Cucsat.G6811.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATTAGGCCATTCTTAGCAAACATTCTACCTCTACCGCCATATTACGCGTCGCTCTGAAGGTCCATTTCTCTTGCTCTCTTCATACCCTTCAATACACCTCTGTGCAGCTCTCAGAGGTAATCCCAATCTTCCGAATCTCGATCTGCTTGTTTCTGAGTTACACTTCTTCAGATAATAGCGATAGATTCGTTCCATTCCGTTTTTGTGTTTCTCCCTCTCTCTACTGTTGATCTTACGTCGGAGTAAGATACTTCTGATATGTTTCCATCGGTTCTTATGATGTTTAAATCGTTTTTTTTTATAAGAATTTCGACCACTTTTACTTCTGTTGAAGGATTTCTTTTTCGATTTCGAACTTCTTGACGTGTTTGGCGGATCTATGGTTCCGATCTGTTTTGTTTGGGCCTTGATTGTTTGCTTCTCATAGATCCTGGTAATAAAATGTTAGTTACTTAAAGGTACTGTATGAGTCAACCGGTGCTTCGGATGATCACAATAGCGATCTCACTTTGTCACATGCATTATGTCGTTCATTTACTCGCTTTCTTCTCCGTGCAATTAAGGGCATGGTAAAACTTCTCTGGATTTCTTATGCTGCCTCTTTTTTACTGTAGATTTAAACTTACTTTTTCGAATTATCAGTGTTCTAAATAATTTCACCGATCGTGCGGTTTCGTAATCATTGACATTTCTCTTTGAGTATAATACTTTTGCTTTAGCAGGAACTTCCGCGTTACGAACAGAGATGGGGCTCACCTTCGGAAAGCTCTTCAGTCGGCTGTTTGCTAAAAAAGAGATGAGAATTCTGATGGTTGGTCTTGATGCCGCTGGTAAGACGACCATTCTCTATAAACTCAAGCTTGGAGAGATCGTTACAACTATTCCTACCATCGGTATTATCCCTCCCTTCCTTTCATTCTTTGTGTGTAATCCTGTTTTTACGCAACTTAATAGGTTGTGTAATCATTCCAGAGGAGCTACTAGGCTCAGTATGTTTTTCATTGATGTGGTTGGATTCCATGACAAGTCATTTGAAATTATAATTGGTTTTTATCTTTATTTGCAGGGTTTAACGTGGAGACTGTGGAATATAAGAACATCAGCTTCACTGTCTGGGATGTCGGTGGTCAGGACAAAGTATGAAATTACAATATTTTTTTTTTTTTTATCTTTTGTTAGCTGTGTACAAGCTTTTCGATGCATTTTTCTATCTCTAGTATAATCCATTCATGAACAACTGTTGTTTTTGCACAACCAAAAAAATGAAATTTGTCTTTCCACAGATTCGTCCATTGTGGAGGCACTATTTCCAGAACACTCAAGGTCTTATATTTGTGGTGGACAGTAACGATAGAGACCGTGTTGTTGAGGCAAGAGATGAGTTGCATAGAATGTTGAATGAGGTGTGCTGAATGTCTGCATCATTCATTAACTTTAATTGTTGGAATTGTAGATTTCATGCTATCCACTTTGTCAATAGACTTATCAAGTTTAGTGTTAAATACGACAATTTGAACTTTAGTGGCTAGATGTGATTATATTTATTGCAATGCCAGACGTATGAAATTCTTTTTTTTTTTCCCTGTCCAGTGAAAACCAGACAATAATGGTTTGTACATAATTATAGCGAATAGTTGTGCTTCTTTGTGCTTTGTAGGTTTTTTCTTCTAATAATCTATGGGATAGATAATTTATAATTCAAGATGACTGTGAGGAGGTCACAATTCTCTAATGCCTCTTAGACGACATTGGTTAGAAGTTAGAACTACGCTTAGTACTTAATGATACTTAAAGAAGGATCGAGCAAGGGTAATAGCACCTGAAATTTGTTGGCATTTGATTAAAGATACTAACATTTCATGCAGCTTGGACTGCCACCCCATTTCCAGCCAGACAAGTCATTCCTTTATATTTCTCCCGATCATTTATTTTACTCGTTTGCTCCTTGAATTGAATTGGTCAATTATTTTATTGGGTTAAATACATATATGTTAAGATTGAATTGCGACTGAAGCTTTTTTATTTTTTTCCACCGACTACAGGATGAGCTTCGAGATGCAGTACTACTAGTGTTTGCTAATAAACAAGATCTTCCCAATGCAATGAATGCCGCTGAGATTACAGACAAGCTTGGTCTTCACTCTCTTCGGCAGCGCCACTGGTAATCTTTGTGTTCTTCCATACATTACCACTTTTGCTTCATGCAATACTGTTCTAAAGTCGGATGAACGTCTGTGATGTTTATAGGTATATCCAGAGCACTTGTGCGACCTCCGGGGAAGGGCTTTATGAGGGATTAGATTGGCTTTCGAACAACATTGCTAACAAGGTACGTGCGCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCGTCTCCTTTGGTACTCAGCCTTTTCCTATGGGTTTTATTATTATAATTTTGTTACTCTTTTTCCTTTTTAATATTTAATTGAGATTAAGAAAAGCATACTGGTATTGGAAGGGAAATTGAGTTTTCTTCAAGGACCGGATAACATTTTTAAGAAAATGTCGAAAGCTTTCTATACTTAAAGTTAAATCACAAAATTAATAGTGAATAAAAGAAAATTAGTAAGGGATAAAATTGGTGAAAATATTTACCAAATATAGCAAATTTTCAAATTTTATTAATAGTAACATCTATAGACATGGGTATCTATTATTGTCCATCTTGGTAGAATTTTTTTTTTTTTTTTAAATATTTTAATTCATTATGGTATATTTGAAAAAGCTCCAAAATAAAAAGGTTAATAGCTTTTAAATTTTTTTATTTGTGTTGAAAGGATTCTTGAACCTTGAAAGAGTATATAGTAATAGTAAGTTTGTAAACCTTTAAGATATAGATAACTTGATTTTGTAATTATCAACTTTCTAAGGTTAAATTGTGTGGAACGATTAACTTTTGAAGTTTACAAAATAATAGACAAAATTGAACATTTTGTCTCATAAGATATGCAAGTTTAGAACAGGTAGGTTTGTAAATTTTAAATAAATGCTAAATAAGTCAGACCTATTTGACACAAAAGTGAAAGCTAAAAAAGTTTTATTAAACATTTAATCAAATTGTAAACATTTATCAAATATTTCAGATCGATTAAATAGATTTAAGAGTATAGAGAAGTTTATGGATTGAACTTCATCACTTAAACCTAAAAGTAAAGAACAATATGGTTTCAAGTATTTAGCCTTTTGAAATTTAGTTACTGTGATTCTGCATTCTCCTCAGTTTAAATCAGAGAAACTTCAAACGAATTTATATTGTAATTGAAGAAGAAACATGGACAAACATTATTGTAACTTTTCTTATCTTACTATTGTTTTATATCTTTAAAAAAAAATTATATCTATAATTATACACTGAATGGTCTAAATAGTAAAAAAGACTCAATGCATCTAAAGAACACTAAAAAGGTAATGAGTTGCGATTAATTTGAATTTATGTGTGGTAGTTGTTGAACACTGACATATGTGTTGAATGTTGTGTGTGCAATGCAGGCGTAAAAGCTGTTAAAAGAGTTGTCTTATCGACTGGCAATCCTGGATGCAGGGGTGAACGTTATCTACTTTTTCTTGTTTAGTATTTCTTGCCTTTTCTTTAGGGATTGATCTTTCGTAGTGTGGATCTACAGTCATAATTGTAATGGTTGTTCGTGTACTCATCTGGGCTTGTGTGTGTTTAATGAGCTGATGTAATTCAAAATTTAACCCCTCACTTCTTCATCTGAAATTCATTTTATCCTTGCATTCTTTTGAAAAATATCTACCTCATCTTGCCTTAAAGTGGCCACAACATGAAGTTCTCTTTTCACCTAAAGTATGAGTTTCATTTTTATTCAACACAAAGTTTATACTTA ATGGGGCTCACCTTCGGAAAGCTCTTCAGTCGGCTGTTTGCTAAAAAAGAGATGAGAATTCTGATGGTTGGTCTTGATGCCGCTGGTAAGACGACCATTCTCTATAAACTCAAGCTTGGAGAGATCGTTACAACTATTCCTACCATCGGGTTTAACGTGGAGACTGTGGAATATAAGAACATCAGCTTCACTGTCTGGGATGTCGGTGGTCAGGACAAAATTCGTCCATTGTGGAGGCACTATTTCCAGAACACTCAAGGTCTTATATTTGTGGTGGACAGTAACGATAGAGACCGTGTTGTTGAGGCAAGAGATGAGTTGCATAGAATGTTGAATGAGGATGAGCTTCGAGATGCAGTACTACTAGTGTTTGCTAATAAACAAGATCTTCCCAATGCAATGAATGCCGCTGAGATTACAGACAAGCTTGGTCTTCACTCTCTTCGGCAGCGCCACTGGTATATCCAGAGCACTTGTGCGACCTCCGGGGAAGGGCTTTATGAGGGATTAGATTGGCTTTCGAACAACATTGCTAACAAGGCGTAA MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA Homology
BLAST of Cucsat.G6811.T3 vs. ExPASy Swiss-Prot
Match: P36397 (ADP-ribosylation factor 1 OS=Arabidopsis thaliana OX=3702 GN=ARF1 PE=1 SV=2) HSP 1 Score: 364.8 bits (935), Expect = 5.8e-100 Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. ExPASy Swiss-Prot
Match: P51823 (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2) HSP 1 Score: 363.6 bits (932), Expect = 1.3e-99 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. ExPASy Swiss-Prot
Match: Q9LQC8 (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2) HSP 1 Score: 362.1 bits (928), Expect = 3.7e-99 Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. ExPASy Swiss-Prot
Match: P0DH91 (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana OX=3702 GN=ARF2-B PE=2 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 3.7e-99 Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. ExPASy Swiss-Prot
Match: Q06396 (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0813400 PE=2 SV=3) HSP 1 Score: 361.7 bits (927), Expect = 4.9e-99 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. NCBI nr
Match: XP_011649481.1 (ADP-ribosylation factor 1 [Cucumis sativus] >XP_011649482.1 ADP-ribosylation factor 1 [Cucumis sativus] >XP_022962329.1 ADP-ribosylation factor 1 [Cucurbita moschata] >XP_022962330.1 ADP-ribosylation factor 1 [Cucurbita moschata] >XP_022996893.1 ADP-ribosylation factor 1 [Cucurbita maxima] >XP_023545215.1 ADP-ribosylation factor 1 [Cucurbita pepo subsp. pepo] >XP_023545216.1 ADP-ribosylation factor 1 [Cucurbita pepo subsp. pepo] >KAE8652036.1 hypothetical protein Csa_018709 [Cucumis sativus]) HSP 1 Score: 364 bits (934), Expect = 6.54e-127 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. NCBI nr
Match: XP_006291918.1 (ADP-ribosylation factor 1 [Capsella rubella] >XP_006295602.1 ADP-ribosylation factor 1 [Capsella rubella] >XP_006296139.2 ADP-ribosylation factor 1 [Capsella rubella] >XP_006397909.1 ADP-ribosylation factor 1 [Eutrema salsugineum] >XP_006402389.1 ADP-ribosylation factor 1 [Eutrema salsugineum] >XP_006402390.1 ADP-ribosylation factor 1 [Eutrema salsugineum] >XP_009599611.1 ADP-ribosylation factor 1 [Nicotiana tomentosiformis] >XP_009599612.1 ADP-ribosylation factor 1 [Nicotiana tomentosiformis] >XP_010413292.1 PREDICTED: ADP-ribosylation factor 1 [Camelina sativa] >XP_010468970.1 PREDICTED: ADP-ribosylation factor 1 [Camelina sativa] >XP_010506745.1 PREDICTED: ADP-ribosylation factor 1 [Camelina sativa] >XP_010507921.1 PREDICTED: ADP-ribosylation factor 1 [Camelina sativa] >XP_010512616.1 PREDICTED: ADP-ribosylation factor 1 [Camelina sativa] >XP_010518410.1 PREDICTED: ADP-ribosylation factor 1 [Camelina sativa] >XP_010544949.1 PREDICTED: ADP-ribosylation factor 1 [Tarenaya hassleriana] >XP_013636373.1 PREDICTED: ADP-ribosylation factor 1 [Brassica oleracea var. oleracea] >XP_013741892.1 ADP-ribosylation factor 1 [Brassica napus] >XP_016471936.1 PREDICTED: ADP-ribosylation factor 1 [Nicotiana tabacum] >XP_016471937.1 PREDICTED: ADP-ribosylation factor 1 [Nicotiana tabacum] >XP_016539824.1 PREDICTED: ADP-ribosylation factor 1 [Capsicum annuum] >XP_018485312.1 PREDICTED: ADP-ribosylation factor 1 [Raphanus sativus] >XP_018485313.1 PREDICTED: ADP-ribosylation factor 1 [Raphanus sativus] >XP_020551739.1 ADP-ribosylation factor 1 isoform X1 [Sesamum indicum] >XP_020551740.1 ADP-ribosylation factor 1 isoform X2 [Sesamum indicum] >XP_020865876.1 ADP-ribosylation factor 1 [Arabidopsis lyrata subsp. lyrata] >XP_020882227.1 ADP-ribosylation factor 1 [Arabidopsis lyrata subsp. lyrata] >XP_026391776.1 ADP-ribosylation factor 1 [Papaver somniferum] >XP_026399161.1 ADP-ribosylation factor 1 [Papaver somniferum] >XP_028779500.1 ADP-ribosylation factor 1 [Prosopis alba] >XP_038995830.1 ADP-ribosylation factor 1 [Hibiscus syriacus] >XP_038995831.1 ADP-ribosylation factor 1 [Hibiscus syriacus] >XP_039048227.1 ADP-ribosylation factor 1 isoform X2 [Hibiscus syriacus] >AAR03592.1 ARF-like small GTPase [Brassica juncea] >KAF8049872.1 hypothetical protein N665_2105s0007 [Sinapis alba] >KAG2309712.1 hypothetical protein Bca52824_029460 [Brassica carinata] >KAG7561773.1 P-loop containing nucleoside triphosphate hydrolase [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7566691.1 P-loop containing nucleoside triphosphate hydrolase [Arabidopsis suecica] >PIN15550.1 GTP-binding ADP-ribosylation factor Arf1 [Handroanthus impetiginosus] >CAA7030543.1 unnamed protein product [Microthlaspi erraticum] >CAE6080350.1 unnamed protein product [Arabidopsis arenosa] >VVB03587.1 unnamed protein product [Arabis nemorensis]) HSP 1 Score: 362 bits (930), Expect = 2.66e-126 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. NCBI nr
Match: CAA7030542.1 (unnamed protein product [Microthlaspi erraticum] >CAA7054517.1 unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 362 bits (930), Expect = 3.29e-126 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. NCBI nr
Match: XP_008444322.1 (PREDICTED: ADP-ribosylation factor 2-like [Cucumis melo] >XP_008444323.1 PREDICTED: ADP-ribosylation factor 2-like [Cucumis melo] >XP_010551584.1 PREDICTED: ADP-ribosylation factor 2-like [Tarenaya hassleriana] >XP_022131882.1 ADP-ribosylation factor 2-like [Momordica charantia] >XP_022951204.1 ADP-ribosylation factor 2-like isoform X2 [Cucurbita moschata] >XP_022951205.1 ADP-ribosylation factor 2-like isoform X2 [Cucurbita moschata] >XP_023538142.1 ADP-ribosylation factor 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 362 bits (928), Expect = 5.37e-126 Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. NCBI nr
Match: XP_009391635.1 (PREDICTED: ADP-ribosylation factor 2 [Musa acuminata subsp. malaccensis] >CAG1849632.1 unnamed protein product [Musa acuminata subsp. malaccensis]) HSP 1 Score: 361 bits (927), Expect = 7.64e-126 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. ExPASy TrEMBL
Match: A0A6J1HGS2 (ADP-ribosylation factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111462809 PE=3 SV=1) HSP 1 Score: 364 bits (934), Expect = 3.16e-127 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. ExPASy TrEMBL
Match: A0A6J1KCB0 (ADP-ribosylation factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111491996 PE=3 SV=1) HSP 1 Score: 364 bits (934), Expect = 3.16e-127 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. ExPASy TrEMBL
Match: A0A565BQE0 (Uncharacterized protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS14031 PE=3 SV=1) HSP 1 Score: 362 bits (930), Expect = 1.29e-126 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. ExPASy TrEMBL
Match: A0A1J3FUS0 (ADP-ribosylation factor 1 OS=Noccaea caerulescens OX=107243 GN=LC_TR1283_c0_g1_i1_g.4339 PE=3 SV=1) HSP 1 Score: 362 bits (930), Expect = 1.29e-126 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. ExPASy TrEMBL
Match: R0FRI1 (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10018102mg PE=3 SV=1) HSP 1 Score: 362 bits (930), Expect = 1.29e-126 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. TAIR 10
Match: AT3G62290.1 (ADP-ribosylation factor A1E ) HSP 1 Score: 365.5 bits (937), Expect = 2.4e-101 Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. TAIR 10
Match: AT3G62290.2 (ADP-ribosylation factor A1E ) HSP 1 Score: 365.5 bits (937), Expect = 2.4e-101 Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. TAIR 10
Match: AT3G62290.3 (ADP-ribosylation factor A1E ) HSP 1 Score: 365.5 bits (937), Expect = 2.4e-101 Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. TAIR 10
Match: AT2G47170.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 364.8 bits (935), Expect = 4.1e-101 Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Cucsat.G6811.T3 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F ) HSP 1 Score: 362.5 bits (929), Expect = 2.0e-100 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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