Cucsat.G5825.T10 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGTTCTGACGTTCTTTTGAAATGAAGATTGTTTGGTTGAATTGAAATTGTTTTTAGTCAGTTATTACTTAGTTTGCTCGTTTGGAGGAGTTGTTGAAGTTTGGAGATGGGAAATCAGAATTACTAGTGTCGAGTTGGAGTGATGATCAAACTTCTTTAATTTGTAGTTAACATTGTTGCTTCTTTTTCTTGCTTTTATTAAAACCATAAAAAAATTTCAAAATAGTATCACATAGAAAGTTAAATCAAACACCCACAAACTCTAATACGCTAAAGTCAATTATTCAAATAGAAACTAAATTTTAACTCGTAGGAACTATAGTGAAGCGTTTAATACCATGGAGACCAAATTCAATTTTTTTTGAAGTGAATATAGCTGTGCAAGCTGGGAATTTCCTCTTCATATCCGATTCAAAAATTTTCCAAACTACTAACTTTGTTGGAATTCCTTGAATTCATTAAGTGCTGCTACGGACAACAACGTACAGAAAATTAGGGGACAATACCCCGAAAAGCTTTTTAGTTTTAACGATTTTGACCCTAGCTAAAGACAACAGAGTACAGAAAATTAGGGGAGAATGCCCGAAAAGCTTTTTAGTTTTAAAGATTTTGACCCTAGAATTTAGAAAATTGCAATATATAAACTTTGACATTGCTTGTACTTAGAAAACATAGAAAACATTGCTTGTATTTAGAAAACATAGAAAACATTCTCTCTAGTAATATTGTTTTACTTCTGACAAATAATTATTTTGTCCCCAATATTGTTTGTAATAGACAGAACACATGAACTCAAGTATGTATATTAACTTCCTAACGTGGGCATATAAGGAACTATGAAAGTTTAGGTAGATATTAGGTGGAATTATGAAAGTTTAAAGACGGATGTGGTTATATTTATATATTGGTTAAATTACAAGTTTAGACATTTACGTCAATTTAGTGCTTAAACTTCAAAACGTGGCAATTGATCGATTTTAAGCGTAGGGCGATTTGGTCTTAAGAAGCGTTAGATTTATATTAGCTTTTGCTGTTTAATTGTAGAACTTGTGACAGTTTTTGCAACTTTTGTTTATTAGTGTATTCAGTGAATGGTGATGATCACAGGGAACCTTACTCTTCAGGCTTATGAAGAGCAATGTGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGGCTTCGCCGATTTAAAAGAAACTGTACAAATTTCGGATCTCTTGTGGATAAGTCAAACATGAAACTTACCAAATGGGAGGGTTTTGAGGTAAGTTCACTCTATAGTGCTATTGTTTTTGTTTACTTAAGTTAGTGTTGAATTGTTTGTTGTTTGGTCTGAATACAGGATAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCGTTTCCTTGGAGACCAATTCTATCTGGTACGTTTAATCTGTGCTATGCATTAGAGAAAGTTTGGAAAATTCCTTTGAAGGGTGTTTATTCGAGTGAAAAACTTAATTAATTGGGTAGGTTGTCTTGTGTGATTAGTTAAACTATACACAAATTGGTACAATCACTCACAGATTTCGAAAAAGAATGAGTTTAATTAAGTTTTCCTCCTTGAAGTTTTGTAATGACTTTTGAAATTTTAACAGAAAGTACTCTTGACATATTAAACGGCCGTTTCAAAACTTGCGTGTAGTTTAAGAGTATGTTTGAGAATGATTTTGAAATTACTTTTACATTTTCGAAATGACTCTAAAACATAGTTTTAATAATTCAAAATCAATTGGATATTTGGTTGCGCTTTTATAAGTTATTTTTATATCATTAAAATTGTTTTTCACAAAAGTATGTTTTAGAGTGGTTTTACACTTTTGAATGTAATTTTGAATTATTAAAGATGTGTTTTAGAGTGATACTAAACATGATAAAAGTACTTTCAACCATTTCAAAATCACTCTAAACAAGTTCGTAACATCCAATCCAACTATGACTTATTGGAAAAGGTGTGAAGAAACACTACTTCAAAAACCATCTCATGTTCACTTTTAACTTTTATGGAATTTACAAAAATCACTTTTTAGTACGAAAATTTAAGATTTCGTTTAATAAATCGCTTTTCACTGCTTAAGTCATACAATACTCATCACTCACCAGTGCCATGAAAACTTGTGATCGAGATAAGTTTATAGTAAATTCCCAAAGAGATATTATCAAAGTTGAAACATCTTCTTGCTTGAATTCTAAACAATATGGCAACAAAAAAAAAAAAAAAAAAATTGCAGCAACTGGATATACAGAGTATTACTTTGATGCAAGATCTGGAAAAGTATGCAGGTAAGAACACTCTAAACCCTTTTGTTTGTGGATCTTCTTTTGATAAAATCTCCTTTTGGTTCCAACTCTTCTTAATGGAAAATTTTCAGGCATGTAGAACACTGGAATGTTCCTAAAATGGCTTTACTGAAACAAATTTTGAGACCAACTCGAGAGTGGCTGTGGTTTAAGAAAGCAGGTGGTACCTGATTTTTCATTATGATAAGAACAATGATTAGAACAAAAACCTTTTTGGAGTATGATCAGCTTCATGTAAATTTTATAGTTTGATTTGGAAAATATATTTTGTGGGGTTGTATGATGAAATTATATGTAATAGAGCTTTTTTTTTTTTCTTGAGGTTTATAGAAGATATTTGTACAGATAGACGATGAAAGAATGGGGATTTCTTTTTCTATGAGTGAATTAGTTGACTAAGACCGAGGGTGAGCCATCAAAGGTGGAGATGTTATTAGTGTAGAGTTTCGATTGAATTCTAGAGATTTCTAAGGATTCGAAAATTCATCAGGGGAATTTCATTTTGTATGGTCTTTGATTATATCTAATATTATAGTTA ATGGTGATGATCACAGGGAACCTTACTCTTCAGGCTTATGAAGAGCAATGTGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGGCTTCGCCGATTTAAAAGAAACTGTACAAATTTCGGATCTCTTGTGGATAAGTCAAACATGAAACTTACCAAATGGGAGGGTTTTGAGGATAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCGTTTCCTTGGAGACCAATTCTATCTGGTACGTTTAATCTGTGCTATGCATTAGAGAAAGTTTGGAAAATTCCTTTGAAGGGTGTTTATTCGAGTGAAAAACTTAATTAA MVMITGNLTLQAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEGFEDKGIGHWKFSCILSFPWRPILSGTFNLCYALEKVWKIPLKGVYSSEKLN Homology
BLAST of Cucsat.G5825.T10 vs. NCBI nr
Match: XP_031743331.1 (uncharacterized protein LOC101218208 isoform X2 [Cucumis sativus]) HSP 1 Score: 169 bits (429), Expect = 3.60e-51 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. NCBI nr
Match: KAG7013759.1 (hypothetical protein SDJN02_23926 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169 bits (427), Expect = 7.95e-51 Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. NCBI nr
Match: XP_004138484.1 (uncharacterized protein LOC101218208 isoform X1 [Cucumis sativus] >KAE8646551.1 hypothetical protein Csa_005768 [Cucumis sativus]) HSP 1 Score: 169 bits (429), Expect = 1.52e-50 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. NCBI nr
Match: XP_008458172.1 (PREDICTED: uncharacterized protein LOC103497690 [Cucumis melo] >TYK03039.1 Nuclear transport factor 2 family protein [Cucumis melo var. makuwa]) HSP 1 Score: 166 bits (419), Expect = 4.96e-49 Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. NCBI nr
Match: XP_038906789.1 (uncharacterized protein LOC120092709 isoform X1 [Benincasa hispida]) HSP 1 Score: 164 bits (416), Expect = 1.41e-48 Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. ExPASy TrEMBL
Match: A0A0A0K7I1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006760 PE=4 SV=1) HSP 1 Score: 169 bits (429), Expect = 2.84e-51 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. ExPASy TrEMBL
Match: A0A5D3BY85 (Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001340 PE=4 SV=1) HSP 1 Score: 166 bits (419), Expect = 2.40e-49 Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. ExPASy TrEMBL
Match: A0A1S3C8H3 (uncharacterized protein LOC103497690 OS=Cucumis melo OX=3656 GN=LOC103497690 PE=4 SV=1) HSP 1 Score: 166 bits (419), Expect = 2.40e-49 Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. ExPASy TrEMBL
Match: A0A6J1H5M4 (uncharacterized protein LOC111460260 OS=Cucurbita moschata OX=3662 GN=LOC111460260 PE=4 SV=1) HSP 1 Score: 162 bits (410), Expect = 5.53e-48 Identity = 72/78 (92.31%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. ExPASy TrEMBL
Match: A0A6J1KYC4 (uncharacterized protein LOC111499312 OS=Cucurbita maxima OX=3661 GN=LOC111499312 PE=4 SV=1) HSP 1 Score: 159 bits (403), Expect = 6.34e-47 Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. TAIR 10
Match: AT2G46100.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 153.3 bits (386), Expect = 1.1e-37 Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. TAIR 10
Match: AT2G46100.2 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 102.4 bits (254), Expect = 2.2e-22 Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. TAIR 10
Match: AT3G04890.1 (Uncharacterized conserved protein (DUF2358) ) HSP 1 Score: 60.8 bits (146), Expect = 7.4e-10 Identity = 31/95 (32.63%), Postives = 47/95 (49.47%), Query Frame = 0
BLAST of Cucsat.G5825.T10 vs. TAIR 10
Match: AT3G04890.2 (Uncharacterized conserved protein (DUF2358) ) HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09 Identity = 30/94 (31.91%), Postives = 46/94 (48.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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