Cucsat.G5825 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGGTTACATATTTTAAGTTTATAAATTATGAAAGGGAAACAAATAAAAAAGTTAGATATTTTAACGTTTCTGGTGGTTGCCATTCGTTTAGGCGGGCCGAAGCTCCAAAATCATTCCAACGCCCAAAACCATCTTTCTCGGTGACTCCATGTTTCTAACTTCCAATGGCCACCATCGTCTCTTTTCAACCACATTCATCTCTCCATACCTCTCTCAACTCCATTCGACCTAATCCTTCTCTCAACTCCATTCGACCTAATCCCTCCCTCAGAATCTGCAGAATCCACTGCCAGGGGAACAATCCCACTACCGATTCCCCCAACAATCAAGAATCCAAGCCCGAGAATGCGGTGCTGAAGGTCGCCTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATATCTCCGCCCGCCGTTGGATGTTCAAACTCCCCTTAGGGCTCAGGAGCTCACTACGGATGTGTCCGGTTCAATTCCTCGCCCGCTTATCGTTGAAACGATTAAGGAGGATTTTCGGCGGTCCTACTTCGTCACAGGTTCGCGATTCTTTATTTATTTATTTTTTTAATATGGAAAGTTTTAGGGTTCTGACGTTCTTTTGAAATGAAGATTGTTTGGTTGAATTGAAATTGTTTTTAGTCAGTTATTACTTAGTTTGCTCGTTTGGAGGAGTTGTTGAAGTTTGGAGATGGGAAATCAGAATTACTAGTGTCGAGTTGGAGTGATGATCAAACTTCTTTAATTTGTAGTTAACATTGTTGCTTCTTTTTCTTGCTTTTATTAAAACCATAAAAAAATTTCAAAATAGTATCACATAGAAAGTTAAATCAAACACCCACAAACTCTAATACGCTAAAGTCAATTATTCAAATAGAAACTAAATTTTAACTCGTAGGAACTATAGTGAAGCGTTTAATACCATGGAGACCAAATTCAATTTTTTTTGAAGTGAATATAGCTGTGCAAGCTGGGAATTTCCTCTTCATATCCGATTCAAAAATTTTCCAAACTACTAACTTTGTTGGAATTCCTTGAATTCATTAAGTGCTGCTACGGACAACAACGTACAGAAAATTAGGGGACAATACCCCGAAAAGCTTTTTAGTTTTAACGATTTTGACCCTAGCTAAAGACAACAGAGTACAGAAAATTAGGGGAGAATGCCCGAAAAGCTTTTTAGTTTTAAAGATTTTGACCCTAGAATTTAGAAAATTGCAATATATAAACTTTGACATTGCTTGTACTTAGAAAACATAGAAAACATTGCTTGTATTTAGAAAACATAGAAAACATTCTCTCTAGTAATATTGTTTTACTTCTGACAAATAATTATTTTGTCCCCAATATTGTTTGTAATAGACAGAACACATGAACTCAAGTATGTATATTAACTTCCTAACGTGGGCATATAAGGAACTATGAAAGTTTAGGTAGATATTAGGTGGAATTATGAAAGTTTAAAGACGGATGTGGTTATATTTATATATTGGTTAAATTACAAGTTTAGACATTTACGTCAATTTAGTGCTTAAACTTCAAAACGTGGCAATTGATCGATTTTAAGCGTAGGGCGATTTGGTCTTAAGAAGCGTTAGATTTATATTAGCTTTTGCTGTTTAATTGTAGAACTTGTGACAGTTTTTGCAACTTTTGTTTATTAGTGTATTCAGTGAATGGTGATGATCACAGGGAACCTTACTCTTCAGGCTTATGAAGAGCAATGTGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGGCTTCGCCGATTTAAAAGAAACTGTACAAATTTCGGATCTCTTGTGGATAAGTCAAACATGAAACTTACCAAATGGGAGGGTTTTGAGGTAAGTTCACTCTATAGTGCTATTGTTTTTGTTTACTTAAGTTAGTGTTGAATTGTTTGTTGTTTGGTCTGAATACAGGATAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCGTTTCCTTGGAGACCAATTCTATCTGGTACGTTTAATCTGTGCTATGCATTAGAGAAAGTTTGGAAAATTCCTTTGAAGGGTGTTTATTCGAGTGAAAAACTTAATTAATTGGGTAGGTTGTCTTGTGTGATTAGTTAAACTATACACAAATTGGTACAATCACTCACAGATTTCGAAAAAGAATGAGTTTAATTAAGTTTTCCTCCTTGAAGTTTTGTAATGACTTTTGAAATTTTAACAGAAAGTACTCTTGACATATTAAACGGCCGTTTCAAAACTTGCGTGTAGTTTAAGAGTATGTTTGAGAATGATTTTGAAATTACTTTTACATTTTCGAAATGACTCTAAAACATAGTTTTAATAATTCAAAATCAATTGGATATTTGGTTGCGCTTTTATAAGTTATTTTTATATCATTAAAATTGTTTTTCACAAAAGTATGTTTTAGAGTGGTTTTACACTTTTGAATGTAATTTTGAATTATTAAAGATGTGTTTTAGAGTGATACTAAACATGATAAAAGTACTTTCAACCATTTCAAAATCACTCTAAACAAGTTCGTAACATCCAATCCAACTATGACTTATTGGAAAAGGTGTGAAGAAACACTACTTCAAAAACCATCTCATGTTCACTTTTAACTTTTATGGAATTTACAAAAATCACTTTTTAGTACGAAAATTTAAGATTTCGTTTAATAAATCGCTTTTCACTGCTTAAGTCATACAATACTCATCACTCACCAGTGCCATGAAAACTTGTGATCGAGATAAGTTTATAGTAAATTCCCAAAGAGATATTATCAAAGTTGAAACATCTTCTTGCTTGAATTCTAAACAATATGGCAACAAAAAAAAAAAAAAAAAAATTGCAGCAACTGGATATACAGAGTATTACTTTGATGCAAGATCTGGAAAAGTATGCAGGTAAGAACACTCTAAACCCTTTTGTTTGTGGATCTTCTTTTGATAAAATCTCCTTTTGGTTCCAACTCTTCTTAATGGAAAATTTTCAGGCATGTAGAACACTGGAATGTTCCTAAAATGGCTTTACTGAAACAAATTTTGAGACCAACTCGAGAGTGGCTGTGGTTTAAGAAAGCAGGTGGTACCTGATTTTTCATTATGATAAGAACAATGATTAGAACAAAAACCTTTTTGGAGTATGATCAGCTTCATGTAAATTTTATAGTTTGATTTGGAAAATATATTTTGTGGGGTTGTATGATGAAATTATATGTAATAGAGCTTTTTTTTTTTTCTTGAGGTTTATAGAAGATATTTGTACAGATAGACGATGAAAGAATGGGGATTTCTTTTTCTATGAGTGAATTAGTTGACTAAGACCGAGGGTGAGCCATCAAAGGTGGAGATGTTATTAGTGTAGAGTTTCGATTGAATTCTAGAGATTTCTAAGGATTCGAAAATTCATCAGGGGAATTTCATTTTGTATGGTCTTTGATTATATCTAATATTATAGTTACGCAAGTCACTACATAACATTACAAC ATGGCCACCATCGTCTCTTTTCAACCACATTCATCTCTCCATACCTCTCTCAACTCCATTCGACCTAATCCTTCTCTCAACTCCATTCGACCTAATCCCTCCCTCAGAATCTGCAGAATCCACTGCCAGGGGAACAATCCCACTACCGATTCCCCCAACAATCAAGAATCCAAGCCCGAGAATGCGGTGCTGAAGGTCGCCTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATATCTCCGCCCGCCGTTGGATGTTCAAACTCCCCTTAGGGCTCAGGAGCTCACTACGGATGTGTCCGGTTCAATTCCTCGCCCGCTTATCGTTGAAACGATTAAGGAGGATTTTCGGCGGTCCTACTTCGTCACAGGGAACCTTACTCTTCAGGCTTATGAAGAGCAATGTGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGGCTTCGCCGATTTAAAAGAAACTGTACAAATTTCGGATCTCTTGTGGATAAGTCAAACATGAAACTTACCAAATGGGAGGGTTTTGAGGATAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCGTTTCCTTGGAGACCAATTCTATCTGGTACGTTTAATCTGTGCTATGCATTAGAGAAAGTTTGGAAAATTCCTTTGAAGGGTGTTTATTCGAGTGAAAAACTTAATTAA MATIVSFQPHSSLHTSLNSIRPNPSLNSIRPNPSLRICRIHCQGNNPTTDSPNNQESKPENAVLKVAWYGSELLGIAASYLRPPLDVQTPLRAQELTTDVSGSIPRPLIVETIKEDFRRSYFVTGNLTLQAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEGFEDKGIGHWKFSCILSFPWRPILSGTFNLCYALEKVWKIPLKGVYSSEKLN Homology
BLAST of Cucsat.G5825 vs. NCBI nr
Match: XP_031743331.1 (uncharacterized protein LOC101218208 isoform X2 [Cucumis sativus]) HSP 1 Score: 390 bits (1002), Expect = 2.37e-136 Identity = 190/199 (95.48%), Postives = 190/199 (95.48%), Query Frame = 0
BLAST of Cucsat.G5825 vs. NCBI nr
Match: XP_004138484.1 (uncharacterized protein LOC101218208 isoform X1 [Cucumis sativus] >KAE8646551.1 hypothetical protein Csa_005768 [Cucumis sativus]) HSP 1 Score: 390 bits (1002), Expect = 1.32e-135 Identity = 190/200 (95.00%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Cucsat.G5825 vs. NCBI nr
Match: XP_008458172.1 (PREDICTED: uncharacterized protein LOC103497690 [Cucumis melo] >TYK03039.1 Nuclear transport factor 2 family protein [Cucumis melo var. makuwa]) HSP 1 Score: 369 bits (946), Expect = 4.47e-127 Identity = 180/200 (90.00%), Postives = 185/200 (92.50%), Query Frame = 0
BLAST of Cucsat.G5825 vs. NCBI nr
Match: XP_038906789.1 (uncharacterized protein LOC120092709 isoform X1 [Benincasa hispida]) HSP 1 Score: 339 bits (870), Expect = 1.67e-115 Identity = 168/200 (84.00%), Postives = 173/200 (86.50%), Query Frame = 0
BLAST of Cucsat.G5825 vs. NCBI nr
Match: KAG7013759.1 (hypothetical protein SDJN02_23926 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 335 bits (859), Expect = 1.64e-114 Identity = 164/203 (80.79%), Postives = 176/203 (86.70%), Query Frame = 0
BLAST of Cucsat.G5825 vs. ExPASy TrEMBL
Match: A0A0A0K7I1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006760 PE=4 SV=1) HSP 1 Score: 390 bits (1002), Expect = 2.04e-136 Identity = 190/200 (95.00%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Cucsat.G5825 vs. ExPASy TrEMBL
Match: A0A5D3BY85 (Nuclear transport factor 2 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001340 PE=4 SV=1) HSP 1 Score: 369 bits (946), Expect = 2.17e-127 Identity = 180/200 (90.00%), Postives = 185/200 (92.50%), Query Frame = 0
BLAST of Cucsat.G5825 vs. ExPASy TrEMBL
Match: A0A1S3C8H3 (uncharacterized protein LOC103497690 OS=Cucumis melo OX=3656 GN=LOC103497690 PE=4 SV=1) HSP 1 Score: 369 bits (946), Expect = 2.17e-127 Identity = 180/200 (90.00%), Postives = 185/200 (92.50%), Query Frame = 0
BLAST of Cucsat.G5825 vs. ExPASy TrEMBL
Match: A0A6J1KYC4 (uncharacterized protein LOC111499312 OS=Cucurbita maxima OX=3661 GN=LOC111499312 PE=4 SV=1) HSP 1 Score: 329 bits (844), Expect = 7.34e-112 Identity = 161/200 (80.50%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of Cucsat.G5825 vs. ExPASy TrEMBL
Match: A0A6J1H5M4 (uncharacterized protein LOC111460260 OS=Cucurbita moschata OX=3662 GN=LOC111460260 PE=4 SV=1) HSP 1 Score: 328 bits (841), Expect = 2.10e-111 Identity = 160/200 (80.00%), Postives = 173/200 (86.50%), Query Frame = 0
BLAST of Cucsat.G5825 vs. TAIR 10
Match: AT2G46100.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 231.5 bits (589), Expect = 6.7e-61 Identity = 105/171 (61.40%), Postives = 129/171 (75.44%), Query Frame = 0
BLAST of Cucsat.G5825 vs. TAIR 10
Match: AT2G46100.2 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45 Identity = 85/147 (57.82%), Postives = 106/147 (72.11%), Query Frame = 0
BLAST of Cucsat.G5825 vs. TAIR 10
Match: AT3G04890.1 (Uncharacterized conserved protein (DUF2358) ) HSP 1 Score: 72.4 bits (176), Expect = 5.2e-13 Identity = 36/109 (33.03%), Postives = 56/109 (51.38%), Query Frame = 0
BLAST of Cucsat.G5825 vs. TAIR 10
Match: AT3G04890.2 (Uncharacterized conserved protein (DUF2358) ) HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12 Identity = 35/108 (32.41%), Postives = 55/108 (50.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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