Cucsat.G15098 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15098
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein RDM16 isoform X2
Location	ctg197: 532572 .. 536661 (-)
RNA-Seq Expression	Cucsat.G15098
Synteny	Cucsat.G15098

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGTAGATAGAGCGAAACCCTAGAGAGAGAGGAAGACGAAGAAGAAGGAGAAGAAGAAGAGGAAGAAATTCAAGTTCAGAGCCTTTGGAGCCCTGGAAATGGATAGGGTTTCCGAGAAGGAGAAATCAAGCAAGCGTTCTAGAGAAGAACGCGATCGAGACCACAAGCATCGAAGTCGGGATACCGAGGATAAGCATTTATCCAAGGATGAAAAGCATCGTGAATCCGATCGCCACCATCGCCGGCGACACCATCGATCGGACCGTGATTCGAAGCGTGAGCGTTCGCATGAGCCTCGTGAACACAAACATCGGCGTGATATGTCTCCTGATGAGCGTGAAAGCTCCCAAGACCGCGATTTTAAGCGGGAAAGGTCTTATGAACTTAGGGAGGAGAGAGAAAGAAGTAGGGATAGGGATTCGTCTAAGCGAGAGAAGTCGAATGAACCGAGAGGATTGAGAGAAGGCAGCGAAGAGCGTGGCAAGCTGCGTGAGGTGAGGCGCGAGGAATCAGACAATGAGCATGAACGGGAAGGGTCGTTCGAGCCTATTCAAAATTCCGTACGTCCAAACAAGAGGAAGGAGAGGGGAGGAAGTGAGGATAGATTTGATGGTGGGGAGAAGAGGGCCAGGGCTTCGGAAGTTGGGAATGAAGTGAATGGAGCTGAGATGGATGAGAAAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGACGAAGGAGCAAACTTGAGTGGTCGGGGAAGGAGGGACAGGAAGCGGTTTGAGGATCGAGGGAAGGAAGAAGATAATGGTGGAAATGTTGATGAGAAGCATGGGAAAGTGAATGAATACAAGTCCAAAGGAGACGTTGGGGATGGGAAAGTTCAGTTTGGAGGCACCACCGATGAAAAAAGGTCACTGGGGAATGTAAGTTTACATTCCATTTTGCGTATGCTGTATTTTATCACAATGAATTACAGTACTAAAATTTCTTCATACATCATGGGCATCAGTTTGTAGAACCGACAATTGTTCGCTAGAGCCTGTTTGTCAACCATTTCGTTATAAACACTATTTCCCCCCTGTTAGTTTCTTTCTACGTTGGCTAAATTTTATGTGAACCAAGTTTTGAAAACTAAAAATTTGCTGTTTCTTAGAATTTGTCTGAGAATTCAAATGTTCTCTCGGGATGATGAAAACCTTGATTAAGAATTTTCTGAGCAAAATACAATCTCAAAAAACCAAATGGTTATCAAATGGGCTCTAGAAATCAAGTTCTGCCATATATCATTGTGTTTTACTATTGTACATTTCATTTGGCAATTCATCCTAGTATCACTTTGTTTTCAATCATCAATGGTTGGGAAAGCGTTTCTTGTTTACGAAAAATGGAACCAAGTACATTTTAGGAGACTTCCAGAGTTACTTTATCTCTTCGGAATTTCCTTGCTGACGAGTGACTTCACACTTCTTTTGCTACTTTCTGTTGTTTCTCCCCCTTAGGCTTAGGTCACTACTTGGGCTTGCCGCTTGTGCCCGCTCTAACATCCCTTATAATTAATGTCCTCGCTTGGCATTCCTTTCTTTCCTCCCTTTCTGACAATAACTAAGTCCTTATCTTCTTGAATTGACAGGAAATTTGCATGTATATATACATACATATAAATATATAATGTGATTGTGTTGGTCCATTAGGGTGTTCTCGTTTGTTTTTTGTTTCTTCAATAAAGGGGTTTCTCGTATAATATGTATATATACATATATATATGTGATCATCATTGTGTGACCTCTAGGCTTGAAATTTTATTTTTGGGAGGCAGTTTCATGTGAGGAAACTCATATCTCTATAAACATTATGAAGCCTAAGAATTGTCATTGCTAGGATGTGCACTATTTGTGGGATCTTGAATTTTTTAGTTGTGAACAAATTATGTTCACAGGTCTTGTTGTAATATGGTGCTGTTCGTAGATGGGTATAAGCTCAAGAATTTTATTTGATTATGTTATGCTAATTAAAGTCACCAAAATGGATTTTGTTAGTTTAAGCTTTATGGTGTGTTTCAAACAATTTATCTTCCAAGTCAGAACATTTATTCATTCTTTGGTATATTAAGCATCTTGGCAATTTTCTAGCCAGTAGCTTTGAAGTGGGAGTGAGTTTGAGTGTTGTTTGACATTTGTTGGATGTAAAGAGCTGACATATTTTGTAATTTTGTTAATTGTTTGGTTTATAATGCACACCCTCGTTCAAGGTTCCTTATAGTGATTCTTACCTTCTCTTCATCTTTTAATCTGTATACATGGGTTAATTCTATAATATTGAGGAAGGTCTTCCATGATTATGATGCCTTTGGGTAGTGCTAGACTGCTAGTAATGAACTTAATGAACTGAAGTCATAATCATGCAGGGATCTATGGTGGAACCTACCGATATGCCATCAGCAAGTGTGCCCCAGAATTTGTTACATCCTAGTCATTCCCTTCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAGGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGACATCCTCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCGGAGAAGTTGAAGAGAATTCCCCTGGTAAGTTAGGCAACAGAGATACTTTGATCCATGCTAGCTAGTTTCCCGCACTTTGATGTTGGTTTTACATATACATGGATGCATATGCGCATGTGTGTATTCGGTTTTTCTTCTGTGTATCAAGTGTTACTATTTGATCTTATAGATGAAGAAGGTTGGGGGTTCAAGTTCTGCTAATAGCTCAGTTGTGAAATCGGAGGAGAAAGCTAAACCTCCCAGTGGTATATTGGGTCCACTGTCAACTACCAATGATGCTACAACTCTTTCAACTGGGGTAGTGTCTAGTTCGTCGACATTACCTTCTGCTGCCAATGCTCTTGATGGTGGTATTAATGTTCCGGCTGGCCTTACCTCTATACCCCATATTGAAGCTGTTAAGCGTGCTCAGGAGCTCGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTTATAAATTTGTTTCCAGGGAATGTAGCAACTGACGTTGCTGTTCCACAGAAACCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGTAGGGAAATTGACGAACAAGGAAATGTAGTCAATATAACCAAACCCAGCAACCTTAGCACTCTTAAGGTTTGGAATGAACTTACATCTCTTTCGGAGGTTTTTTTCTTCTTTTATTAGCATTGAATTTTGAATAGATTGACCTTGTATACATTTCTAACTTCGCAGGTTAACATCAACAAACAAAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGATGTGGATCCAGATTCAAACCCTCATTTTGATGAGAGAATGGGTATAAATAAAACTAAACTGCTGAGGCCAAAGAGAATGAGTTTCCAGTTCGTTGAGGAAGGGAAATGGTCGAAGGAGGCTGAAACCTTAAAATTGAGGGTACTTATAGTTTCTTTCATAGTTGTCTTTGGTGAAAGAATGCTTGCATACTTATTTGTTAAATAAAATTCTTATATTTCTGCTATAGAGTAAATTTGGAGAGGCACAAGCGAAAGAACGAAGAGAAAAGCAGGCACAGTTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCAAATTTGATCGAGGTTTCAGAGAGAGTGGTGAAGGAAAAAACAAAAGACCCAATTCCTGAAATTGAGTGGTGGTAAGCTGATATTTTCTATTATGGTATTTCTTGAACTGTCTTATTTTACTTTTTATGTAAAAATTTGTAAGCTAAGAGTTGAGCAGACTGTATCTTTTCCCGTTCTCCTCTTGCAGTTATTTTAATTTTCTAGCATTTTGTTAATGTCTAGCTTTTAATGGGATGGCTTTGGATATTCAATTCTAATATATAATTTTTAAAAAAAATATCTAGGGATGTCCCGCTTTTGCAATCCGGTGCGTACAAGGATTTGGGAGATGGTTTTGTGGCCGATGACAAATTGAGAAAGGACAAGATTACCATATACGTGGAGCATCCTCGTCCTATTGAACCTCCTGCCGAGCCAGCTCTCCCCCCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGTACACAGCGTCGTCTAGCAAAGGAGAAAGATAGACAGGAAATGATTAGACAAGGCCTGATAGAACCACCTAAACCGAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTTGAGAAAGAGATTTGTGCTGCAGCTGCTGAGAGGGAGCAAGCTCACATAGATCGAAATATTGCACGAAAACTCACCCCTGCAGAGCGCCGTGAGAAGAAAGAACGTAAACTATTTGACGATTCAAATTCACTCGAGACATTTGTGTCTGTTTACAAGATCAACGATCTATCACACCCCCAGGCCCGGTTTAAAGTTGACGTTAATGCTAGAGAGAACCGATTGACAGGGTGTGCTGTGATATGCGATGGCATCAGTGTTCTGGTCGTTGAAGGGGGTAGCAAGTCCATCAAGAGGTACGCAAAACTTATGCTCAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGAGGAAAATGACGATAAACCCCTTAACAAATGTTCCTTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAATAGATTTTCCATCCAGGAGTGCATGACTGAGGCAGCTGCTAGGAAGATTTTCGCTGATGCCGGTGTCGGTCATTACTGGGATTTTGCTATTAACTTCTCCGACGATCAATTATAATTCAACTTCTGCACTGTTAGTTGATGCGAATTGCTGATGATTTACTTCAGGTCAAGAAGCAAGAAATGCAGAAATGTTAAAAGCCTATATATCATCACGGTATTGCCGGTCTTACTTGTTTCTATTAATTGGTTAGGTGGGAAGATTTCATTATGTTCCAGCTCACTTTTTCCACAAGTTCCTGGGAATTTTTCGGATTTCATGAGTTGCAACCAACATCATCTGTATGGGAAATATGTTTGTAGTAGTTGGTGATCAGTTGGTATCGCCCAAGACCACCATCTTCAAGAAACGGGTATTGTGTCCAATATTCGTCTTATAGTCTTCATTTCCTTGTAGTTTTATAGAATCTAGAGTTGTGTTTCTTTCTCTTTTCTCCACCCTTCATAAGTGAGGAATGTTTGACAAATCCACTCGGTTGGGTAGTTAAATGAAGGAAGGTGGCTTTAAATAACTTTCTACTCAAACAAAGAGGTACCCTTTTTACTAATTAATTTCCGCACGGTTATTGTGAAAACTCTATACTGGTTCTTCCTTGTTTTATCTTCTTGTTTCTTCTCAATTGTAGGTTCATAGGAGATTTGAACCCATGGCGAAAAAGCTCTGACCAATTGAATTTCATCGGTTGAGTTTGTGATTAAGGGTGAGTGAGTTTGATAATATCCATTCCCACAAATGTCTTTTCATTTTAGTAAAATTTTACACCATTTCCTGGATTTTCAAATGATTATAGTAATAAACACATTCTAGTTGAAGGTGTTTTGTAGTATATCTTTTTCGAGGTTTGGTTCTATAATGCTTTTGAAGTTGTGTGTCGAATCAATACAACTTTTAAAATGCTCCCTCTCTATCCTTCTTTTTGCTTTTATACATTGAAATTTTCTGGGCTCATTTTTTAATTATACTGCCGGTAACTATTTGGGTTCCCATTTGGTAACTGTCTTTGATCTTTTGCTTTCTTCCAACTTCTTACTACTTGTTTCTATATTTTCTATTTTAACATTTTAGTTCTTTAACCAATTTTCAAAAACAAAATCATATTTTTTATAACAGTTACTTTTGGTTTTCAAAATTTGGCTTTGGGAACAATAAAACATAAAAATCAGTAGTTTAAAGTGGTGTTTATAGGATTGATTTTCAAGAAGAAAAAAAAACAAAATCATATCAGATCAATTCTTTTCTTTCCATTTCTTATAATGATTCAAGTATTAATCAAATTTAAAATAAAAACAGAGTGAGGGGAGGCTTATTAAGTATAGAAAAATGGGTTCAATTACTTTTAGGTTTAGCAAAAACTTCCTACATTTTTTACCTTTCACGTTGATAGAAGATAGAATCTGTCTGTAGTAGAAATTCATAAAAGTGTATCATTGATAGGTGAAGCTTATAGTAGCTTCTTATTGGTACTATCATTAACATGAATTTAGTGTCATTTAGTGATAGAAACTTGTAGCAATCTATTAATACTATCAGTAACATTAATTGATAAACTTCTCGTCCATTTTCGTTCATTTGTATTTAAATTTATAAGTCTACTAGTGTTTATTGTATTTTTGGAAGTTTTTCTATTTATCAAAATTTCTTATGTACCGAGTACATGGATTTTAAATTTTCTTTGTAACTTTTTAAATTTTTTTGG

Coding sequence (CDS)

ATGAATACAAGTCCAAAGGAGACGTTGGGGATGGGAAAGTTCAGTTTGGAGGCACCACCGATGAAAAAAGGTCACTGGGGAATGGATCTATGGTGGAACCTACCGATATGCCATCAGCAAGTGTGCCCCAGAATTTGTTACATCCTAGTCATTCCCTTCCTATCAAGTACAGATGGGACATCCTCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCGGAGAAGTTGAAGAGAATTCCCCTGATGAAGAAGGTTGGGGGTTCAAGTTCTGCTAATAGCTCAGTTGTGAAATCGGAGGAGAAAGCTAAACCTCCCAGTGGTATATTGGGTCCACTGTCAACTACCAATGATGCTACAACTCTTTCAACTGGGGTAGTGTCTAGTTCGTCGACATTACCTTCTGCTGCCAATGCTCTTGATGGTGGTATTAATGTTCCGGCTGGCCTTACCTCTATACCCCATATTGAAGCTGTTAAGCGTGCTCAGGAGCTCGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTTATAAATTTGTTTCCAGGGAATGTAGCAACTGACGTTGCTGTTCCACAGAAACCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGTAGGGAAATTGACGAACAAGGAAATGTAGTCAATATAACCAAACCCAGCAACCTTAGCACTCTTAAGGTTAACATCAACAAACAAAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGATGTGGATCCAGATTCAAACCCTCATTTTGATGAGAGAATGGGTATAAATAAAACTAAACTGCTGAGGCCAAAGAGAATGAGTTTCCAGTTCGTTGAGGAAGGGAAATGGTCGAAGGAGGCTGAAACCTTAAAATTGAGGAGTAAATTTGGAGAGGCACAAGCGAAAGAACGAAGAGAAAAGCAGGCACAGTTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCAAATTTGATCGAGGTTTCAGAGAGAGTGGTGAAGGAAAAAACAAAAGACCCAATTCCTGAAATTGAGTGGTGGGATGTCCCGCTTTTGCAATCCGGTGCGTACAAGGATTTGGGAGATGGTTTTGTGGCCGATGACAAATTGAGAAAGGACAAGATTACCATATACGTGGAGCATCCTCGTCCTATTGAACCTCCTGCCGAGCCAGCTCTCCCCCCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGTACACAGCGTCGTCTAGCAAAGGAGAAAGATAGACAGGAAATGATTAGACAAGGCCTGATAGAACCACCTAAACCGAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTTGAGAAAGAGATTTGTGCTGCAGCTGCTGAGAGGGAGCAAGCTCACATAGATCGAAATATTGCACGAAAACTCACCCCTGCAGAGCGCCGTGAGAAGAAAGAACGTAAACTATTTGACGATTCAAATTCACTCGAGACATTTGTGTCTGTTTACAAGATCAACGATCTATCACACCCCCAGGCCCGGTTTAAAGTTGACGTTAATGCTAGAGAGAACCGATTGACAGGGTGTGCTGTGATATGCGATGGCATCAGTGTTCTGGTCGTTGAAGGGGGTAGCAAGTCCATCAAGAGGTACGCAAAACTTATGCTCAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGAGGAAAATGACGATAAACCCCTTAACAAATGTTCCTTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAATAGATTTTCCATCCAGGAGTGCATGACTGAGGCAGCTGCTAGGAAGATTTTCGCTGATGCCGGTGTCGGTCATTACTGGGATTTTGCTATTAACTTCTCCGACGATCAATTATAA

Protein sequence

MNTSPKETLGMGKFSLEAPPMKKGHWGMDLWWNLPICHQQVCPRICYILVIPFLSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARKIFADAGVGHYWDFAINFSDDQL

Homology

[Close]

BLAST of Cucsat.G15098 vs. ExPASy Swiss-Prot
Match: Q9C7E7 (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 3.8e-198
Identity = 374/573 (65.27%), Postives = 449/573 (78.36%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           +QK LA++LK +PL+KK            K   +  P + +  P STT  A  +STG  S
Sbjct: 240 LQKGLADRLKNLPLLKK----------ATKPTSEGSPHTRV--PPSTTTPA--VSTG-TS 299

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
            +STLP             AG  SI +IEAVKRAQELAA MGF QD EFAP+INLFPG  
Sbjct: 300 FASTLPHTG---------LAGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQA 359

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
            +D+ V Q+P K PVLR+DALGREIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP
Sbjct: 360 PSDMTVAQRPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKP 419

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           +L+ D   NP+FD RMGI++ K+LRPKRMSFQFVEEGKW+++AE LK +S FGEA+AKE 
Sbjct: 420 QLEADLKENPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKEL 479

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVV-KEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 300
           + KQAQLAKA    DINPNLIEVSERV  KEK K+PIP++EWWD  +L +G Y ++ DG 
Sbjct: 480 KVKQAQLAKAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGT 539

Query: 301 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           + +  L+ +K+T Y+EHPRPIEPPAE A PPPQPLKLTKKEQKKLRTQRRLAKEK++QEM
Sbjct: 540 ITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEM 599

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 420
           IRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEI  AAAEREQAH DRN ARKLTPA
Sbjct: 600 IRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPA 659

Query: 421 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           E+REKKERKLFDD  ++ET VSVYKI  LSHP+ RFKV++NARENRLTGC+V+ D +SV+
Sbjct: 660 EKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVV 719

Query: 481 VVEGGSKSIKRYAKLMLRRINWAASVKEE--EEEENDDKPLNKCSLVWQGSVAKSSFNRF 540
           VVEG SK+IKRY KLM++RINW  + ++E  E+EE +    NKC LVWQGS+ K SF+RF
Sbjct: 720 VVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRF 779

Query: 541 SIQECMTEAAARKIFADAGVGHYWDFAINFSDD 571
            + EC+TE+ A+K+F DAGV HYWD A+N+SDD
Sbjct: 780 HVHECVTESTAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of Cucsat.G15098 vs. ExPASy Swiss-Prot
Match: Q5ZJ85 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-74
Identity = 190/496 (38.31%), Postives = 282/496 (56.85%), Query Frame = 0


Query: 88  IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 147
           IE  ++A EL AR+        G   +     L NL    +A      +  TK   L LD
Sbjct: 200 IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILD 259

Query: 148 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHFDERMGI 207
             GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN +FD R+ I
Sbjct: 260 EQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDLRVSI 319

Query: 208 NKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 267
             T   R KR +F+F E+GK+ K A+ L+ +++         ++ QA++++A     I+ 
Sbjct: 320 --TPAQRQKR-TFKFHEKGKFEKIAQRLRTKAQL--------KKLQAEISQAARKTGIHT 379

Query: 268 NLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDKITIYVEHPR 327
           +         KE  +  IPEIEWWD  ++ +G   DL  G  +  K     IT  VEHP 
Sbjct: 380 STKLALITPKKELKEGEIPEIEWWDSYIIPNGL--DLKGG-TSSKKDEYFGITNLVEHPA 439

Query: 328 PIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 387
            + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM
Sbjct: 440 QLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLM 499

Query: 388 KVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSLET 447
           +VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL +D  S   
Sbjct: 500 RVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKIKKLKEDV-SQGV 559

Query: 448 FVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLMLRR 507
            ++VY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML R
Sbjct: 560 HIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHR 619

Query: 508 INW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARKIF 567
           I W    ++ K E+++E+D+   K  NKCSLVW+G+    SF     ++C TE  AR+ F
Sbjct: 620 IKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHF 678

Query: 568 ADAGVGHYWDFAINFS 569
              G  HYWD A++ S
Sbjct: 680 KKHGAEHYWDLALSES 678

[Close]

BLAST of Cucsat.G15098 vs. ExPASy Swiss-Prot
Match: O43395 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-72
Identity = 187/498 (37.55%), Postives = 282/498 (56.63%), Query Frame = 0


Query: 88  IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 147
           IE  ++A EL AR+        G   +     L NL    +A      +  TK   L LD
Sbjct: 200 IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILD 259

Query: 148 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHFDERMGI 207
             GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN  FD R+ I
Sbjct: 260 EQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSI 319

Query: 208 NKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 267
             +   + +R +F+F ++GK+ K A+ L+ +++  + QA      +   A  K     + 
Sbjct: 320 APS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTST 379

Query: 268 NLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKD--KITIYVEH 327
            L  ++ +  KE  +  IPEIEWWD  ++ +G   DL +    ++  R+D   IT  VEH
Sbjct: 380 RLALIAPK--KELKEGDIPEIEWWDSYIIPNGF--DLTE----ENPKREDYFGITNLVEH 439

Query: 328 PRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 387
           P  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SN
Sbjct: 440 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN 499

Query: 388 LMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSL 447
           LM+VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 500 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 559

Query: 448 ETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLML 507
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 560 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 619

Query: 508 RRINW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARK 567
            RI W    ++ K +++EE+D+   K  NKC LVW+G+    SF     ++C TE  AR+
Sbjct: 620 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 568 IFADAGVGHYWDFAINFS 569
            F   G  HYWD A++ S
Sbjct: 680 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of Cucsat.G15098 vs. ExPASy Swiss-Prot
Match: Q5R5F1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-72
Identity = 187/498 (37.55%), Postives = 282/498 (56.63%), Query Frame = 0


Query: 88  IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 147
           IE  ++A EL AR+        G   +     L NL    +A      +  TK   L LD
Sbjct: 200 IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILD 259

Query: 148 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHFDERMGI 207
             GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN  FD R+ I
Sbjct: 260 EQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFRQQLKEKPSEDMESNTFFDPRVSI 319

Query: 208 NKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 267
             +   + +R +F+F ++GK+ K A+ L+ +++  + QA      +   A  K     + 
Sbjct: 320 APS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTST 379

Query: 268 NLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKD--KITIYVEH 327
            L  ++ +  KE  +  IPEIEWWD  ++ +G   DL +    ++  R+D   IT  VEH
Sbjct: 380 RLALIAPK--KELKEGDIPEIEWWDSYIIPNGF--DLTE----ENPKREDYFGITNLVEH 439

Query: 328 PRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 387
           P  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SN
Sbjct: 440 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN 499

Query: 388 LMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSL 447
           LM+VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 500 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 559

Query: 448 ETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLML 507
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 560 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 619

Query: 508 RRINW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARK 567
            RI W    ++ K +++EE+D+   K  NKC LVW+G+    SF     ++C TE  AR+
Sbjct: 620 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 568 IFADAGVGHYWDFAINFS 569
            F   G  HYWD A++ S
Sbjct: 680 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of Cucsat.G15098 vs. ExPASy Swiss-Prot
Match: Q922U1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-72
Identity = 188/498 (37.75%), Postives = 281/498 (56.43%), Query Frame = 0


Query: 88  IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 147
           IE  ++A EL AR+        G   +     L NL    +A      +  TK   L LD
Sbjct: 200 IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILD 259

Query: 148 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHFDERMGI 207
             GR +D  G  V +T    + TLK NI   K++ F Q LK +   D +SN  FD R+ I
Sbjct: 260 EQGRTVDATGKEVELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSI 319

Query: 208 NKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 267
             +   + +R +F+F ++GK+ K A+ L+ +++  + QA      +   A  K     + 
Sbjct: 320 APS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTST 379

Query: 268 NLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKD--KITIYVEH 327
            L  ++ +  KE  +  IPEIEWWD  ++ +G   DL +    ++  R+D   IT  VEH
Sbjct: 380 RLALIAPK--KELKEGDIPEIEWWDSYIIPNGF--DLTE----ENPKREDYFGITNLVEH 439

Query: 328 PRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 387
           P  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL  PP+PKV++SN
Sbjct: 440 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLTPPPEPKVRISN 499

Query: 388 LMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSL 447
           LM+VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 500 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 559

Query: 448 ETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLML 507
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 560 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 619

Query: 508 RRINW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARK 567
            RI W    ++ K +++EE+D+   K  NKC LVW+G+    SF     ++C TE  AR+
Sbjct: 620 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 568 IFADAGVGHYWDFAINFS 569
            F   G  HYWD A++ S
Sbjct: 680 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of Cucsat.G15098 vs. NCBI nr
Match: XP_031741295.1 (protein RDM16 isoform X3 [Cucumis sativus])

HSP 1 Score: 1087 bits (2810), Expect = 0.0
Identity = 570/572 (99.65%), Postives = 570/572 (99.65%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLKRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVS
Sbjct: 64  MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 123

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV
Sbjct: 124 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 183

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 184 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 243

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 244 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 303

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV
Sbjct: 304 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 363

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 364 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 423

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 424 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 483

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 484 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 543

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 544 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 603

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFAINFSDDQL
Sbjct: 604 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 635

[Close]

BLAST of Cucsat.G15098 vs. NCBI nr
Match: XP_004143591.1 (protein RDM16 isoform X1 [Cucumis sativus] >KGN50493.1 hypothetical protein Csa_000308 [Cucumis sativus])

HSP 1 Score: 1087 bits (2810), Expect = 0.0
Identity = 570/572 (99.65%), Postives = 570/572 (99.65%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLKRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV
Sbjct: 412 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV
Sbjct: 592 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFAINFSDDQL
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923

[Close]

BLAST of Cucsat.G15098 vs. NCBI nr
Match: XP_031741294.1 (protein RDM16 isoform X2 [Cucumis sativus])

HSP 1 Score: 1087 bits (2810), Expect = 0.0
Identity = 570/572 (99.65%), Postives = 570/572 (99.65%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLKRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVS
Sbjct: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 60

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV
Sbjct: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV
Sbjct: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 420

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFAINFSDDQL
Sbjct: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572

[Close]

BLAST of Cucsat.G15098 vs. NCBI nr
Match: XP_008461606.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo] >KAA0034019.1 U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo var. makuwa])

HSP 1 Score: 1059 bits (2739), Expect = 0.0
Identity = 553/572 (96.68%), Postives = 562/572 (98.25%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKKVGGSSSANSSVVK EEKAKPPSG+LG LSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSST PSAANALD GINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 412 SSSTFPSAANALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           +EKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLL S  Y+DLGDGFV
Sbjct: 592 KEKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           AD+KLRKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADEKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEE DDKP+NKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFA+NFSDDQ+
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of Cucsat.G15098 vs. NCBI nr
Match: XP_038893249.1 (protein RDM16 isoform X1 [Benincasa hispida])

HSP 1 Score: 1048 bits (2710), Expect = 0.0
Identity = 542/572 (94.76%), Postives = 561/572 (98.08%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKKVGGSSSA+SSV+K EEK KPP+G+LG L TTNDAT+LSTGV S
Sbjct: 352 MQKELAEKLKKIPLMKKVGGSSSASSSVMKLEEKPKPPAGVLGQLPTTNDATSLSTGVAS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 412 SSSTLPSAANALDGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAET+KL+SKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLKSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           +EKQAQLAKAKAAPDINPNLIEVSERV+KEKTK+PIPEIEWWDVPLL SG Y+D+GDGFV
Sbjct: 592 KEKQAQLAKAKAAPDINPNLIEVSERVMKEKTKEPIPEIEWWDVPLLHSGTYEDVGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADDKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRY KLMLRRINWAASVKEEEEEENDD+P+NKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYGKLMLRRINWAASVKEEEEEENDDRPVNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFA+N+SDDQ+
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAVNYSDDQI 923

[Close]

BLAST of Cucsat.G15098 vs. ExPASy TrEMBL
Match: A0A0A0KLQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1)

HSP 1 Score: 1087 bits (2810), Expect = 0.0
Identity = 570/572 (99.65%), Postives = 570/572 (99.65%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLKRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV
Sbjct: 412 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV
Sbjct: 592 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFAINFSDDQL
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923

[Close]

BLAST of Cucsat.G15098 vs. ExPASy TrEMBL
Match: A0A5A7SXX5 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00020 PE=4 SV=1)

HSP 1 Score: 1059 bits (2739), Expect = 0.0
Identity = 553/572 (96.68%), Postives = 562/572 (98.25%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKKVGGSSSANSSVVK EEKAKPPSG+LG LSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSST PSAANALD GINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 412 SSSTFPSAANALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           +EKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLL S  Y+DLGDGFV
Sbjct: 592 KEKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           AD+KLRKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADEKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEE DDKP+NKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFA+NFSDDQ+
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of Cucsat.G15098 vs. ExPASy TrEMBL
Match: A0A1S3CF39 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC103500170 PE=4 SV=1)

HSP 1 Score: 1059 bits (2739), Expect = 0.0
Identity = 553/572 (96.68%), Postives = 562/572 (98.25%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKKVGGSSSANSSVVK EEKAKPPSG+LG LSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSST PSAANALD GINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 412 SSSTFPSAANALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           +EKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLL S  Y+DLGDGFV
Sbjct: 592 KEKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           AD+KLRKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADEKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEE DDKP+NKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFA+NFSDDQ+
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of Cucsat.G15098 vs. ExPASy TrEMBL
Match: A0A6J1CBS3 (protein RDM16 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 995 bits (2572), Expect = 0.0
Identity = 521/574 (90.77%), Postives = 544/574 (94.77%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKK GGSSSA+SSVVK E+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLP+A N   GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300

Query: 301 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VA+DK+RKDKITIYVEHPRPIEPP EPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPA
Sbjct: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420

Query: 421 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480

Query: 481 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 540
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540

Query: 541 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 574

[Close]

BLAST of Cucsat.G15098 vs. ExPASy TrEMBL
Match: A0A6J1CB57 (protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 995 bits (2572), Expect = 0.0
Identity = 521/574 (90.77%), Postives = 544/574 (94.77%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKK GGSSSA+SSVVK E+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 360 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 419

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLP+A N   GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 420 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 479

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 480 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 539

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 540 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 599

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 600 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 659

Query: 301 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VA+DK+RKDKITIYVEHPRPIEPP EPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 660 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 719

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPA
Sbjct: 720 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 779

Query: 421 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 780 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 839

Query: 481 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 540
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 840 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 899

Query: 541 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 900 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

The following BLAST results are available for this feature:

BLAST of Cucsat.G15098 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E7	3.8e-198	65.27	Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1	[more]
Q5ZJ85	1.2e-74	38.31	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=...	[more]
O43395	1.5e-72	37.55	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1...	[more]
Q5R5F1	1.5e-72	37.55	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2...	[more]
Q922U1	1.9e-72	37.75	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=...	[more]

BLAST of Cucsat.G15098 vs. NCBI nr


Match Name	Identity	Description
XP_031741295.1	99.65	protein RDM16 isoform X3 [Cucumis sativus]	[more]
XP_004143591.1	99.65	protein RDM16 isoform X1 [Cucumis sativus] >KGN50493.1 hypothetical protein Csa_...	[more]
XP_031741294.1	99.65	protein RDM16 isoform X2 [Cucumis sativus]	[more]
XP_008461606.1	96.68	PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo] >KAA0034019...	[more]
XP_038893249.1	94.76	protein RDM16 isoform X1 [Benincasa hispida]	[more]

BLAST of Cucsat.G15098 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KLQ4	99.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1	[more]
A0A5A7SXX5	96.68	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CF39	96.68	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC1035001...	[more]
A0A6J1CBS3	90.77	protein RDM16 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CB57	90.77	protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 685..707
None	No IPR available	COILS	Coil	Coil	coord: 340..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 671..707
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..399
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 687..707
None	No IPR available	PANTHER	PTHR14212:SF2	SUBFAMILY NOT NAMED	coord: 70..923
IPR010541	Domain of unknown function DUF1115	PFAM	PF06544	DUF1115	coord: 793..915 e-value: 1.9E-40 score: 138.4
IPR013881	Pre-mRNA-splicing factor 3	PFAM	PF08572	PRP3	coord: 540..768 e-value: 5.9E-62 score: 209.3
IPR027104	U4/U6 small nuclear ribonucleoprotein Prp3	PANTHER	PTHR14212	U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED	coord: 70..923

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15098.T2	Cucsat.G15098.T2	mRNA
Cucsat.G15098.T11	Cucsat.G15098.T11	mRNA
Cucsat.G15098.T1	Cucsat.G15098.T1	mRNA
Cucsat.G15098.T3	Cucsat.G15098.T3	mRNA
Cucsat.G15098.T6	Cucsat.G15098.T6	mRNA
Cucsat.G15098.T10	Cucsat.G15098.T10	mRNA
Cucsat.G15098.T5	Cucsat.G15098.T5	mRNA
Cucsat.G15098.T4	Cucsat.G15098.T4	mRNA
Cucsat.G15098.T7	Cucsat.G15098.T7	mRNA
Cucsat.G15098.T9	Cucsat.G15098.T9	mRNA
Cucsat.G15098.T8	Cucsat.G15098.T8	mRNA
Cucsat.G15098.T12	Cucsat.G15098.T12	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex