Cucsat.G15098.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G15098.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein RDM16 isoform X2
Location	ctg197: 533163 .. 539032 (-)
RNA-Seq Expression	Cucsat.G15098.T6
Synteny	Cucsat.G15098.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCCCTGATGATAAACGTGAGCCGCAATTGCGCTGCCCATCCCGCCCGGACGAACTCTCTCACTCGTCAGGAGAGTAGATAGAGCGAAACCCTAGAGAGAGAGGAAGACGAAGAAGAAGGAGAAGAAGAAGAGGAAGAAATTCAAGTTCAGAGCCTTTGGAGCCCTGGAAATGGATAGGGTTTCCGAGAAGGAGAAATCAAGCAAGCGTTCTAGAGAAGAACGCGATCGAGACCACAAGCATCGAAGTCGGGATACCGAGGATAAGCATTTATCCAAGGATGAAAAGCATCGTGAATCCGATCGCCACCATCGCCGGCGACACCATCGATCGGACCGTGATTCGAAGCGTGAGCGTTCGCATGAGCCTCGTGAACACAAACATCGGCGTGATATGTCTCCTGATGAGCGTGAAAGCTCCCAAGACCGCGATTTTAAGCGGGAAAGGTCTTATGAACTTAGGGAGGAGAGAGAAAGAAGTAGGGATAGGGATTCGTCTAAGCGAGAGAAGTCGAATGAACCGAGAGGATTGAGAGAAGGCAGCGAAGAGCGTGGCAAGCTGCGTGAGGTGAGGCGCGAGGAATCAGACAATGAGCATGAACGGGAAGGGTCGTTCGAGCCTATTCAAAATTCCGTACGTCCAAACAAGAGGAAGGAGAGGGGAGGAAGTGAGGATAGATTTGATGGTGGGGAGAAGAGGGCCAGGGCTTCGGAAGTTGGGAATGAAGTGAATGGAGCTGAGATGGATGAGAAAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGACGAAGGAGCAAACTTGAGTGGTCGGGGAAGGAGGGACAGGAAGCGGTTTGAGGATCGAGGGAAGGAAGAAGATAATGGTGGAAATGTTGATGAGAAGCATGGGAAAGTGAATGAATACAAGTCCAAAGGAGACGTTGGGGATGGGAAAGTTCAGTTTGGAGGCACCACCGATGAAAAAAGGTCACTGGGGAATGTAAGTTTACATTCCATTTTGCGTATGCTGTATTTTATCACAATGAATTACAGTACTAAAATTTCTTCATACATCATGGGCATCAGTTTGTAGAACCGACAATTGTTCGCTAGAGCCTGTTTGTCAACCATTTCGTTATAAACACTATTTCCCCCCTGTTAGTTTCTTTCTACGTTGGCTAAATTTTATGTGAACCAAGTTTTGAAAACTAAAAATTTGCTGTTTCTTAGAATTTGTCTGAGAATTCAAATGTTCTCTCGGGATGATGAAAACCTTGATTAAGAATTTTCTGAGCAAAATACAATCTCAAAAAACCAAATGGTTATCAAATGGGCTCTAGAAATCAAGTTCTGCCATATATCATTGTGTTTTACTATTGTACATTTCATTTGGCAATTCATCCTAGTATCACTTTGTTTTCAATCATCAATGGTTGGGAAAGCGTTTCTTGTTTACGAAAAATGGAACCAAGTACATTTTAGGAGACTTCCAGAGTTACTTTATCTCTTCGGAATTTCCTTGCTGACGAGTGACTTCACACTTCTTTTGCTACTTTCTGTTGTTTCTCCCCCTTAGGCTTAGGTCACTACTTGGGCTTGCCGCTTGTGCCCGCTCTAACATCCCTTATAATTAATGTCCTCGCTTGGCATTCCTTTCTTTCCTCCCTTTCTGACAATAACTAAGTCCTTATCTTCTTGAATTGACAGGAAATTTGCATGTATATATACATACATATAAATATATAATGTGATTGTGTTGGTCCATTAGGGTGTTCTCGTTTGTTTTTTGTTTCTTCAATAAAGGGGTTTCTCGTATAATATGTATATATACATATATATATGTGATCATCATTGTGTGACCTCTAGGCTTGAAATTTTATTTTTGGGAGGCAGTTTCATGTGAGGAAACTCATATCTCTATAAACATTATGAAGCCTAAGAATTGTCATTGCTAGGATGTGCACTATTTGTGGGATCTTGAATTTTTTAGTTGTGAACAAATTATGTTCACAGGTCTTGTTGTAATATGGTGCTGTTCGTAGATGGGTATAAGCTCAAGAATTTTATTTGATTATGTTATGCTAATTAAAGTCACCAAAATGGATTTTGTTAGTTTAAGCTTTATGGTGTGTTTCAAACAATTTATCTTCCAAGTCAGAACATTTATTCATTCTTTGGTATATTAAGCATCTTGGCAATTTTCTAGCCAGTAGCTTTGAAGTGGGAGTGAGTTTGAGTGTTGTTTGACATTTGTTGGATGTAAAGAGCTGACATATTTTGTAATTTTGTTAATTGTTTGGTTTATAATGCACACCCTCGTTCAAGGTTCCTTATAGTGATTCTTACCTTCTCTTCATCTTTTAATCTGTATACATGGGTTAATTCTATAATATTGAGGAAGGTCTTCCATGATTATGATGCCTTTGGGTAGTGCTAGACTGCTAGTAATGAACTTAATGAACTGAAGTCATAATCATGCAGGGATCTATGGTGGAACCTACCGATATGCCATCAGCAAGTGTGCCCCAGAATTTGTTACATCCTAGTCATTCCCTTCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAGGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGACATCCTCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCGGAGAAGTTGAAGAGAATTCCCCTGGTAAGTTAGGCAACAGAGATACTTTGATCCATGCTAGCTAGTTTCCCGCACTTTGATGTTGGTTTTACATATACATGGATGCATATGCGCATGTGTGTATTCGGTTTTTCTTCTGTGTATCAAGTGTTACTATTTGATCTTATAGATGAAGAAGGTTGGGGGTTCAAGTTCTGCTAATAGCTCAGTTGTGAAATCGGAGGAGAAAGCTAAACCTCCCAGTGGTATATTGGGTCCACTGTCAACTACCAATGATGCTACAACTCTTTCAACTGGGGTAGTGTCTAGTTCGTCGACATTACCTTCTGCTGCCAATGCTCTTGATGGTGGTATTAATGTTCCGGCTGGCCTTACCTCTATACCCCATATTGAAGCTGTTAAGCGTGCTCAGGAGCTCGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTTATAAATTTGTTTCCAGGGAATGTAGCAACTGACGTTGCTGTTCCACAGAAACCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGTAGGGAAATTGACGAACAAGGAAATGTAGTCAATATAACCAAACCCAGCAACCTTAGCACTCTTAAGGTTTGGAATGAACTTACATCTCTTTCGGAGGTTTTTTTCTTCTTTTATTAGCATTGAATTTTGAATAGATTGACCTTGTATACATTTCTAACTTCGCAGGTTAACATCAACAAACAAAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGATGTGGATCCAGATTCAAACCCTCATTTTGATGAGAGAATGGGTATAAATAAAACTAAACTGCTGAGGCCAAAGAGAATGAGTTTCCAGTTCGTTGAGGAAGGGAAATGGTCGAAGGAGGCTGAAACCTTAAAATTGAGGGTACTTATAGTTTCTTTCATAGTTGTCTTTGGTGAAAGAATGCTTGCATACTTATTTGTTAAATAAAATTCTTATATTTCTGCTATAGAGTAAATTTGGAGAGGCACAAGCGAAAGAACGAAGAGAAAAGCAGGCACAGTTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCAAATTTGATCGAGGTTTCAGAGAGAGTGGTGAAGGAAAAAACAAAAGACCCAATTCCTGAAATTGAGTGGTGGTAAGCTGATATTTTCTATTATGGTATTTCTTGAACTGTCTTATTTTACTTTTTATGTAAAAATTTGTAAGCTAAGAGTTGAGCAGACTGTATCTTTTCCCGTTCTCCTCTTGCAGTTATTTTAATTTTCTAGCATTTTGTTAATGTCTAGCTTTTAATGGGATGGCTTTGGATATTCAATTCTAATATATAATTTTTAAAAAAAATATCTAGGGATGTCCCGCTTTTGCAATCCGGTGCGTACAAGGATTTGGGAGATGGTTTTGTGGCCGATGACAAATTGAGAAAGGACAAGATTACCATATACGTGGAGCATCCTCGTCCTATTGAACCTCCTGCCGAGCCAGCTCTCCCCCCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGTACACAGCGTCGTCTAGCAAAGGAGAAAGATAGACAGGAAATGATTAGACAAGGCCTGATAGAACCACCTAAACCGAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTTGAGAAAGAGATTTGTGCTGCAGCTGCTGAGAGGGAGCAAGCTCACATAGATCGAAATATTGCACGAAAACTCACCCCTGCAGAGCGCCGTGAGAAGAAAGAACGTAAACTATTTGACGATTCAAATTCACTCGAGACATTTGTGTCTGTTTACAAGATCAACGATCTATCACACCCCCAGGCCCGGTTTAAAGTTGACGTTAATGCTAGAGAGAACCGATTGACAGGGTGTGCTGTGATATGCGATGGCATCAGTGTTCTGGTCGTTGAAGGGGGTAGCAAGTCCATCAAGAGGTACGCAAAACTTATGCTCAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGAGGAAAATGACGATAAACCCCTTAACAAATGTTCCTTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAATAGATTTTCCATCCAGGAGTGCATGACTGAGGCAGCTGCTAGGAAGATTTTCGCTGATGCCGGTGTCGGTCATTACTGGGATTTTGCTATTAACTTCTCCGACGATCAATTATAATTCAACTTCTGCACTGTTAGTTGATGCGAATTGCTGATGATTTACTTCAGGTCAAGAAGCAAGAAATGCAGAAATGTTAAAAGCCTATATATCATCACGGTATTGCCGGTCTTACTTGTTTCTATTAATTGGTTAGGTGGGAAGATTTCATTATGTTCCAGCTCACTTTTTCCACAAGTTCCTGGGAATTTTTCGGATTTCATGAGTTGCAACCAACATCATCTGTATGGGAAATATGTTTGTAGTAGTTGGTGATCAGTTGGTATCGCCCAAGACCACCATCTTCAAGAAACGGGTATTGTGTCCAATATTCGTCTTATAGTCTTCATTTCCTTGTAGTTTTATAGAATCTAGAGTTGTGTTTCTTTCTCTTTTCTCCACCCTTCATAAGTGAGGAATGTTTGACAAATCCACTCGGTTGGGTAGTTAAATGAAGGAAGGTGGCTTTAAATAACTTTCTACTCAAACAAAGAGGTACCCTTTTTACTAATTAATTTCCGCACGGTTATTGTGAAAACTCTATACTGGTTCTTCCTTGTTTTATCTTCTTGTTTCTTCTCAATTGTAGGTTCATAGGAGATTTGAACCCATGGCGAAAAAGCTCTGACCAATTGAATTTCATCGGTTGAGTTTGTGATTAAGGGTGAGTGAGTTTGATAATATCCATTCCCACAAATGTCTTTTCATTTTAGTAAAATTTTACACCATTTCCTGGATTTTCAAATGATTATAGTAATAAACACATTCTAGTTGAAGGTGTTTTGTAGTATATCTTTTTCGAGGTTTGGTTCTATAATGCTTTTGAAGTTGTGTGTCGAATCAATACAACTTTTAAAATGCTCCCTCTCTATCCTTCTTTTTGCTTTTATACATTGAAATTTTCTGGGCTCATTTTTTAAT

Coding sequence (CDS)

ATGGATAGGGTTTCCGAGAAGGAGAAATCAAGCAAGCGTTCTAGAGAAGAACGCGATCGAGACCACAAGCATCGAAGTCGGGATACCGAGGATAAGCATTTATCCAAGGATGAAAAGCATCGTGAATCCGATCGCCACCATCGCCGGCGACACCATCGATCGGACCGTGATTCGAAGCGTGAGCGTTCGCATGAGCCTCGTGAACACAAACATCGGCGTGATATGTCTCCTGATGAGCGTGAAAGCTCCCAAGACCGCGATTTTAAGCGGGAAAGGTCTTATGAACTTAGGGAGGAGAGAGAAAGAAGTAGGGATAGGGATTCGTCTAAGCGAGAGAAGTCGAATGAACCGAGAGGATTGAGAGAAGGCAGCGAAGAGCGTGGCAAGCTGCGTGAGGTGAGGCGCGAGGAATCAGACAATGAGCATGAACGGGAAGGGTCGTTCGAGCCTATTCAAAATTCCGTACGTCCAAACAAGAGGAAGGAGAGGGGAGGAAGTGAGGATAGATTTGATGGTGGGGAGAAGAGGGCCAGGGCTTCGGAAGTTGGGAATGAAGTGAATGGAGCTGAGATGGATGAGAAAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGACGAAGGAGCAAACTTGAGTGGTCGGGGAAGGAGGGACAGGAAGCGGTTTGAGGATCGAGGGAAGGAAGAAGATAATGGTGGAAATGTTGATGAGAAGCATGGGAAAGTGAATGAATACAAGTCCAAAGGAGACGTTGGGGATGGGAAAGTTCAGTTTGGAGGCACCACCGATGAAAAAAGGTCACTGGGGAATGGATCTATGGTGGAACCTACCGATATGCCATCAGCAAGTGTGCCCCAGAATTTGTTACATCCTAGTCATTCCCTTCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAGGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGACATCCTCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCGGAGAAGTTGAAGAGAATTCCCCTGATGAAGAAGGTTGGGGGTTCAAGTTCTGCTAATAGCTCAGTTGTGAAATCGGAGGAGAAAGCTAAACCTCCCAGTGGTATATTGGGTCCACTGTCAACTACCAATGATGCTACAACTCTTTCAACTGGGGTAGTGTCTAGTTCGTCGACATTACCTTCTGCTGCCAATGCTCTTGATGGTGGTATTAATGTTCCGGCTGGCCTTACCTCTATACCCCATATTGAAGCTGTTAAGCGTGCTCAGGAGCTCGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTTATAAATTTGTTTCCAGGGAATGTAGCAACTGACGTTGCTGTTCCACAGAAACCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGTAGGGAAATTGACGAACAAGGAAATGTAGTCAATATAACCAAACCCAGCAACCTTAGCACTCTTAAGGTTAACATCAACAAACAAAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGATGTGGATCCAGATTCAAACCCTCATTTTGATGAGAGAATGGGTATAAATAAAACTAAACTGCTGAGGCCAAAGAGAATGAGTTTCCAGTTCGTTGAGGAAGGGAAATGGTCGAAGGAGGCTGAAACCTTAAAATTGAGGAGTAAATTTGGAGAGGCACAAGCGAAAGAACGAAGAGAAAAGCAGGCACAGTTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCAAATTTGATCGAGGTTTCAGAGAGAGTGGTGAAGGAAAAAACAAAAGACCCAATTCCTGAAATTGAGTGGTGGGATGTCCCGCTTTTGCAATCCGGTGCGTACAAGGATTTGGGAGATGGTTTTGTGGCCGATGACAAATTGAGAAAGGACAAGATTACCATATACGTGGAGCATCCTCGTCCTATTGAACCTCCTGCCGAGCCAGCTCTCCCCCCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGTACACAGCGTCGTCTAGCAAAGGAGAAAGATAGACAGGAAATGATTAGACAAGGCCTGATAGAACCACCTAAACCGAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTTGAGAAAGAGATTTGTGCTGCAGCTGCTGAGAGGGAGCAAGCTCACATAGATCGAAATATTGCACGAAAACTCACCCCTGCAGAGCGCCGTGAGAAGAAAGAACGTAAACTATTTGACGATTCAAATTCACTCGAGACATTTGTGTCTGTTTACAAGATCAACGATCTATCACACCCCCAGGCCCGGTTTAAAGTTGACGTTAATGCTAGAGAGAACCGATTGACAGGGTGTGCTGTGATATGCGATGGCATCAGTGTTCTGGTCGTTGAAGGGGGTAGCAAGTCCATCAAGAGGTACGCAAAACTTATGCTCAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGAGGAAAATGACGATAAACCCCTTAACAAATGTTCCTTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAATAGATTTTCCATCCAGGAGTGCATGACTGAGGCAGCTGCTAGGAAGATTTTCGCTGATGCCGGTGTCGGTCATTACTGGGATTTTGCTATTAACTTCTCCGACGATCAATTATAA

Protein sequence

MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKRERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGLREGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARASEVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHGKVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVSSISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARKIFADAGVGHYWDFAINFSDDQL

Homology

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BLAST of Cucsat.G15098.T6 vs. ExPASy Swiss-Prot
Match: Q9C7E7 (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 3.1e-210
Identity = 475/854 (55.62%), Postives = 584/854 (68.38%), Query Frame = 0


Query: 80  RESSQDRDFKRERSYELREERERSRDRD-SSKREKSNEPRGLREG--SEERGKLREVRRE 139
           R    DRD      +  + E  R RDRD  SKR  S+  R  R G   +ER + ++ RR 
Sbjct: 8   RSHRDDRDRDSSPDHSPQREGGRRRDRDVDSKRRDSDHYRSSRRGDREDERDRTKD-RRG 67

Query: 140 ESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARASEVGNEVNGAEMDEKKE 199
            S    EREGS    ++  + +  +   GS+++    +++ R  E     NGA   + K+
Sbjct: 68  RSVERGEREGS----RDREKHHHERSHEGSKEKESRSKRKDREEE-----NGAR--DGKK 127

Query: 200 RRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHGKVNEYKSKGDVGDGKV 259
           + RFAD          G G R R RFED   E      V+ K  +V+E     +   G V
Sbjct: 128 KSRFAD----------GNGER-RSRFEDVAIE------VENKDAQVSEGSGATNPTSG-V 187

Query: 260 QFGGTTDEKRSLGNGSMVEPTDMPSASVPQNL-LHPSHSLPIKVSSISTTNENRGVSITR 319
             G +T                   +S+P      PS +L  KVSSISTT+EN+  S+ R
Sbjct: 188 TMGAST------------------YSSIPSEASAAPSQTLLTKVSSISTTDENK-ASVVR 247

Query: 320 SHEVHGKSSTDGTS-STAGK-SGNLSLDA---LAKAKKALQMQKELAEKLKRIPLMKKVG 379
           SHEV GKSSTDG   STAGK S NL LD+    AKA+KALQ+QK LA++LK +PL+KK  
Sbjct: 248 SHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQLQKGLADRLKNLPLLKK-- 307

Query: 380 GSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAANALDGGINVP 439
                     K   +  P + +  P STT  A  +STG  S +STLP             
Sbjct: 308 --------ATKPTSEGSPHTRV--PPSTTTPA--VSTG-TSFASTLPHTG---------L 367

Query: 440 AGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 499
           AG  SI +IEAVKRAQELAA MGF QD EFAP+INLFPG   +D+ V Q+P K PVLR+D
Sbjct: 368 AGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQAPSDMTVAQRPEKPPVLRVD 427

Query: 500 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHFDERMGIN 559
           ALGREIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP+L+ D   NP+FD RMGI+
Sbjct: 428 ALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKPQLEADLKENPYFDTRMGID 487

Query: 560 KTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINPN 619
           + K+LRPKRMSFQFVEEGKW+++AE LK +S FGEA+AKE + KQAQLAKA    DINPN
Sbjct: 488 EKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKELKVKQAQLAKAN--DDINPN 547

