Cucsat.G6811 (gene) Cucumber (B10) v3

Overview
NameCucsat.G6811
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionADP-ribosylation factor
Locationctg1522: 256698 .. 260585 (-)
RNA-Seq ExpressionCucsat.G6811
SyntenyCucsat.G6811
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTACCTCTACCGCCATATTACGCGTCGCTCTGAAGGTCCATTTCTCTTGCTCTCTTCATACCCTTCAATACACCTCTGTGCAGCTCTCAGAGGTAATCCCAATCTTCCGAATCTCGATCTGCTTGTTTCTGAGTTACACTTCTTCAGATAATAGCGATAGATTCGTTCCATTCCGTTTTTGTGTTTCTCCCTCTCTCTACTGTTGATCTTACGTCGGAGTAAGATACTTCTGATATGTTTCCATCGGTTCTTATGATGTTTAAATCGTTTTTTTTTATAAGAATTTCGACCACTTTTACTTCTGTTGAAGGATTTCTTTTTCGATTTCGAACTTCTTGACGTGTTTGGCGGATCTATGGTTCCGATCTGTTTTGTTTGGGCCTTGATTGTTTGCTTCTCATAGATCCTGGTAATAAAATGTTAGTTACTTAAAGGTACTGTATGAGTCAACCGGTGCTTCGGATGATCACAATAGCGATCTCACTTTGTCACATGCATTATGTCGTTCATTTACTCGCTTTCTTCTCCGTGCAATTAAGGGCATGGTAAAACTTCTCTGGATTTCTTATGCTGCCTCTTTTTTACTGTAGATTTAAACTTACTTTTTCGAATTATCAGTGTTCTAAATAATTTCACCGATCGTGCGGTTTCGTAATCATTGACATTTCTCTTTGAGTATAATACTTTTGCTTTAGCAGGAACTTCCGCGTTACGAACAGAGATGGGGCTCACCTTCGGAAAGCTCTTCAGTCGGCTGTTTGCTAAAAAAGAGATGAGAATTCTGATGGTTGGTCTTGATGCCGCTGGTAAGACGACCATTCTCTATAAACTCAAGCTTGGAGAGATCGTTACAACTATTCCTACCATCGGTATTATCCCTCCCTTCCTTTCATTCTTTGTGTGTAATCCTGTTTTTACGCAACTTAATAGGTTGTGTAATCATTCCAGAGGAGCTACTAGGCTCAGTATGTTTTTCATTGATGTGGTTGGATTCCATGACAAGTCATTTGAAATTATAATTGGTTTTTATCTTTATTTGCAGGGTTTAACGTGGAGACTGTGGAATATAAGAACATCAGCTTCACTGTCTGGGATGTCGGTGGTCAGGACAAAGTATGAAATTACAATATTTTTTTTTTTTTTATCTTTTGTTAGCTGTGTACAAGCTTTTCGATGCATTTTTCTATCTCTAGTATAATCCATTCATGAACAACTGTTGTTTTTGCACAACCAAAAAAATGAAATTTGTCTTTCCACAGATTCGTCCATTGTGGAGGCACTATTTCCAGAACACTCAAGGTCTTATATTTGTGGTGGACAGTAACGATAGAGACCGTGTTGTTGAGGCAAGAGATGAGTTGCATAGAATGTTGAATGAGGTGTGCTGAATGTCTGCATCATTCATTAACTTTAATTGTTGGAATTGTAGATTTCATGCTATCCACTTTGTCAATAGACTTATCAAGTTTAGTGTTAAATACGACAATTTGAACTTTAGTGGCTAGATGTGATTATATTTATTGCAATGCCAGACGTATGAAATTCTTTTTTTTTTTCCCTGTCCAGTGAAAACCAGACAATAATGGTTTGTACATAATTATAGCGAATAGTTGTGCTTCTTTGTGCTTTGTAGGTTTTTTCTTCTAATAATCTATGGGATAGATAATTTATAATTCAAGATGACTGTGAGGAGGTCACAATTCTCTAATGCCTCTTAGACGACATTGGTTAGAAGTTAGAACTACGCTTAGTACTTAATGATACTTAAAGAAGGATCGAGCAAGGGTAATAGCACCTGAAATTTGTTGGCATTTGATTAAAGATACTAACATTTCATGCAGCTTGGACTGCCACCCCATTTCCAGCCAGACAAGTCATTCCTTTATATTTCTCCCGATCATTTATTTTACTCGTTTGCTCCTTGAATTGAATTGGTCAATTATTTTATTGGGTTAAATACATATATGTTAAGATTGAATTGCGACTGAAGCTTTTTTATTTTTTTCCACCGACTACAGGATGAGCTTCGAGATGCAGTACTACTAGTGTTTGCTAATAAACAAGATCTTCCCAATGCAATGAATGCCGCTGAGATTACAGACAAGCTTGGTCTTCACTCTCTTCGGCAGCGCCACTGGTAATCTTTGTGTTCTTCCATACATTACCACTTTTGCTTCATGCAATACTGTTCTAAAGTCGGATGAACGTCTGTGATGTTTATAGGTATATCCAGAGCACTTGTGCGACCTCCGGGGAAGGGCTTTATGAGGGATTAGATTGGCTTTCGAACAACATTGCTAACAAGGTACGTGCGCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCGTCTCCTTTGGTACTCAGCCTTTTCCTATGGGTTTTATTATTATAATTTTGTTACTCTTTTTCCTTTTTAATATTTAATTGAGATTAAGAAAAGCATACTGGTATTGGAAGGGAAATTGAGTTTTCTTCAAGGACCGGATAACATTTTTAAGAAAATGTCGAAAGCTTTCTATACTTAAAGTTAAATCACAAAATTAATAGTGAATAAAAGAAAATTAGTAAGGGATAAAATTGGTGAAAATATTTACCAAATATAGCAAATTTTCAAATTTTATTAATAGTAACATCTATAGACATGGGTATCTATTATTGTCCATCTTGGTAGAATTTTTTTTTTTTTTTTAAATATTTTAATTCATTATGGTATATTTGAAAAAGCTCCAAAATAAAAAGGTTAATAGCTTTTAAATTTTTTTATTTGTGTTGAAAGGATTCTTGAACCTTGAAAGAGTATATAGTAATAGTAAGTTTGTAAACCTTTAAGATATAGATAACTTGATTTTGTAATTATCAACTTTCTAAGGTTAAATTGTGTGGAACGATTAACTTTTGAAGTTTACAAAATAATAGACAAAATTGAACATTTTGTCTCATAAGATATGCAAGTTTAGAACAGGTAGGTTTGTAAATTTTAAATAAATGCTAAATAAGTCAGACCTATTTGACACAAAAGTGAAAGCTAAAAAAGTTTTATTAAACATTTAATCAAATTGTAAACATTTATCAAATATTTCAGATCGATTAAATAGATTTAAGAGTATAGAGAAGTTTATGGATTGAACTTCATCACTTAAACCTAAAAGTAAAGAACAATATGGTTTCAAGTATTTAGCCTTTTGAAATTTAGTTACTGTGATTCTGCATTCTCCTCAGTTTAAATCAGAGAAACTTCAAACGAATTTATATTGTAATTGAAGAAGAAACATGGACAAACATTATTGTAACTTTTCTTATCTTACTATTGTTTTATATCTTTAAAAAAAAATTATATCTATAATTATACACTGAATGGTCTAAATAGTAAAAAAGACTCAATGCATCTAAAGAACACTAAAAAGGTAATGAGTTGCGATTAATTTGAATTTATGTGTGGTAGTTGTTGAACACTGACATATGTGTTGAATGTTGTGTGTGCAATGCAGGCGTAAAAGCTGTTAAAAGAGTTGTCTTATCGACTGGCAATCCTGGATGCAGGGGTGAACGTTATCTACTTTTTCTTGTTTAGTATTTCTTGCCTTTTCTTTAGGGATTGATCTTTCGTAGTGTGGATCTACAGTCATAATTGTAATGGTTGTTCGTGTACTCATCTGGGCTTGTGTGTGTTTAATGAGCTGATGTAATTCAAAATTTAACCCCTCACTTCTTCATCTGAAATTCATTTTATCCTTGCATTCTTTTGAAAAATATCTACCTCATCTTGCCTTAAAGTGGCCACAACATGAAGTTCTCTTTTCACCTAAAGTATGAGTTTCATTTTTATTCAACACAAAGTTTATACTTACAAATTCATTGGATCAAAATCATCCATGCAATATTCATTGTCATTGTCCACAACCTGTAATTTTTGGCGACCATCCTTAAACAAAAGATGGGCAACTTCTTTAATTCCTTGTGGCCTCTGATCATTCTTCTCTATCACTGAAATTATTTTTTTCTTTATAGTTTCTTCAACAACTTCGCCCCCTGATTGGTGAGGTTGCAATCCAAGAATTGCAAGGCATTCTTTTTTGAAATCCATGTCGTTGGAGTATAAAACTAGGCCAGCCATCGCTTTGGCTAAATCAGGGGCAAACCTACTGATCTGAAAATGAACATAGAAGTATGTTTAGGAAGTTACACTGAATTACTACGAGAAGCGTACAAGACAGTTTCATGAATAAACATGCAAAGAACTGATCATGAACACCTAAAATCTACAGAAAGCAAGCTCTTATCCTTTTGGCGTCAAAGCACTGGTCTTGGTGCATGGCAGGTCATTTTGATGGAAATCGGATGTGATAGTGAAATTA

Coding sequence (CDS)

ATGGGGCTCACCTTCGGAAAGCTCTTCAGTCGGCTGTTTGCTAAAAAAGAGATGAGAATTCTGATGGTTGGTCTTGATGCCGCTGGTAAGACGACCATTCTCTATAAACTCAAGCTTGGAGAGATCGTTACAACTATTCCTACCATCGGGTTTAACGTGGAGACTGTGGAATATAAGAACATCAGCTTCACTGTCTGGGATGTCGGTGGTCAGGACAAAATTCGTCCATTGTGGAGGCACTATTTCCAGAACACTCAAGGTCTTATATTTGTGGTGGACAGTAACGATAGAGACCGTGTTGTTGAGGCAAGAGATGAGTTGCATAGAATGTTGAATGAGGATGAGCTTCGAGATGCAGTACTACTAGTGTTTGCTAATAAACAAGATCTTCCCAATGCAATGAATGCCGCTGAGATTACAGACAAGCTTGGTCTTCACTCTCTTCGGCAGCGCCACTGGTATATCCAGAGCACTTGTGCGACCTCCGGGGAAGGGCTTTATGAGGGATTAGATTGGCTTTCGAACAACATTGCTAACAAGGCGTAA

Protein sequence

MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Homology
[Close]
BLAST of Cucsat.G6811 vs. ExPASy Swiss-Prot
Match: P36397 (ADP-ribosylation factor 1 OS=Arabidopsis thaliana OX=3702 GN=ARF1 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 4.3e-19
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGL+FGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]
BLAST of Cucsat.G6811 vs. ExPASy Swiss-Prot
Match: Q06396 (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGLTF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]
BLAST of Cucsat.G6811 vs. ExPASy Swiss-Prot
Match: P51823 (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGLTF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]
BLAST of Cucsat.G6811 vs. ExPASy Swiss-Prot
Match: P49076 (ADP-ribosylation factor OS=Zea mays OX=4577 GN=ARF1 PE=2 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGLTF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]
BLAST of Cucsat.G6811 vs. ExPASy Swiss-Prot
Match: Q9LQC8 (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGL+F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]
BLAST of Cucsat.G6811 vs. NCBI nr
Match: KAA0061085.1 (ADP-ribosylation factor 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 147 bits (371), Expect = 1.68e-40
Identity = 79/98 (80.61%), Postives = 85/98 (86.73%), Query Frame = 0 

Query: 38  MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV 97
           MGLTF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV
Sbjct: 1   MGLTFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV 60

Query: 98  CNPVFTQLNRLCNHSRGATRLSMFFIDVVGFHDKSFEI 135
            N VFT LNRL +HSRGATRL  F ++ V + + SF +
Sbjct: 61  YNSVFTLLNRLRSHSRGATRLR-FNVETVEYKNISFTV 97

[Close]
BLAST of Cucsat.G6811 vs. NCBI nr
Match: XP_038885435.1 (ADP-ribosylation factor 2-like [Benincasa hispida])

HSP 1 Score: 142 bits (358), Expect = 4.49e-38
Identity = 76/85 (89.41%), Postives = 76/85 (89.41%), Query Frame = 0 

Query: 3   RHITRRSEGPFLLLSSYPSIHLCAALRGTSALRTEMGLTFGKLFSRLFAKKEMRILMVGL 62
           RHITR SE  F LLSS  SIHLCAALRGTS LR EMGLTF KLFSRLFAKKEMRILMVGL
Sbjct: 38  RHITRCSEARFFLLSSSLSIHLCAALRGTSKLRAEMGLTFAKLFSRLFAKKEMRILMVGL 97

Query: 63  DAAGKTTILYKLKLGEIVTTIPTIG 87
           DAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 98  DAAGKTTILYKLKLGEIVTTIPTIG 122

[Close]
BLAST of Cucsat.G6811 vs. NCBI nr
Match: KAG6598215.1 (hypothetical protein SDJN03_07993, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133 bits (334), Expect = 7.19e-32
Identity = 74/90 (82.22%), Postives = 75/90 (83.33%), Query Frame = 0 

Query: 1   LYRHITRRSEGPFLLLSSYPSIHL---CAALRGTSALRTEMGLTFGKLFSRLFAKKEMRI 60
           L RHITR SE  F LLS   SIHL   C AL GT  LRT+MGLTFGKLFSRLFAKKEMRI
Sbjct: 810 LQRHITRCSEARFFLLSPSLSIHLWPLCVALGGTLTLRTDMGLTFGKLFSRLFAKKEMRI 869

Query: 61  LMVGLDAAGKTTILYKLKLGEIVTTIPTIG 87
           LMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 870 LMVGLDAAGKTTILYKLKLGEIVTTIPTIG 899

[Close]
BLAST of Cucsat.G6811 vs. NCBI nr
Match: KAF9597461.1 (hypothetical protein IFM89_018907 [Coptis chinensis])

HSP 1 Score: 120 bits (302), Expect = 2.03e-31
Identity = 78/168 (46.43%), Postives = 90/168 (53.57%), Query Frame = 0 

Query: 38  MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV 97
           MGLT  KLFSRLFAKKEMRIL+VG D AGKTTILYKLKLGEIVTTIPTIG          
Sbjct: 1   MGLTCTKLFSRLFAKKEMRILIVGFDVAGKTTILYKLKLGEIVTTIPTIG---------- 60

Query: 98  CNPVFTQLNRLCNHSRGATRLSMFFIDVVGFHDKSFEIIIGFYLYLQGLTWRLWNIRTSA 157
                                  F ++ V + + +F +               W++    
Sbjct: 61  -----------------------FNVETVEYKNINFTV---------------WDVG--- 110

Query: 158 SLSGMSVVRTKFVHCGGTISRTLKVLYLWWTVTIETVLLRQEMSCIEC 205
                  VRTK VHCGGT S+T +V YLWW   I+T LLRQ MSCIEC
Sbjct: 121 -------VRTKSVHCGGTTSKTRRVSYLWWIAMIKTELLRQGMSCIEC 110

[Close]
BLAST of Cucsat.G6811 vs. NCBI nr
Match: KAG6585161.1 (ADP-ribosylation factor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108 bits (269), Expect = 1.00e-24
Identity = 57/61 (93.44%), Postives = 57/61 (93.44%), Query Frame = 0 

Query: 27  ALRGTSALRTEMGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 86
           AL G S LRTEMGLTF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 75  ALSGNSPLRTEMGLTFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 134

[Close]
BLAST of Cucsat.G6811 vs. ExPASy TrEMBL
Match: A0A5A7V5J4 (ADP-ribosylation factor 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002260 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 8.12e-41
Identity = 79/98 (80.61%), Postives = 85/98 (86.73%), Query Frame = 0 

Query: 38  MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV 97
           MGLTF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV
Sbjct: 1   MGLTFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV 60

Query: 98  CNPVFTQLNRLCNHSRGATRLSMFFIDVVGFHDKSFEI 135
            N VFT LNRL +HSRGATRL  F ++ V + + SF +
Sbjct: 61  YNSVFTLLNRLRSHSRGATRLR-FNVETVEYKNISFTV 97

[Close]
BLAST of Cucsat.G6811 vs. ExPASy TrEMBL
Match: A0A453M7D5 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 7.47e-38
Identity = 89/168 (52.98%), Postives = 99/168 (58.93%), Query Frame = 0 

Query: 38  MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV 97
           MGLTF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI           
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIAE--------- 60

Query: 98  CNPVFTQLNRLCNHSRGATRLSMFFIDVVGFHDKSFEIIIGFYLYLQGLTWRLWNIRTSA 157
                                          H  +++  + F L +QG   +LW+ RTSA
Sbjct: 61  -------------------------------HASAWQCELSF-LRIQGSMLKLWSTRTSA 120

Query: 158 SLSGMSVVRTKFVHCGGTISRTLKVLYLWWTVTIETVLLRQEMSCIEC 205
           SLSGMS VRT+  HCGG  SRT +V  L WT TI TVLL+Q MS   C
Sbjct: 121 SLSGMSGVRTRSGHCGGITSRTHRVSSLLWTATIGTVLLKQGMSSTGC 127

[Close]
BLAST of Cucsat.G6811 vs. ExPASy TrEMBL
Match: A0A287SQR4 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)

HSP 1 Score: 134 bits (337), Expect = 8.79e-37
Identity = 90/168 (53.57%), Postives = 99/168 (58.93%), Query Frame = 0 

Query: 38  MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV 97
           MGLTF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI       + + 
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIA---EHANAWQ 60

Query: 98  CNPVFTQLNRLCNHSRGATRLSMFFIDVVGFHDKSFEIIIGFYLYLQGLTWRLWNIRTSA 157
           C+PV       C                               L +QG   +LW+ RTSA
Sbjct: 61  CDPV------SC-------------------------------LQIQGSMLKLWSTRTSA 120

Query: 158 SLSGMSVVRTKFVHCGGTISRTLKVLYLWWTVTIETVLLRQEMSCIEC 205
           SLSGMS VRT+  HCGG  SRT +V  L  T TI TVLL+Q MS   C
Sbjct: 121 SLSGMSGVRTRSGHCGGITSRTRRVSSLLLTATIGTVLLKQGMSSTGC 128

[Close]
BLAST of Cucsat.G6811 vs. ExPASy TrEMBL
Match: A0A453FRT7 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 1.47e-29
Identity = 86/168 (51.19%), Postives = 91/168 (54.17%), Query Frame = 0 

Query: 38  MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGIIPPFLSFFV 97
           MGLTF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG +        
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGKL-------- 60

Query: 98  CNPVFTQLNRLCNHSRGATRLSMFFIDVVGFHDKSFEIIIGFYLYLQGLTWRLWNIRTSA 157
                               LS F     G  D S              T +L N RTSA
Sbjct: 61  --------------------LSAFSASTSG--DVS-----------NDSTSKLLNTRTSA 120

Query: 158 SLSGMSVVRTKFVHCGGTISRTLKVLYLWWTVTIETVLLRQEMSCIEC 205
           SL GM   +T+   CGGT SR  K  +L  T  I  VLLR EMS  EC
Sbjct: 121 SLFGMWGAKTRSGPCGGTTSRIPKGSFLLLTAMIGNVLLRLEMSSTEC 127

[Close]
BLAST of Cucsat.G6811 vs. ExPASy TrEMBL
Match: A0A0A0LK50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348280 PE=3 SV=1)

HSP 1 Score: 110 bits (276), Expect = 2.56e-26
Identity = 60/64 (93.75%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 24  LCAALRGTSALRTEMGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI 83
           L  AL  TSALRTEMGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI
Sbjct: 86  LSHALCRTSALRTEMGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI 145

Query: 84  PTIG 87
           PTIG
Sbjct: 146 PTIG 149

[Close]
BLAST of Cucsat.G6811 vs. TAIR 10
Match: AT2G47170.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-20
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGL+FGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]
BLAST of Cucsat.G6811 vs. TAIR 10
Match: AT3G62290.1 (ADP-ribosylation factor A1E )

HSP 1 Score: 95.1 bits (235), Expect = 6.8e-20
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGL+FGKLFS+LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLSFGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]
BLAST of Cucsat.G6811 vs. TAIR 10
Match: AT3G62290.2 (ADP-ribosylation factor A1E )

HSP 1 Score: 95.1 bits (235), Expect = 6.8e-20
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGL+FGKLFS+LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLSFGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]
BLAST of Cucsat.G6811 vs. TAIR 10
Match: AT3G62290.3 (ADP-ribosylation factor A1E )

HSP 1 Score: 95.1 bits (235), Expect = 6.8e-20
Identity = 48/50 (96.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGL+FGKLFS+LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLSFGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

[Close]
BLAST of Cucsat.G6811 vs. TAIR 10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 48/50 (96.00%), Postives = 49/50 (98.00%), Query Frame = 0 

Query: 38 MGLTFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 88
          MGL+F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
Sbjct: 1  MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50

The following BLAST results are available for this feature:
BLAST of Cucsat.G6811 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P363974.3e-1998.00ADP-ribosylation factor 1 OS=Arabidopsis thaliana OX=3702 GN=ARF1 PE=1 SV=2[more]
Q063961.3e-1898.00ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g08134... [more]
P518231.3e-1898.00ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 S... [more]
P490761.3e-1898.00ADP-ribosylation factor OS=Zea mays OX=4577 GN=ARF1 PE=2 SV=2[more]
Q9LQC82.1e-1896.00ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2[more]
BLAST of Cucsat.G6811 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061085.11.68e-4080.61ADP-ribosylation factor 2-like [Cucumis melo var. makuwa][more]
XP_038885435.14.49e-3889.41ADP-ribosylation factor 2-like [Benincasa hispida][more]
KAG6598215.17.19e-3282.22hypothetical protein SDJN03_07993, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF9597461.12.03e-3146.43hypothetical protein IFM89_018907 [Coptis chinensis][more]
KAG6585161.11.00e-2493.44ADP-ribosylation factor 2, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Cucsat.G6811 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V5J48.12e-4180.61ADP-ribosylation factor 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A453M7D57.47e-3852.98Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S... [more]
A0A287SQR48.79e-3753.57Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1[more]
A0A453FRT71.47e-2951.19Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S... [more]
A0A0A0LK502.56e-2693.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348280 PE=3 SV=1[more]
BLAST of Cucsat.G6811 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G47170.13.1e-2098.00Ras-related small GTP-binding family protein [more]
AT3G62290.16.8e-2096.00ADP-ribosylation factor A1E [more]
AT3G62290.26.8e-2096.00ADP-ribosylation factor A1E [more]
AT3G62290.36.8e-2096.00ADP-ribosylation factor A1E [more]
AT1G70490.11.5e-1996.00Ras-related small GTP-binding family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 32..173
e-value: 6.2E-6
score: 33.1
NoneNo IPR availablePANTHERPTHR11711:SF336ADP-RIBOSYLATION FACTORcoord: 32..82
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 32..82
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 38..81
e-value: 5.7E-15
score: 55.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 33..128
e-value: 1.5E-15
score: 58.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 45..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G6811.T21Cucsat.G6811.T21mRNA
Cucsat.G6811.T11Cucsat.G6811.T11mRNA
Cucsat.G6811.T1Cucsat.G6811.T1mRNA
Cucsat.G6811.T5Cucsat.G6811.T5mRNA
Cucsat.G6811.T2Cucsat.G6811.T2mRNA
Cucsat.G6811.T12Cucsat.G6811.T12mRNA
Cucsat.G6811.T7Cucsat.G6811.T7mRNA
Cucsat.G6811.T8Cucsat.G6811.T8mRNA
Cucsat.G6811.T15Cucsat.G6811.T15mRNA
Cucsat.G6811.T4Cucsat.G6811.T4mRNA
Cucsat.G6811.T3Cucsat.G6811.T3mRNA
Cucsat.G6811.T17Cucsat.G6811.T17mRNA
Cucsat.G6811.T16Cucsat.G6811.T16mRNA
Cucsat.G6811.T19Cucsat.G6811.T19mRNA
Cucsat.G6811.T18Cucsat.G6811.T18mRNA
Cucsat.G6811.T9Cucsat.G6811.T9mRNA
Cucsat.G6811.T13Cucsat.G6811.T13mRNA
Cucsat.G6811.T24Cucsat.G6811.T24mRNA
Cucsat.G6811.T20Cucsat.G6811.T20mRNA
Cucsat.G6811.T23Cucsat.G6811.T23mRNA
Cucsat.G6811.T25Cucsat.G6811.T25mRNA
Cucsat.G6811.T26Cucsat.G6811.T26mRNA
Cucsat.G6811.T22Cucsat.G6811.T22mRNA
Cucsat.G6811.T10Cucsat.G6811.T10mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006886 intracellular protein transport
biological_process GO:0090354 regulation of auxin metabolic process
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0031001 response to brefeldin A
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0098876 vesicle-mediated transport to the plasma membrane
cellular_component GO:0005769 early endosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005802 trans-Golgi network
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003729 mRNA binding
molecular_function GO:0016004 phospholipase activator activity
molecular_function GO:0005515 protein binding