAGCCGCCTGCATCTCTTGCAGAGTTCCCTATGAACACTATGCCTCCTCCGAGATTTCAGTTTCAAGATTCGTCACGGCAGAACAAGGATTTAGGAGATTTAGGAAAATTGGTGAATTTTTCTCAAGTTCCTGTGCCTCCCTTGAAGGGTGACCTGGGATCATCAAATGGGGGGAGAGAGTCTGGAAACTTGATACAGGGAGAGGGAAGAGATTGTTCGGGAATGACAGTTGGTTCGAGCCATTGTGGTAGCAATCAAGTTCCTAATCCAAATGACCTGGATTTGAGCCGAGTTTCAACAAGTGGTTTTGGAAATGCTGGTTTATCTGCTGGTTTCTCCAAGGAAGATAATAGAAAGATGGTTGCACAAGGTGAGAGGGACAAAACTGAGACCATGGATCCAACTGCCACTTCATCCTCAGGCGGTTCGGGAAGTAGTATGGACAGAAGTAGAACAATTGGACAATCTACTGGAGGTAACGGCAACAAAAGAAAAGGCCGAGACGGAGAAGAATCCGAGTGCCAAAGTGAGACTGCTGAACTCGAATCTGCTGAGGGAAACAAGACAGCTCCACGATCTGGATCTTCTCGCAGGACCCGTGCTGCTGAAGTGCATAACCTTTCAGAAAGGAGGAGAAGAGAAAGGATAAATGAAAAGATGAAAGCACTGCAAGAACTCATTCCACACTGTAATAAGACTGACAAAGCTTCAATGCTAGATGAAGCTATTGAATATTTGAAGTCACTTCAATTACAACTACAGGTATGA

Protein sequence

MMRQSLGYKIRLMIRSRRNFVPISSPNYHLLILLRLLSSLSNISKMTSKQRFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVNFSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVSTSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGGNGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV

Homology

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: Q10CH5 (Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 OS=Oryza sativa subsp. japonica OX=39947 GN=PIL13 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.3e-29
Identity = 83/129 (64.34%), Postives = 101/129 (78.29%), Query Frame = 0


Query: 199 KTETMDPTATSSSGGSGSSMDRSRTIGQSTGGNGNKRKGRDGEESECQSETAELESAEGN 258
           ++ T D   TSSSGGSGS+   S    +S   + +KRKGR  E+S+ +SE AE E+ E  
Sbjct: 151 RSSTHDGAGTSSSGGSGSNFGASGLPSES--ASAHKRKGR--EDSDSRSEDAECEATEET 210

Query: 259 KTAPRS-GSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYL 318
           K++ R  GS RRTRAAEVHNLSERRRR+RINEKM+ALQELIPHCNKTDKAS+LDEAIEYL
Sbjct: 211 KSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYL 270

Query: 319 KSLQLQLQV 327
           KSLQ+Q+Q+
Sbjct: 271 KSLQMQVQI 275

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: Q8W2F3 (Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.6e-29
Identity = 105/218 (48.17%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 113 QVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVSTS 172
           QV  PP      SS+G RE+      E    S  TVG SHCGSN  P+ NDLD+S     
Sbjct: 132 QVMPPPKFRLTNSSSGIRET------EMEQYSVTTVGPSHCGSN--PSQNDLDVS----- 191

Query: 173 GFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG-- 232
                             M     ++  E ++P A+SSSGGS S     + I +   G  
Sbjct: 192 ------------------MSHDRSKNIEEKLNPNASSSSGGS-SGCSFGKDIKEMASGRC 251

Query: 233 --NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERIN 292
                KRK  +  +     E+  L  A GNK+  RSGS+RR+RAAEVHNLSERRRR+RIN
Sbjct: 252 ITTDRKRKRINHTD-----ESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRIN 311

Query: 293 EKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 327
           E+MKALQELIPHC+KTDKAS+LDEAI+YLKSLQLQLQV
Sbjct: 312 ERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQV 312

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: Q84LH8 (Transcription factor PIF5 OS=Arabidopsis thaliana OX=3702 GN=PIF5 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25
Identity = 95/190 (50.00%), Postives = 117/190 (61.58%), Query Frame = 0


Query: 144 SGMTVGSSHCGSNQVPNPNDLDLSRVSTSGFGNAGLSAGFSKEDNRKMVAQGERDKTETM 203
           S +TVG SHCGSNQ  N +      VS S              D  K V        E +
Sbjct: 146 SVITVGPSHCGSNQSTNIHQATTLPVSMS--------------DRSKNV-------EERL 205

Query: 204 DPTATSSSGGSGSSMDRS--RTIGQSTGGNGNKRKG--RDGEESECQSE---TAELESAE 263
           D   TSS G SG S  R+   T+  ++     KRK      +ES  QS+   T+  +   
Sbjct: 206 D---TSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQTM 265

Query: 264 GNKTAPRSGSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEY 323
           GNK++ RSGS+RR+RAAEVHNLSERRRR+RINE+MKALQELIPHC++TDKAS+LDEAI+Y
Sbjct: 266 GNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDY 311

Query: 324 LKSLQLQLQV 327
           LKSLQ+QLQV
Sbjct: 326 LKSLQMQLQV 311

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: O80536 (Transcription factor PIF3 OS=Arabidopsis thaliana OX=3702 GN=PIF3 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-22
Identity = 79/152 (51.97%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 181 AGFSKEDNRK--MVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGGN-GNKRKG 240
           A  + +DN+K  ++++    K +  +     SS GSG+S+D     G S   +   KRK 
Sbjct: 252 ASATPKDNQKACLISEDSCRKDQESEKAVVCSSVGSGNSLD-----GPSESPSLSLKRKH 311

Query: 241 RDGEESECQSETAELESAEGNKTA--PRSG-SSRRTRAAEVHNLSERRRRERINEKMKAL 300
            + ++ +C SE  E ES +G K A   R+G  S+R+R+AEVHNLSERRRR+RINEKM+AL
Sbjct: 312 SNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRAL 371

Query: 301 QELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 327
           QELIP+CNK DKASMLDEAIEYLKSLQLQ+Q+
Sbjct: 372 QELIPNCNKVDKASMLDEAIEYLKSLQLQVQI 398

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot
Match: Q8GZM7 (Transcription factor PIF1 OS=Arabidopsis thaliana OX=3702 GN=PIF1 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.2e-20
Identity = 89/234 (38.03%), Postives = 129/234 (55.13%), Query Frame = 0


Query: 96  SRQNKDLGDLGKLVNFSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGS 155
           S  N+    +   +NFS+     L+GD  +  GG ESG L+         +   S+    
Sbjct: 133 SSTNESRPPVRNFMNFSR-----LRGDFNNGRGG-ESGPLLS------KAVVRESTQVSP 192

Query: 156 NQVPN--PNDLDLSRVSTSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGG 215
           +  P+   ++  L+R  T G  ++ ++ G          A   + K   M   A   +G 
Sbjct: 193 SATPSAAASESGLTR-RTDGTDSSAVAGG---------GAYNRKGKAVAMTAPAIEITGT 252

Query: 216 SGSSMDRSRTIGQSTGGNGNKRKGRDGEES-ECQSETAELESAEGNKTAPRSGSSRRTRA 275
           S S + +S    + T  +  KRK R+   + E +S + E + A  + T     S++R+RA
Sbjct: 253 SSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTT-----STKRSRA 312

Query: 276 AEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 327
           AEVHNLSER+RR+RINE+MKALQELIP CNK+DKASMLDEAIEY+KSLQLQ+Q+
Sbjct: 313 AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 339

[Close]

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: XP_011653988.1 (transcription factor PIF5 [Cucumis sativus] >XP_011653989.1 transcription factor PIF5 [Cucumis sativus] >KGN54953.1 hypothetical protein Csa_012072 [Cucumis sativus])

HSP 1 Score: 526 bits (1356), Expect = 5.49e-183
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 131 RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 190

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 191 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 250

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 251 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 310

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 311 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 370

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 371 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

[Close]

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: XP_008464685.1 (PREDICTED: transcription factor PIF4-like [Cucumis melo] >XP_008464686.1 PREDICTED: transcription factor PIF4-like [Cucumis melo] >XP_008464687.1 PREDICTED: transcription factor PIF4-like [Cucumis melo])

HSP 1 Score: 505 bits (1301), Expect = 1.22e-174
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDT+THVTFGN VKK+SKPPA+LAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 131 RFGAFDTSTHVTFGNSVKKSSKPPAALAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 190

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVP PPLKGDLGSSNGG+ESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 191 FSQVPAPPLKGDLGSSNGGKESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 250

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGF NAGLSAG SKEDNRK+VAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 251 TSGFRNAGLSAGLSKEDNRKLVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 310

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 311 NSNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 370

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 371 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

[Close]

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: KAA0032908.1 (transcription factor PIF4-like [Cucumis melo var. makuwa] >TYK28090.1 transcription factor PIF4-like [Cucumis melo var. makuwa])

HSP 1 Score: 505 bits (1301), Expect = 1.18e-173
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDT+THVTFGN VKK+SKPPA+LAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 153 RFGAFDTSTHVTFGNSVKKSSKPPAALAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 212

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVP PPLKGDLGSSNGG+ESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 213 FSQVPAPPLKGDLGSSNGGKESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 272

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGF NAGLSAG SKEDNRK+VAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 273 TSGFRNAGLSAGLSKEDNRKLVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 332

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 333 NSNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 392

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 393 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 428

[Close]

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: XP_038897580.1 (transcription factor PIF4-like isoform X2 [Benincasa hispida] >XP_038897581.1 transcription factor PIF4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 486 bits (1250), Expect = 6.61e-167
Identity = 262/276 (94.93%), Postives = 264/276 (95.65%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDTATHVTFGN VKKNS P A+LAEFPMNTMPPPRFQF DS RQ KDLGDLGKLVN
Sbjct: 133 RFGAFDTATHVTFGNSVKKNSTP-AALAEFPMNTMPPPRFQFPDSVRQTKDLGDLGKLVN 192

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVPVP +KGDLGSSN GRESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 193 FSQVPVP-VKGDLGSSNRGRESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 252

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAG SKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 253 TSGFGNAGLSAGLSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 312

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNK APRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 313 NSNKRKGRDGEESECQSETAELESAEGNKAAPRSGSSRRTRAAEVHNLSERRRRERINEK 372

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 373 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

[Close]

BLAST of Cucsat.G9025.T9 vs. NCBI nr
Match: XP_038897579.1 (transcription factor PIF4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 486 bits (1250), Expect = 1.28e-166
Identity = 262/276 (94.93%), Postives = 264/276 (95.65%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDTATHVTFGN VKKNS P A+LAEFPMNTMPPPRFQF DS RQ KDLGDLGKLVN
Sbjct: 153 RFGAFDTATHVTFGNSVKKNSTP-AALAEFPMNTMPPPRFQFPDSVRQTKDLGDLGKLVN 212

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVPVP +KGDLGSSN GRESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 213 FSQVPVP-VKGDLGSSNRGRESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 272

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAG SKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 273 TSGFGNAGLSAGLSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 332

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNK APRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 333 NSNKRKGRDGEESECQSETAELESAEGNKAAPRSGSSRRTRAAEVHNLSERRRRERINEK 392

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 393 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 426

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A0A0KZR2 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G615240 PE=4 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 2.66e-183
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 131 RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 190

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 191 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 250

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 251 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 310

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 311 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 370

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 371 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A1S3CMJ5 (transcription factor PIF4-like OS=Cucumis melo OX=3656 GN=LOC103502508 PE=4 SV=1)

HSP 1 Score: 505 bits (1301), Expect = 5.90e-175
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDT+THVTFGN VKK+SKPPA+LAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 131 RFGAFDTSTHVTFGNSVKKSSKPPAALAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 190

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVP PPLKGDLGSSNGG+ESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 191 FSQVPAPPLKGDLGSSNGGKESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 250

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGF NAGLSAG SKEDNRK+VAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 251 TSGFRNAGLSAGLSKEDNRKLVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 310

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 311 NSNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 370

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 371 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 406

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A5D3DXW5 (Transcription factor PIF4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003560 PE=4 SV=1)

HSP 1 Score: 505 bits (1301), Expect = 5.73e-174
Identity = 265/276 (96.01%), Postives = 270/276 (97.83%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFGAFDT+THVTFGN VKK+SKPPA+LAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN
Sbjct: 153 RFGAFDTSTHVTFGNSVKKSSKPPAALAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 212

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
           FSQVP PPLKGDLGSSNGG+ESGNLIQGEGRDCS MTVGSSHCGSNQVPNPNDLDLSRVS
Sbjct: 213 FSQVPAPPLKGDLGSSNGGKESGNLIQGEGRDCSAMTVGSSHCGSNQVPNPNDLDLSRVS 272

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGF NAGLSAG SKEDNRK+VAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG
Sbjct: 273 TSGFRNAGLSAGLSKEDNRKLVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 332

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK
Sbjct: 333 NSNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 392

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 393 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 428

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A6J1CKT0 (transcription factor PIF4-like OS=Momordica charantia OX=3673 GN=LOC111012049 PE=4 SV=1)

HSP 1 Score: 451 bits (1161), Expect = 1.11e-153
Identity = 244/277 (88.09%), Postives = 254/277 (91.70%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSK-PPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLV 110
           RFGAFD  THV+FGN  + +SK P A+LAEFP NTMPPPRFQ  +S++Q KD GDLGK+V
Sbjct: 133 RFGAFDNTTHVSFGNSQRPSSKHPAAALAEFPTNTMPPPRFQLPNSTQQTKDFGDLGKIV 192

Query: 111 NFSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRV 170
           NFSQVPVP LKGDLGSSNGGRESGNLIQGEGRDCS MTVGSSHCGSNQVPN ND D SRV
Sbjct: 193 NFSQVPVP-LKGDLGSSNGGRESGNLIQGEGRDCSAMTVGSSHCGSNQVPNSNDPDASRV 252

Query: 171 STSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTG 230
           STSGFGNAGLSAG SKED+RKMV QGER KTETMDPT+TSSSGGSGSSMDRSRTIGQS G
Sbjct: 253 STSGFGNAGLSAGLSKEDHRKMVPQGERGKTETMDPTSTSSSGGSGSSMDRSRTIGQSNG 312

Query: 231 GNGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINE 290
           GN NKRKGRDGEESECQSETAELESAEGNK APRSGSSRRTRAAEVHNLSERRRRERINE
Sbjct: 313 GNRNKRKGRDGEESECQSETAELESAEGNKAAPRSGSSRRTRAAEVHNLSERRRRERINE 372

Query: 291 KMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           KMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 373 KMKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 408

[Close]

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL
Match: A0A6J1FPI6 (transcription factor PIF4-like OS=Cucurbita moschata OX=3662 GN=LOC111445806 PE=4 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 1.64e-142
Identity = 233/276 (84.42%), Postives = 241/276 (87.32%), Query Frame = 0


Query: 51  RFGAFDTATHVTFGNFVKKNSKPPASLAEFPMNTMPPPRFQFQDSSRQNKDLGDLGKLVN 110
           RFG FDT             SK P  LAEF  N+MPPPRFQ  DS+R NKDLGDLG++VN
Sbjct: 129 RFGVFDTT------------SKHPTGLAEFLTNSMPPPRFQCPDSTRSNKDLGDLGEMVN 188

Query: 111 FSQVPVPPLKGDLGSSNGGRESGNLIQGEGRDCSGMTVGSSHCGSNQVPNPNDLDLSRVS 170
            S+V VP LKGDLGSSNGGRE GNLIQ EGRDCS MTVGSSHCGSNQVPNPNDLD+SRVS
Sbjct: 189 SSRVCVP-LKGDLGSSNGGRECGNLIQVEGRDCSAMTVGSSHCGSNQVPNPNDLDVSRVS 248

Query: 171 TSGFGNAGLSAGFSKEDNRKMVAQGERDKTETMDPTATSSSGGSGSSMDRSRTIGQSTGG 230
           TSGFGNAGLSAG SKEDNRKMV Q ERDKTETMDPT TSSSGGSGSSMDR+RTIGQSTGG
Sbjct: 249 TSGFGNAGLSAGLSKEDNRKMVPQSERDKTETMDPTTTSSSGGSGSSMDRNRTIGQSTGG 308

Query: 231 NGNKRKGRDGEESECQSETAELESAEGNKTAPRSGSSRRTRAAEVHNLSERRRRERINEK 290
           N NKRKGRD EESECQSETAELESAEGN+TAPRSGSSRRTR AEVHNLSERRRRERINEK
Sbjct: 309 NSNKRKGRDREESECQSETAELESAEGNRTAPRSGSSRRTRVAEVHNLSERRRRERINEK 368

Query: 291 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 326
           MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV
Sbjct: 369 MKALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQV 391

The following BLAST results are available for this feature:

BLAST of Cucsat.G9025.T9 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10CH5	4.3e-29	64.34	Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 OS=Oryza sativa subs...	[more]
Q8W2F3	5.6e-29	48.17	Transcription factor PIF4 OS=Arabidopsis thaliana OX=3702 GN=PIF4 PE=1 SV=1	[more]
Q84LH8	1.3e-25	50.00	Transcription factor PIF5 OS=Arabidopsis thaliana OX=3702 GN=PIF5 PE=1 SV=1	[more]
O80536	1.3e-22	51.97	Transcription factor PIF3 OS=Arabidopsis thaliana OX=3702 GN=PIF3 PE=1 SV=1	[more]
Q8GZM7	6.2e-20	38.03	Transcription factor PIF1 OS=Arabidopsis thaliana OX=3702 GN=PIF1 PE=1 SV=1	[more]

BLAST of Cucsat.G9025.T9 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653988.1	5.49e-183	100.00	transcription factor PIF5 [Cucumis sativus] >XP_011653989.1 transcription factor...	[more]
XP_008464685.1	1.22e-174	96.01	PREDICTED: transcription factor PIF4-like [Cucumis melo] >XP_008464686.1 PREDICT...	[more]
KAA0032908.1	1.18e-173	96.01	transcription factor PIF4-like [Cucumis melo var. makuwa] >TYK28090.1 transcript...	[more]
XP_038897580.1	6.61e-167	94.93	transcription factor PIF4-like isoform X2 [Benincasa hispida] >XP_038897581.1 tr...	[more]
XP_038897579.1	1.28e-166	94.93	transcription factor PIF4-like isoform X1 [Benincasa hispida]	[more]

BLAST of Cucsat.G9025.T9 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZR2	2.66e-183	100.00	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G615240 PE=4 S...	[more]
A0A1S3CMJ5	5.90e-175	96.01	transcription factor PIF4-like OS=Cucumis melo OX=3656 GN=LOC103502508 PE=4 SV=1	[more]
A0A5D3DXW5	5.73e-174	96.01	Transcription factor PIF4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1CKT0	1.11e-153	88.09	transcription factor PIF4-like OS=Momordica charantia OX=3673 GN=LOC111012049 PE...	[more]
A0A6J1FPI6	1.64e-142	84.42	transcription factor PIF4-like OS=Cucurbita moschata OX=3662 GN=LOC111445806 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 238..258
None	No IPR available	COILS	Coil	Coil	coord: 277..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..203
None	No IPR available	PANTHER	PTHR45855:SF36	TRANSCRIPTION FACTOR PIF5	coord: 61..326
None	No IPR available	CDD	cd11445	bHLH_AtPIF_like	coord: 271..326 e-value: 3.51021E-28 score: 102.065
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 277..326 e-value: 1.2E-18 score: 78.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 275..321 e-value: 2.5E-14 score: 53.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 271..320 score: 18.590279
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 266..326 e-value: 5.1E-22 score: 79.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 268..325
IPR031066	Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant	PANTHER	PTHR45855	TRANSCRIPTION FACTOR PIF1-RELATED	coord: 61..326

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G9025	Cucsat.G9025	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9025.T9.E1	Cucsat.G9025.T9.E1	exon
Cucsat.G9025.T9.E2	Cucsat.G9025.T9.E2	exon
Cucsat.G9025.T9.E3	Cucsat.G9025.T9.E3	exon
Cucsat.G9025.T9.E4	Cucsat.G9025.T9.E4	exon
Cucsat.G9025.T9.E5	Cucsat.G9025.T9.E5	exon
Cucsat.G9025.T9.E6	Cucsat.G9025.T9.E6	exon
Cucsat.G9025.T9.E7	Cucsat.G9025.T9.E7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9025.T9.C1	Cucsat.G9025.T9.C1	CDS
Cucsat.G9025.T9.C2	Cucsat.G9025.T9.C2	CDS
Cucsat.G9025.T9.C3	Cucsat.G9025.T9.C3	CDS
Cucsat.G9025.T9.C4	Cucsat.G9025.T9.C4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G9025.T9	Cucsat.G9025.T9-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046983	protein dimerization activity