Query: 620 LIEVSERVV-KEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDKITIYVEHPR 679
           LIEVSERV  KEK K+PIP++EWWD  +L +G Y ++ DG + +  L+ +K+T Y+EHPR
Sbjct: 548 LIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGTITESHLKIEKLTHYIEHPR 607

Query: 680 PIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 739
           PIEPPAE A PPPQPLKLTKKEQKKLRTQRRLAKEK++QEMIRQGL+EPPK KVKMSNLM
Sbjct: 608 PIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLM 667

Query: 740 KVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSLET 799
           KVLGSEATQDPTKLEKEI  AAAEREQAH DRN ARKLTPAE+REKKERKLFDD  ++ET
Sbjct: 668 KVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVET 727

Query: 800 FVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLMLRR 859
            VSVYKI  LSHP+ RFKV++NARENRLTGC+V+ D +SV+VVEG SK+IKRY KLM++R
Sbjct: 728 IVSVYKIKKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMMKR 786

Query: 860 INWAASVKEE--EEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARKIFADAG 919
           INW  + ++E  E+EE +    NKC LVWQGS+ K SF+RF + EC+TE+ A+K+F DAG
Sbjct: 788 INWEEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRFHVHECVTESTAKKVFMDAG 786

Query: 920 VGHYWDFAINFSDD 922
           V HYWD A+N+SDD
Sbjct: 848 VVHYWDLAVNYSDD 786

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BLAST of Cucsat.G15098.T6 vs. ExPASy Swiss-Prot
Match: Q5ZJ85 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.9e-74
Identity = 190/496 (38.31%), Postives = 282/496 (56.85%), Query Frame = 0


Query: 439 IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 498
           IE  ++A EL AR+        G   +     L NL    +A      +  TK   L LD
Sbjct: 200 IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILD 259

Query: 499 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHFDERMGI 558
             GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN +FD R+ I
Sbjct: 260 EQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDLRVSI 319

Query: 559 NKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 618
             T   R KR +F+F E+GK+ K A+ L+ +++         ++ QA++++A     I+ 
Sbjct: 320 --TPAQRQKR-TFKFHEKGKFEKIAQRLRTKAQL--------KKLQAEISQAARKTGIHT 379

Query: 619 NLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDKITIYVEHPR 678
           +         KE  +  IPEIEWWD  ++ +G   DL  G  +  K     IT  VEHP 
Sbjct: 380 STKLALITPKKELKEGEIPEIEWWDSYIIPNGL--DLKGG-TSSKKDEYFGITNLVEHPA 439

Query: 679 PIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 738
            + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM
Sbjct: 440 QLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLM 499

Query: 739 KVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSLET 798
           +VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL +D  S   
Sbjct: 500 RVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKIKKLKEDV-SQGV 559

Query: 799 FVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLMLRR 858
            ++VY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML R
Sbjct: 560 HIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHR 619

Query: 859 INW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARKIF 918
           I W    ++ K E+++E+D+   K  NKCSLVW+G+    SF     ++C TE  AR+ F
Sbjct: 620 IKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHF 678

Query: 919 ADAGVGHYWDFAINFS 920
              G  HYWD A++ S
Sbjct: 680 KKHGAEHYWDLALSES 678

[Close]

BLAST of Cucsat.G15098.T6 vs. ExPASy Swiss-Prot
Match: Q922U1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 2.1e-68
Identity = 214/632 (33.86%), Postives = 328/632 (51.90%), Query Frame = 0


Query: 320 HGKSSTDGT-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKRIP--------LM 379
           H KSS+D +         G    +S ++    K+ +   +E+ E+ + IP        ++
Sbjct: 78  HSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGML 137

Query: 380 KKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAANALDGG 439
            K+       ++  + EE+ K  S I  P      A    T   S    LP       G 
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQLSFISPP------APQPKTPSSSQPERLPI------GN 197

Query: 440 INVPAGLTSIPH--IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVA 499
              P+   +  +  IE  ++A EL AR+        G   +     L NL    +A    
Sbjct: 198 TIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKV 257

Query: 500 VPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDV 559
             +  TK   L LD  GR +D  G  V +T    + TLK NI   K++ F Q LK +   
Sbjct: 258 ELKDQTKPTPLILDEQGRTVDATGKEVELT--HRMPTLKANIRAVKREQFKQQLKEKPSE 317

Query: 560 DPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQ 619
           D +SN  FD R+ I  +   + +R +F+F ++GK+ K A+ L+ +++  + QA      +
Sbjct: 318 DMESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------E 377

Query: 620 AQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDK 679
              A  K     +  L  ++ +  KE  +  IPEIEWWD  ++ +G   DL +    ++ 
Sbjct: 378 ISQAARKTGIHTSTRLALIAPK--KELKEGDIPEIEWWDSYIIPNGF--DLTE----ENP 437

Query: 680 LRKD--KITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ 739
            R+D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R 
Sbjct: 438 KREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRL 497

Query: 740 GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERR 799
           GL  PP+PKV++SNLM+VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+
Sbjct: 498 GLTPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRK 557

Query: 800 EKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVE 859
            KK +KL +D  S    +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVE
Sbjct: 558 VKKIKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVE 617

Query: 860 GGSKSIKRYAKLMLRRINW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNR 919
           GG K+ K++ +LML RI W    ++ K +++EE+D+   K  NKC LVW+G+    SF  
Sbjct: 618 GGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGE 677

[Close]

BLAST of Cucsat.G15098.T6 vs. ExPASy Swiss-Prot
Match: Q2KIA6 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.5e-68
Identity = 210/624 (33.65%), Postives = 331/624 (53.04%), Query Frame = 0


Query: 320 HGKSSTDGT-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKRIP--------LM 379
           H KSS+D +         G    +S ++    K+ +   +E+ E+ + IP        ++
Sbjct: 78  HSKSSSDRSRKRDLKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGML 137

Query: 380 KKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTL-PS-AANALD 439
            K+       ++  + EE+ K  S I  P       ++     +   +T+ PS AA  ++
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPERLPIGNTIQPSQAATFMN 197

Query: 440 GGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQKPTKA 499
             I           ++A  +AQ LA + G   +     L NL    +A      +  TK 
Sbjct: 198 DAIE---KARKAAELQASIQAQ-LALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKP 257

Query: 500 PVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHF 559
             L LD  GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN  F
Sbjct: 258 TPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFF 317

Query: 560 DERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKA 619
           D R+ I  +   + +R +F+F ++GK+ K A+ L+ +++  + QA      +   A  K 
Sbjct: 318 DPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKT 377

Query: 620 APDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKD--KI 679
               +  L  ++ +  KE  +  IPEIEWWD  ++ +G   DL +    ++  R+D   I
Sbjct: 378 GIHTSTRLALIAPK--KELKEGDIPEIEWWDSYIIPNGF--DLTE----ENPKREDYFGI 437

Query: 680 TIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKP 739
           T  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+P
Sbjct: 438 TNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEP 497

Query: 740 KVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLF 799
           KV++SNLM+VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL 
Sbjct: 498 KVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLK 557

Query: 800 DDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKR 859
           +D  S    +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K+
Sbjct: 558 EDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKK 617

Query: 860 YAKLMLRRINW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMT 919
           + +LML RI W    ++ K +++EE+D+   K  NKC LVW+G+    SF     ++C T
Sbjct: 618 FKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPT 677

[Close]

BLAST of Cucsat.G15098.T6 vs. ExPASy Swiss-Prot
Match: O43395 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 3.5e-68
Identity = 210/631 (33.28%), Postives = 328/631 (51.98%), Query Frame = 0


Query: 320 HGKSSTDGT-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKRIP--------LM 379
           H KSS+D +         G    +S ++    K+ +   +E+ E+ + IP        ++
Sbjct: 78  HSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGML 137

Query: 380 KKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTL-PSAANALDG 439
            K+       ++  + EE+ K  S I  P       ++     +   +T+ PS A     
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPERLPIGNTIQPSQAATFMN 197

Query: 440 GINVPAGLTSIPHIEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAV 499
                        IE  ++A EL AR+        G   +     L NL    +A     
Sbjct: 198 DA-----------IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVE 257

Query: 500 PQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVD 559
            +  TK   L LD  GR +D  G  + +T    + TLK NI   K++ F Q LK +   D
Sbjct: 258 LKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSED 317

Query: 560 PDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQA 619
            +SN  FD R+ I  +   + +R +F+F ++GK+ K A+ L+ +++  + QA      + 
Sbjct: 318 MESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EI 377

Query: 620 QLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKL 679
             A  K     +  L  ++ +  KE  +  IPEIEWWD  ++ +G   DL +    ++  
Sbjct: 378 SQAARKTGIHTSTRLALIAPK--KELKEGDIPEIEWWDSYIIPNGF--DLTE----ENPK 437

Query: 680 RKD--KITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQG 739
           R+D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R G
Sbjct: 438 REDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLG 497

Query: 740 LIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERRE 799
           L+ PP+PKV++SNLM+VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ 
Sbjct: 498 LMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKV 557

Query: 800 KKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEG 859
           KK +KL +D  S    +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEG
Sbjct: 558 KKIKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEG 617

Query: 860 GSKSIKRYAKLMLRRINW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRF 919
           G K+ K++ +LML RI W    ++ K +++EE+D+   K  NKC LVW+G+    SF   
Sbjct: 618 GPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEM 677

[Close]

BLAST of Cucsat.G15098.T6 vs. NCBI nr
Match: XP_004143591.1 (protein RDM16 isoform X1 [Cucumis sativus] >KGN50493.1 hypothetical protein Csa_000308 [Cucumis sativus])

HSP 1 Score: 1696 bits (4391), Expect = 0.0
Identity = 921/923 (99.78%), Postives = 921/923 (99.78%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL
Sbjct: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG 240
           EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG
Sbjct: 181 EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG 240

Query: 241 KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS 300
           KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS
Sbjct: 241 KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS 300

Query: 301 SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360
           SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL
Sbjct: 301 SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360

Query: 361 KRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA 420
           KRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA
Sbjct: 361 KRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA 420

Query: 421 NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK 480
           NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK
Sbjct: 421 NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK 480

Query: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540
           PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN
Sbjct: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540

Query: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK 600
           PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK
Sbjct: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK 600

Query: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK 660
           AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK
Sbjct: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK 660

Query: 661 ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720
           ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK
Sbjct: 661 ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720

Query: 721 PKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKL 780
           PKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAERREKKERKL
Sbjct: 721 PKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL 780

Query: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840
           FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK
Sbjct: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840

Query: 841 RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900
           RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR
Sbjct: 841 RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900

Query: 901 KIFADAGVGHYWDFAINFSDDQL 923
           KIFADAGVGHYWDFAINFSDDQL
Sbjct: 901 KIFADAGVGHYWDFAINFSDDQL 923

[Close]

BLAST of Cucsat.G15098.T6 vs. NCBI nr
Match: XP_008461606.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo] >KAA0034019.1 U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo var. makuwa])

HSP 1 Score: 1639 bits (4244), Expect = 0.0
Identity = 892/923 (96.64%), Postives = 904/923 (97.94%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEPREHKHRRD SPDERE SQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL
Sbjct: 61  ERSHEPREHKHRRDRSPDEREGSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           REGSEERGKLREVRREESDNE EREGSFEPIQNSVR NKRKERGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEREREGSFEPIQNSVRSNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG 240
           EVGNEVNGAEMDEKKERRRFADGEKD+GANLSGR RRDRKRFEDR KEEDNGGNVDEKH 
Sbjct: 181 EVGNEVNGAEMDEKKERRRFADGEKDDGANLSGRARRDRKRFEDRVKEEDNGGNVDEKHA 240

Query: 241 KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS 300
           KV EYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTD+PSASVPQNLLHPS SLPIKVS
Sbjct: 241 KVIEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDIPSASVPQNLLHPSPSLPIKVS 300

Query: 301 SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360
           SISTTNEN+GVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL
Sbjct: 301 SISTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360

Query: 361 KRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA 420
           K+IPLMKKVGGSSSANSSVVK EEKAKPPSG+LG LSTTNDATTLSTGVVSSSST PSAA
Sbjct: 361 KKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVSSSSTFPSAA 420

Query: 421 NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK 480
           NALD GINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN+ATDVAVPQK
Sbjct: 421 NALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQK 480

Query: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540
           PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN
Sbjct: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540

Query: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK 600
           PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER+EKQAQLAK
Sbjct: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERKEKQAQLAK 600

Query: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK 660
           AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLL S  Y+DLGDGFVAD+KLRKDK
Sbjct: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGFVADEKLRKDK 660

Query: 661 ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720
           ITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK
Sbjct: 661 ITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720

Query: 721 PKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKL 780
           PKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAERREKKERKL
Sbjct: 721 PKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL 780

Query: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840
           FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK
Sbjct: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840

Query: 841 RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900
           RYAKLMLRRINWAASVKEEEEEE DDKP+NKCSLVWQGSVAKSSFNRFSIQECMTEAAAR
Sbjct: 841 RYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900

Query: 901 KIFADAGVGHYWDFAINFSDDQL 923
           KIFADAGVGHYWDFA+NFSDDQ+
Sbjct: 901 KIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of Cucsat.G15098.T6 vs. NCBI nr
Match: XP_038893249.1 (protein RDM16 isoform X1 [Benincasa hispida])

