Cucsat.G7817.T5 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAACCATTCATGTTCTTCTCCTTCTACTCTGGTGCATATCATCGGTCGTCTGATGCCGTTCGTGGGTGACCTAAAAGATCTGAACTAAGAGCCAAAGCTACACTGATTACTTCTCTAAGGAAAAAACTACCCCCTAATCTTCTTCCTCCAAGTTTTCCCATGATTTTCGACCCAAATAGTATGCAATTTGGCGGTTAACTGTTCTTTGTTTATTCCAGTTCTTTTCTTTTCTTTAAATACGTGAATTAGGGTTGAATTAAGCGACCGCTTACTTAGTCGAATCTTTGATGATGGCACGTAGAGATCACGATGAATTAGTACATGATAGAAAAACACGTTTAAGATTTTGCCAAAATTTTAAGTAGAGAGCTAGGTAAGGATGAATTAGCTTAGGTGAAACTTTGTGATCATCTTATGATTGGTACAATGGTTACAATTTTACTTGTTTCCAATTCAGTCTCCTATTTTCTGAACTGAGTTAGAGGAAGTGGATGAATATTCAACAGTAGCATTACAAATGTATTTGTTTCGATAGCCCATATGATTTTTTTTCCTTTTGGGTAGGTTCTGTTTTGCAATCTGAACGGACTTTATATAAAGGGTCGGTGCTTCATTGTGATTTCTTTTTCTTCAGTTGCTGCTAAAATAATTTTGGTGGAAGGAAAGAGACGAATGGATGTCGAAGGGTTTGAAGAGTAAATGTCAATCTACTTCTCATCAGCTTTTGAAGGAAAGAGCAAAGAATTGTGTTAATGACCTTAAAGGGATATTCACTAATCTTCAAAATGCAAGGAAGGAGAGTCGTACTACTGACATTACTATCTTGGAGGAGCGAGTCCATCATATGCTCAGGGAGTGGAATGTTGAGCTTAATGAACCTTCACCTGCATCTTCATTTGTCGTAAGTTTTTTTTTTCAACTTTCTTTCCCCTTTGCCAAGGATGGTTTTGTCTTCCATCACTTTTGTGTAATCTAAATGTCTGTAAACATTCAATCAGTAGTGTAGTCTTGGATCATTCTCACAAGAGTTAGCCCATCTTCTTGGGCATTGTGATGAGCAAGATGATGCAACTAGTACATTTGTTGAACCAAAGGCTAAACCTGAACTCCGTTGCATGCGTTCTTGGTAGCAATCCGTTAAATTTTGTACAAGTAGGCTTTTTCTTCATTTTCTTTTTTAGTCTAACTCCATCTTTCAACGGGTGAATAATGTGTTCACTAGCCTTCCTTATTCACAAATTCTCTACATATAATCAGTCTAATCCAGCTTCTAAGGTAAAGGATAAATGGAAAAGTATTGCCAATTAAAAACAATGCACAAAGCTTCTTAACCATTTAACAAAGTTCTATTAATTGCACTTGAGACATAATCTTGTAGTGTTTTCTATTTTATGTCATTTGCTGGAAACTGGCTGGTTTCTCTTGGGATCCATGTCTACAAGCCCAACTTCTTAAAACATGTGACTTTTTCTATTGGATTAGTTGTTGTTTGCCTCTTATTTGTGATGACAGTATCTGCATAACAGTTGTGAGAATTGAGGCTTATCAATTAATCCAGCCTGATTTTTTTATTTTTTTTGTCATTATGGTATATGTGCTTCTATTGTTGTTGTTTGTGATTTTCTGATATTACATTTCTTGATGAGGAGACAATCAGGGAAGAACTCTACTTCGACAAGCCTAGATGGGCCTTTTAAGAGTGACAATCGAAAGCAAAGGTCATTACCCGATTATAATGGCCGTGGTTGGCATGAATCAAGGAAGCTAGTGATGGAGTTTGGTGGTCAGAAGAAGTCTTACATGGATCCACAAGCATCAATCGGTGTTTTAGCCATCTGCATTATTTCCATATCATAGAAACACAACCTTTGGGTTGACTACATTTTATCCATATTCCATGAACTAGAAAAGTAATTTGCACAACAATTGGTGGATTGATGAATTCAGTGGCTCGTTATGTTGTTTTACCACATGAAAATGGTCATTGTAGTTTTACTATTCGATTGAGTAACATATTAGTGGGGAAAGGAATTGTAAGCTTTAATATTTAATATTACAATATATCTACATTAGGTGTACATATAACCATCTTCCACCAGTAGTTTCTAATAATCCATAGCACTAAATAATTTTTAGTTTTTCTTTTATACTTTCAATGGAATAAAATTATAAGGCACATTATTC ATGACCTTAAAGGGATATTCACTAATCTTCAAAATGCAAGGAAGGAGAGTCGTACTACTGACATTACTATCTTGGAGGAGCGAGTCCATCATATGCTCAGGGAGTGGAATGTTGAGCTTAATGAACCTTCACCTGCATCTTCATTTGTCACAATCAGGGAAGAACTCTACTTCGACAAGCCTAGATGGGCCTTTTAAGAGTGACAATCGAAAGCAAAGGTCATTACCCGATTATAATGGCCGTGGTTGGCATGAATCAAGGAAGCTAGTGATGGAGTTTGGTGGTCAGAAGAAGTCTTACATGGATCCACAAGCATCAATCGGTGTTTTAGCCATCTGCATTATTTCCATATCATAG MTLKGYSLIFKMQGRRVVLLTLLSWRSESIICSGSGMLSLMNLHLHLHLSQSGKNSTSTSLDGPFKSDNRKQRSLPDYNGRGWHESRKLVMEFGGQKKSYMDPQASIGVLAICIISIS Homology
BLAST of Cucsat.G7817.T5 vs. ExPASy Swiss-Prot
Match: Q9SGQ0 (Transcription factor VOZ1 OS=Arabidopsis thaliana OX=3702 GN=VOZ1 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.3e-11 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. ExPASy Swiss-Prot
Match: Q9SLB9 (Transcription factor VOZ2 OS=Arabidopsis thaliana OX=3702 GN=VOZ2 PE=1 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 1.5e-08 Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. NCBI nr
Match: XP_011649982.2 (transcription factor VOZ1 [Cucumis sativus] >XP_011649983.2 transcription factor VOZ1 [Cucumis sativus] >XP_031736625.1 transcription factor VOZ1 [Cucumis sativus] >XP_031736626.1 transcription factor VOZ1 [Cucumis sativus] >KAE8652275.1 hypothetical protein Csa_021797 [Cucumis sativus]) HSP 1 Score: 76.3 bits (186), Expect = 2.50e-13 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. NCBI nr
Match: XP_008455940.1 (PREDICTED: transcription factor VOZ1-like [Cucumis melo] >TYK09550.1 transcription factor VOZ1-like [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 2.51e-13 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. NCBI nr
Match: KAA0067448.1 (transcription factor VOZ1-like [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 2.51e-13 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. NCBI nr
Match: KAG6570910.1 (Transcription factor VOZ1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 75.9 bits (185), Expect = 3.49e-13 Identity = 38/44 (86.36%), Postives = 39/44 (88.64%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. NCBI nr
Match: XP_022140419.1 (transcription factor VOZ1-like [Momordica charantia]) HSP 1 Score: 75.9 bits (185), Expect = 3.49e-13 Identity = 38/44 (86.36%), Postives = 39/44 (88.64%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. ExPASy TrEMBL
Match: A0A0A0L207 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G410800 PE=4 SV=1) HSP 1 Score: 109 bits (273), Expect = 2.53e-29 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. ExPASy TrEMBL
Match: A0A0A0LT50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G415530 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.17e-13 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. ExPASy TrEMBL
Match: A0A5D3CDY9 (Transcription factor VOZ1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00330 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.21e-13 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. ExPASy TrEMBL
Match: A0A5A7VI89 (Transcription factor VOZ1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40G001130 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.21e-13 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
BLAST of Cucsat.G7817.T5 vs. ExPASy TrEMBL
Match: A0A1S3C2S3 (transcription factor VOZ1-like OS=Cucumis melo OX=3656 GN=LOC103496002 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.21e-13 Identity = 38/44 (86.36%), Postives = 40/44 (90.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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