HSP 1 Score: 1587 bits (4108), Expect = 0.0
Identity = 859/923 (93.07%), Postives = 892/923 (96.64%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDR+SEKEKSSKRSREERDRDHKHRSRDTE+KH SKDEKHRESD HHRRRHHRSDRDSKR
Sbjct: 1   MDRLSEKEKSSKRSREERDRDHKHRSRDTEEKHFSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEPREHKHRRD SPDER SSQDRDFKRERS++LREERERSRDRDSSKRE+SNEPRGL
Sbjct: 61  ERSHEPREHKHRRDRSPDERGSSQDRDFKRERSHDLREERERSRDRDSSKRERSNEPRGL 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           R GSEERGKLREVRRE+S++E EREGS EPI NSV  NKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 RAGSEERGKLREVRREQSEDEREREGSLEPIHNSVGSNKRKKRGGSEDRFDGGEKRARAS 180

Query: 181 EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG 240
           E GNEVNGAEMDEKKERRRFAD EKDE ANLSGRGRR+RKRFEDR KEEDNGGNVDE+H 
Sbjct: 181 EGGNEVNGAEMDEKKERRRFADSEKDEEANLSGRGRRERKRFEDRVKEEDNGGNVDERHA 240

Query: 241 KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS 300
           KVNE KSKGDVGD KVQFGGTTDEK SLGNGSMVEPTDM S SVPQNL+HPSHSLPIKVS
Sbjct: 241 KVNELKSKGDVGDVKVQFGGTTDEKGSLGNGSMVEPTDMSSTSVPQNLIHPSHSLPIKVS 300

Query: 301 SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360
           SISTTNEN+GVSITRSHEVHGKSSTDGTS+TAGKSGNLSLDALAKAKKALQMQKELAEKL
Sbjct: 301 SISTTNENKGVSITRSHEVHGKSSTDGTSATAGKSGNLSLDALAKAKKALQMQKELAEKL 360

Query: 361 KRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA 420
           K+IPLMKKVGGSSSA+SSV+K EEK KPP+G+LG L TTNDAT+LSTGV SSSSTLPSAA
Sbjct: 361 KKIPLMKKVGGSSSASSSVMKLEEKPKPPAGVLGQLPTTNDATSLSTGVASSSSTLPSAA 420

Query: 421 NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK 480
           NALDGGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+ATDVAVPQK
Sbjct: 421 NALDGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQK 480

Query: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540
           PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN
Sbjct: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540

Query: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK 600
           PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAET+KL+SKFGEAQAKER+EKQAQLAK
Sbjct: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLKSKFGEAQAKERKEKQAQLAK 600

Query: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK 660
           AKAAPDINPNLIEVSERV+KEKTK+PIPEIEWWDVPLL SG Y+D+GDGFVADDKLRKDK
Sbjct: 601 AKAAPDINPNLIEVSERVMKEKTKEPIPEIEWWDVPLLHSGTYEDVGDGFVADDKLRKDK 660

Query: 661 ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720
           ITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK
Sbjct: 661 ITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720

Query: 721 PKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKL 780
           PKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAERREKKERKL
Sbjct: 721 PKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL 780

Query: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840
           FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK
Sbjct: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840

Query: 841 RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900
           RY KLMLRRINWAASVKEEEEEENDD+P+NKCSLVWQGSVAKSSFNRFSIQECMTEAAAR
Sbjct: 841 RYGKLMLRRINWAASVKEEEEEENDDRPVNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900

Query: 901 KIFADAGVGHYWDFAINFSDDQL 923
           KIFADAGVGHYWDFA+N+SDDQ+
Sbjct: 901 KIFADAGVGHYWDFAVNYSDDQI 923

[Close]

BLAST of Cucsat.G15098.T6 vs. NCBI nr
Match: XP_022139030.1 (protein RDM16 isoform X1 [Momordica charantia])

HSP 1 Score: 1490 bits (3857), Expect = 0.0
Identity = 821/934 (87.90%), Postives = 866/934 (92.72%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDRVSEKEKSSKRSR+ERDRD KHRSRD ++KH SKDEKHRESD HHRRRHHRSDRDSKR
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEP +HKHRRD SPDE ESSQD DFKRERSY+LR+ERERSRDRDSSKRE+SNEPR  
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           REGS+ERGKLRE RRE+SD+E EREGSFEPIQN+VR NKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180

Query: 181 EVGN---------EVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDN 240
           E G          EVNGAEMDEKKERRRFADGEKD+ ANLSGRGRR+RKRFED   EEDN
Sbjct: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEEDN 240

Query: 241 GGNVDEKHGKVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHP 300
           GGNVDEKH  VN++KSKG+VGDGK+Q GGTTD   SLGNGS VEP DM SASVPQ+L+HP
Sbjct: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVS-SLGNGSTVEPIDMSSASVPQSLVHP 300

Query: 301 SHSLPIKVSSISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQ 360
           SHS+PIKVSSISTTNEN+GVSITRSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 420
           MQKELAEKLK+IPLMKK GGSSSA+SSVVK E+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420

Query: 421 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 480
           SSSTLP+A N   GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 421 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480

Query: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 660
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 660

Query: 661 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA+DK+RKDKITIYVEHPRPIEPP EPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 900
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

[Close]

BLAST of Cucsat.G15098.T6 vs. NCBI nr
Match: XP_022139031.1 (protein RDM16 isoform X2 [Momordica charantia])

HSP 1 Score: 1481 bits (3833), Expect = 0.0
Identity = 817/934 (87.47%), Postives = 862/934 (92.29%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDRVSEKEKSSKRSR+ERDRD KHRSRD ++KH SKDEKHRESD HHRRRHHRSDRDSKR
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEP +HKHRRD SPDE ESSQD DFKRERSY+LR+ERERSRDRDSSKRE+SNEPR  
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           REGS+ERGKLRE RRE+SD+E EREGSFEPIQN+VR NKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180

Query: 181 EVGN---------EVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDN 240
           E G          EVNGAEMDEKKERRRFADGEKD+ ANLSGRGRR+RKRFED   EEDN
Sbjct: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEEDN 240

Query: 241 GGNVDEKHGKVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHP 300
           GGNVDEKH  VN++KSKG+VGDGK+Q GGTTD       GS VEP DM SASVPQ+L+HP
Sbjct: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTD-------GSTVEPIDMSSASVPQSLVHP 300

Query: 301 SHSLPIKVSSISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQ 360
           SHS+PIKVSSISTTNEN+GVSITRSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 420
           MQKELAEKLK+IPLMKK GGSSSA+SSVVK E+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420

Query: 421 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 480
           SSSTLP+A N   GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 421 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480

Query: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 660
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 660

Query: 661 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA+DK+RKDKITIYVEHPRPIEPP EPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 900
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 927

[Close]

BLAST of Cucsat.G15098.T6 vs. ExPASy TrEMBL
Match: A0A0A0KLQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1)

HSP 1 Score: 1696 bits (4391), Expect = 0.0
Identity = 921/923 (99.78%), Postives = 921/923 (99.78%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL
Sbjct: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG 240
           EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG
Sbjct: 181 EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG 240

Query: 241 KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS 300
           KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS
Sbjct: 241 KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS 300

Query: 301 SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360
           SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL
Sbjct: 301 SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360

Query: 361 KRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA 420
           KRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA
Sbjct: 361 KRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA 420

Query: 421 NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK 480
           NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK
Sbjct: 421 NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK 480

Query: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540
           PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN
Sbjct: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540

Query: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK 600
           PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK
Sbjct: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK 600

Query: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK 660
           AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK
Sbjct: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK 660

Query: 661 ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720
           ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK
Sbjct: 661 ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720

Query: 721 PKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKL 780
           PKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAERREKKERKL
Sbjct: 721 PKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL 780

Query: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840
           FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK
Sbjct: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840

Query: 841 RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900
           RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR
Sbjct: 841 RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900

Query: 901 KIFADAGVGHYWDFAINFSDDQL 923
           KIFADAGVGHYWDFAINFSDDQL
Sbjct: 901 KIFADAGVGHYWDFAINFSDDQL 923

[Close]

BLAST of Cucsat.G15098.T6 vs. ExPASy TrEMBL
Match: A0A5A7SXX5 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00020 PE=4 SV=1)

HSP 1 Score: 1639 bits (4244), Expect = 0.0
Identity = 892/923 (96.64%), Postives = 904/923 (97.94%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEPREHKHRRD SPDERE SQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL
Sbjct: 61  ERSHEPREHKHRRDRSPDEREGSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           REGSEERGKLREVRREESDNE EREGSFEPIQNSVR NKRKERGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEREREGSFEPIQNSVRSNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG 240
           EVGNEVNGAEMDEKKERRRFADGEKD+GANLSGR RRDRKRFEDR KEEDNGGNVDEKH 
Sbjct: 181 EVGNEVNGAEMDEKKERRRFADGEKDDGANLSGRARRDRKRFEDRVKEEDNGGNVDEKHA 240

Query: 241 KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS 300
           KV EYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTD+PSASVPQNLLHPS SLPIKVS
Sbjct: 241 KVIEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDIPSASVPQNLLHPSPSLPIKVS 300

Query: 301 SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360
           SISTTNEN+GVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL
Sbjct: 301 SISTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360

Query: 361 KRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA 420
           K+IPLMKKVGGSSSANSSVVK EEKAKPPSG+LG LSTTNDATTLSTGVVSSSST PSAA
Sbjct: 361 KKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVSSSSTFPSAA 420

Query: 421 NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK 480
           NALD GINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN+ATDVAVPQK
Sbjct: 421 NALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQK 480

Query: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540
           PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN
Sbjct: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540

Query: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK 600
           PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER+EKQAQLAK
Sbjct: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERKEKQAQLAK 600

Query: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK 660
           AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLL S  Y+DLGDGFVAD+KLRKDK
Sbjct: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGFVADEKLRKDK 660

Query: 661 ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720
           ITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK
Sbjct: 661 ITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720

Query: 721 PKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKL 780
           PKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAERREKKERKL
Sbjct: 721 PKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL 780

Query: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840
           FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK
Sbjct: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840

Query: 841 RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900
           RYAKLMLRRINWAASVKEEEEEE DDKP+NKCSLVWQGSVAKSSFNRFSIQECMTEAAAR
Sbjct: 841 RYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900

Query: 901 KIFADAGVGHYWDFAINFSDDQL 923
           KIFADAGVGHYWDFA+NFSDDQ+
Sbjct: 901 KIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of Cucsat.G15098.T6 vs. ExPASy TrEMBL
Match: A0A1S3CF39 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC103500170 PE=4 SV=1)

HSP 1 Score: 1639 bits (4244), Expect = 0.0
Identity = 892/923 (96.64%), Postives = 904/923 (97.94%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEPREHKHRRD SPDERE SQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL
Sbjct: 61  ERSHEPREHKHRRDRSPDEREGSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           REGSEERGKLREVRREESDNE EREGSFEPIQNSVR NKRKERGGSEDRFDGGEKRARAS
Sbjct: 121 REGSEERGKLREVRREESDNEREREGSFEPIQNSVRSNKRKERGGSEDRFDGGEKRARAS 180

Query: 181 EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG 240
           EVGNEVNGAEMDEKKERRRFADGEKD+GANLSGR RRDRKRFEDR KEEDNGGNVDEKH 
Sbjct: 181 EVGNEVNGAEMDEKKERRRFADGEKDDGANLSGRARRDRKRFEDRVKEEDNGGNVDEKHA 240

Query: 241 KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS 300
           KV EYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTD+PSASVPQNLLHPS SLPIKVS
Sbjct: 241 KVIEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDIPSASVPQNLLHPSPSLPIKVS 300

Query: 301 SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360
           SISTTNEN+GVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL
Sbjct: 301 SISTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL 360

Query: 361 KRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA 420
           K+IPLMKKVGGSSSANSSVVK EEKAKPPSG+LG LSTTNDATTLSTGVVSSSST PSAA
Sbjct: 361 KKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVSSSSTFPSAA 420

Query: 421 NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK 480
           NALD GINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN+ATDVAVPQK
Sbjct: 421 NALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQK 480

Query: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540
           PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN
Sbjct: 481 PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN 540

Query: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK 600
           PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER+EKQAQLAK
Sbjct: 541 PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERKEKQAQLAK 600

Query: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK 660
           AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLL S  Y+DLGDGFVAD+KLRKDK
Sbjct: 601 AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGFVADEKLRKDK 660

Query: 661 ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720
           ITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK
Sbjct: 661 ITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK 720

Query: 721 PKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKL 780
           PKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAERREKKERKL
Sbjct: 721 PKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL 780

Query: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840
           FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK
Sbjct: 781 FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK 840

Query: 841 RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900
           RYAKLMLRRINWAASVKEEEEEE DDKP+NKCSLVWQGSVAKSSFNRFSIQECMTEAAAR
Sbjct: 841 RYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR 900

Query: 901 KIFADAGVGHYWDFAINFSDDQL 923
           KIFADAGVGHYWDFA+NFSDDQ+
Sbjct: 901 KIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of Cucsat.G15098.T6 vs. ExPASy TrEMBL
Match: A0A6J1CB57 (protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1490 bits (3857), Expect = 0.0
Identity = 821/934 (87.90%), Postives = 866/934 (92.72%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDRVSEKEKSSKRSR+ERDRD KHRSRD ++KH SKDEKHRESD HHRRRHHRSDRDSKR
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEP +HKHRRD SPDE ESSQD DFKRERSY+LR+ERERSRDRDSSKRE+SNEPR  
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           REGS+ERGKLRE RRE+SD+E EREGSFEPIQN+VR NKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180

Query: 181 EVGN---------EVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDN 240
           E G          EVNGAEMDEKKERRRFADGEKD+ ANLSGRGRR+RKRFED   EEDN
Sbjct: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEEDN 240

Query: 241 GGNVDEKHGKVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHP 300
           GGNVDEKH  VN++KSKG+VGDGK+Q GGTTD   SLGNGS VEP DM SASVPQ+L+HP
Sbjct: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVS-SLGNGSTVEPIDMSSASVPQSLVHP 300

Query: 301 SHSLPIKVSSISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQ 360
           SHS+PIKVSSISTTNEN+GVSITRSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 420
           MQKELAEKLK+IPLMKK GGSSSA+SSVVK E+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420

Query: 421 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 480
           SSSTLP+A N   GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 421 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480

Query: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 660
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 660

Query: 661 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA+DK+RKDKITIYVEHPRPIEPP EPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 900
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

[Close]

BLAST of Cucsat.G15098.T6 vs. ExPASy TrEMBL
Match: A0A6J1CBF9 (protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1481 bits (3833), Expect = 0.0
Identity = 817/934 (87.47%), Postives = 862/934 (92.29%), Query Frame = 0


Query: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60
           MDRVSEKEKSSKRSR+ERDRD KHRSRD ++KH SKDEKHRESD HHRRRHHRSDRDSKR
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120
           ERSHEP +HKHRRD SPDE ESSQD DFKRERSY+LR+ERERSRDRDSSKRE+SNEPR  
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS 180
           REGS+ERGKLRE RRE+SD+E EREGSFEPIQN+VR NKRK+RGGSEDRFDGGEKRARAS
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRSNKRKDRGGSEDRFDGGEKRARAS 180

Query: 181 EVGN---------EVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDN 240
           E G          EVNGAEMDEKKERRRFADGEKD+ ANLSGRGRR+RKRFED   EEDN
Sbjct: 181 EDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEEDN 240

Query: 241 GGNVDEKHGKVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHP 300
           GGNVDEKH  VN++KSKG+VGDGK+Q GGTTD       GS VEP DM SASVPQ+L+HP
Sbjct: 241 GGNVDEKHANVNKHKSKGNVGDGKIQIGGTTD-------GSTVEPIDMSSASVPQSLVHP 300

Query: 301 SHSLPIKVSSISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQ 360
           SHS+PIKVSSISTTNEN+GVSITRSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKALQ
Sbjct: 301 SHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQ 360

Query: 361 MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 420
           MQKELAEKLK+IPLMKK GGSSSA+SSVVK E+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 361 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 420

Query: 421 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 480
           SSSTLP+A N   GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 421 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 480

Query: 481 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 481 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 540

Query: 541 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 600
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 541 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 600

Query: 601 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 660
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 601 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 660

Query: 661 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VA+DK+RKDKITIYVEHPRPIEPP EPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 781 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 900
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 841 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 900

Query: 901 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 901 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 927

The following BLAST results are available for this feature:

BLAST of Cucsat.G15098.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E7	3.1e-210	55.62	Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1	[more]
Q5ZJ85	1.9e-74	38.31	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=...	[more]
Q922U1	2.1e-68	33.86	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=...	[more]
Q2KIA6	3.5e-68	33.65	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 S...	[more]
O43395	3.5e-68	33.28	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1...	[more]

BLAST of Cucsat.G15098.T6 vs. NCBI nr


Match Name	Identity	Description
XP_004143591.1	99.78	protein RDM16 isoform X1 [Cucumis sativus] >KGN50493.1 hypothetical protein Csa_...	[more]
XP_008461606.1	96.64	PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo] >KAA0034019...	[more]
XP_038893249.1	93.07	protein RDM16 isoform X1 [Benincasa hispida]	[more]
XP_022139030.1	87.90	protein RDM16 isoform X1 [Momordica charantia]	[more]
XP_022139031.1	87.47	protein RDM16 isoform X2 [Momordica charantia]	[more]

BLAST of Cucsat.G15098.T6 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KLQ4	99.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1	[more]
A0A5A7SXX5	96.64	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CF39	96.64	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC1035001...	[more]
A0A6J1CB57	87.90	protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CBF9	87.47	protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 685..707
None	No IPR available	COILS	Coil	Coil	coord: 340..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 671..707
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..399
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 687..707
None	No IPR available	PANTHER	PTHR14212:SF2	SUBFAMILY NOT NAMED	coord: 70..923
IPR010541	Domain of unknown function DUF1115	PFAM	PF06544	DUF1115	coord: 793..915 e-value: 1.9E-40 score: 138.4
IPR013881	Pre-mRNA-splicing factor 3	PFAM	PF08572	PRP3	coord: 540..768 e-value: 5.9E-62 score: 209.3
IPR027104	U4/U6 small nuclear ribonucleoprotein Prp3	PANTHER	PTHR14212	U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED	coord: 70..923

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G15098	Cucsat.G15098	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15098.T6.E1	Cucsat.G15098.T6.E1	exon
Cucsat.G15098.T6.E2	Cucsat.G15098.T6.E2	exon
Cucsat.G15098.T6.E3	Cucsat.G15098.T6.E3	exon
Cucsat.G15098.T6.E4	Cucsat.G15098.T6.E4	exon
Cucsat.G15098.T6.E5	Cucsat.G15098.T6.E5	exon
Cucsat.G15098.T6.E6	Cucsat.G15098.T6.E6	exon
Cucsat.G15098.T6.E7	Cucsat.G15098.T6.E7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15098.T6.C6	Cucsat.G15098.T6.C6	CDS
Cucsat.G15098.T6.C5	Cucsat.G15098.T6.C5	CDS
Cucsat.G15098.T6.C4	Cucsat.G15098.T6.C4	CDS
Cucsat.G15098.T6.C3	Cucsat.G15098.T6.C3	CDS
Cucsat.G15098.T6.C2	Cucsat.G15098.T6.C2	CDS
Cucsat.G15098.T6.C1	Cucsat.G15098.T6.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15098.T6	Cucsat.G15098.T6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex