Cucsat.G15098.T11 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G15098.T11
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein RDM16 isoform X2
Location	ctg197: 532572 .. 536661 (-)
RNA-Seq Expression	Cucsat.G15098.T11
Synteny	Cucsat.G15098.T11

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTGAGGAAGGTCTTCCATGATTATGATGCCTTTGGGTAGTGCTAGACTGCTAGTAATGAACTTAATGAACTGAAGTCATAATCATGCAGGGATCTATGGTGGAACCTACCGATATGCCATCAGCAAGTGTGCCCCAGAATTTGTTACATCCTAGTCATTCCCTTCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAGGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGACATCCTCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCGGAGAAGTTGAAGAGAATTCCCCTGGTAAGTTAGGCAACAGAGATACTTTGATCCATGCTAGCTAGTTTCCCGCACTTTGATGTTGGTTTTACATATACATGGATGCATATGCGCATGTGTGTATTCGGTTTTTCTTCTGTGTATCAAGTGTTACTATTTGATCTTATAGATGAAGAAGGTTGGGGGTTCAAGTTCTGCTAATAGCTCAGTTGTGAAATCGGAGGAGAAAGCTAAACCTCCCAGTGGTATATTGGGTCCACTGTCAACTACCAATGATGCTACAACTCTTTCAACTGGGGTAGTGTCTAGTTCGTCGACATTACCTTCTGCTGCCAATGCTCTTGATGGTGGTATTAATGTTCCGGCTGGCCTTACCTCTATACCCCATATTGAAGCTGTTAAGCGTGCTCAGGAGCTCGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTTATAAATTTGTTTCCAGGGAATGTAGCAACTGACGTTGCTGTTCCACAGAAACCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGTAGGGAAATTGACGAACAAGGAAATGTAGTCAATATAACCAAACCCAGCAACCTTAGCACTCTTAAGGTTTGGAATGAACTTACATCTCTTTCGGAGGTTTTTTTCTTCTTTTATTAGCATTGAATTTTGAATAGATTGACCTTGTATACATTTCTAACTTCGCAGGTTAACATCAACAAACAAAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGATGTGGATCCAGATTCAAACCCTCATTTTGATGAGAGAATGGGTATAAATAAAACTAAACTGCTGAGGCCAAAGAGAATGAGTTTCCAGTTCGTTGAGGAAGGGAAATGGTCGAAGGAGGCTGAAACCTTAAAATTGAGGGTACTTATAGTTTCTTTCATAGTTGTCTTTGGTGAAAGAATGCTTGCATACTTATTTGTTAAATAAAATTCTTATATTTCTGCTATAGAGTAAATTTGGAGAGGCACAAGCGAAAGAACGAAGAGAAAAGCAGGCACAGTTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCAAATTTGATCGAGGTTTCAGAGAGAGTGGTGAAGGAAAAAACAAAAGACCCAATTCCTGAAATTGAGTGGTGGTAAGCTGATATTTTCTATTATGGTATTTCTTGAACTGTCTTATTTTACTTTTTATGTAAAAATTTGTAAGCTAAGAGTTGAGCAGACTGTATCTTTTCCCGTTCTCCTCTTGCAGTTATTTTAATTTTCTAGCATTTTGTTAATGTCTAGCTTTTAATGGGATGGCTTTGGATATTCAATTCTAATATATAATTTTTAAAAAAAATATCTAGGGATGTCCCGCTTTTGCAATCCGGTGCGTACAAGGATTTGGGAGATGGTTTTGTGGCCGATGACAAATTGAGAAAGGACAAGATTACCATATACGTGGAGCATCCTCGTCCTATTGAACCTCCTGCCGAGCCAGCTCTCCCCCCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGTACACAGCGTCGTCTAGCAAAGGAGAAAGATAGACAGGAAATGATTAGACAAGGCCTGATAGAACCACCTAAACCGAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTTGAGAAAGAGATTTGTGCTGCAGCTGCTGAGAGGGAGCAAGCTCACATAGATCGAAATATTGCACGAAAACTCACCCCTGCAGAGCGCCGTGAGAAGAAAGAACGTAAACTATTTGACGATTCAAATTCACTCGAGACATTTGTGTCTGTTTACAAGATCAACGATCTATCACACCCCCAGGCCCGGTTTAAAGTTGACGTTAATGCTAGAGAGAACCGATTGACAGGGTGTGCTGTGATATGCGATGGCATCAGTGTTCTGGTCGTTGAAGGGGGTAGCAAGTCCATCAAGAGGTACGCAAAACTTATGCTCAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGAGGAAAATGACGATAAACCCCTTAACAAATGTTCCTTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAATAGATTTTCCATCCAGGAGTGCATGACTGAGGCAGCTGCTAGGAAGATTTTCGCTGATGCCGGTGTCGGTCATTACTGGGATTTTGCTATTAACTTCTCCGACGATCAATTATAATTCAACTTCTGCACTGTTAGTTGATGCGAATTGCTGATGATTTACTTCAGGTCAAGAAGCAAGAAATGCAGAAATGTTAAAAGCCTATATATCATCACGGTATTGCCGGTCTTACTTGTTTCTATTAATTGGTTAGGTGGGAAGATTTCATTATGTTCCAGCTCACTTTTTCCACAAGTTCCTGGGAATTTTTCGGATTTCATGAGTTGCAACCAACATCATCTGTATGGGAAATATGTTTGTAGTAGTTGGTGATCAGTTGGTATCGCCCAAGACCACCATCTTCAAGAAACGGGTATTGTGTCCAATATTCGTCTTATAGTCTTCATTTCCTTGTAGTTTTATAGAATCTAGAGTTGTGTTTCTTTCTCTTTTCTCCACCCTTCATAAGTGAGGAATGTTTGACAAATCCACTCGGTTGGGTAGTTAAATGAAGGAAGGTGGCTTTAAATAACTTTCTACTCAAACAAAGAGGTACCCTTTTTACTAATTAATTTCCGCACGGTTATTGTGAAAACTCTATACTGGTTCTTCCTTGTTTTATCTTCTTGTTTCTTCTCAATTGTAGGTTCATAGGAGATTTGAACCCATGGCGAAAAAGCTCTGACCAATTGAATTTCATCGGTTGAGTTTGTGATTAAGGGTGAGTGAGTTTGATAATATCCATTCCCACAAATGTCTTTTCATTTTAGTAAAATTTTACACCATTTCCTGGATTTTCAAATGATTATAGTAATAAACACATTCTAGTTGAAGGTGTTTTGTAGTATATCTTTTTCGAGGTTTGGTTCTATAATGCTTTTGAAGTTGTGTGTCGAATCAATACAACTTTTAAAATGCTCCCTCTCTATCCTTCTTTTTGCTTTTATACATTGAAATTTTCTGGGCTCATTTTTTAATTATACTGCCGGTAACTATTTGGGTTCCCATTTGGTAACTGTCTTTGATCTTTTGCTTTCTTCCAACTTCTTACTACTTGTTTCTATATTTTCTATTTTAACATTTTAGTTCTTTAACCAATTTTCAAAAACAAAATCATATTTTTTATAACAGTTACTTTTGGTTTTCAAAATTTGGCTTTGGGAACAATAAAACATAAAAATCAGTAGTTTAAAGTGGTGTTTATAGGATTGATTTTCAAGAAGAAAAAAAAACAAAATCATATCAGATCAATTCTTTTCTTTCCATTTCTTATAATGATTCAAGTATTAATCAAATTTAAAATAAAAACAGAGTGAGGGGAGGCTTATTAAGTATAGAAAAATGGGTTCAATTACTTTTAGGTTTAGCAAAAACTTCCTACATTTTTTACCTTTCACGTTGATAGAAGATAGAATCTGTCTGTAGTAGAAATTCATAAAAGTGTATCATTGATAGGTGAAGCTTATAGTAGCTTCTTATTGGTACTATCATTAACATGAATTTAGTGTCATTTAGTGATAGAAACTTGTAGCAATCTATTAATACTATCAGTAACATTAATTGATAAAC

Coding sequence (CDS)

ATGCAGAAAGAATTGGCGGAGAAGTTGAAGAGAATTCCCCTGATGAAGAAGGTTGGGGGTTCAAGTTCTGCTAATAGCTCAGTTGTGAAATCGGAGGAGAAAGCTAAACCTCCCAGTGGTATATTGGGTCCACTGTCAACTACCAATGATGCTACAACTCTTTCAACTGGGGTAGTGTCTAGTTCGTCGACATTACCTTCTGCTGCCAATGCTCTTGATGGTGGTATTAATGTTCCGGCTGGCCTTACCTCTATACCCCATATTGAAGCTGTTAAGCGTGCTCAGGAGCTCGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTTATAAATTTGTTTCCAGGGAATGTAGCAACTGACGTTGCTGTTCCACAGAAACCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGTAGGGAAATTGACGAACAAGGAAATGTAGTCAATATAACCAAACCCAGCAACCTTAGCACTCTTAAGGTTAACATCAACAAACAAAAAAAGGATGCATTTCAGATTCTTAAACCTGAACTTGATGTGGATCCAGATTCAAACCCTCATTTTGATGAGAGAATGGGTATAAATAAAACTAAACTGCTGAGGCCAAAGAGAATGAGTTTCCAGTTCGTTGAGGAAGGGAAATGGTCGAAGGAGGCTGAAACCTTAAAATTGAGGAGTAAATTTGGAGAGGCACAAGCGAAAGAACGAAGAGAAAAGCAGGCACAGTTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCAAATTTGATCGAGGTTTCAGAGAGAGTGGTGAAGGAAAAAACAAAAGACCCAATTCCTGAAATTGAGTGGTGGGATGTCCCGCTTTTGCAATCCGGTGCGTACAAGGATTTGGGAGATGGTTTTGTGGCCGATGACAAATTGAGAAAGGACAAGATTACCATATACGTGGAGCATCCTCGTCCTATTGAACCTCCTGCCGAGCCAGCTCTCCCCCCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAGAAACTCCGTACACAGCGTCGTCTAGCAAAGGAGAAAGATAGACAGGAAATGATTAGACAAGGCCTGATAGAACCACCTAAACCGAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTTGAGAAAGAGATTTGTGCTGCAGCTGCTGAGAGGGAGCAAGCTCACATAGATCGAAATATTGCACGAAAACTCACCCCTGCAGAGCGCCGTGAGAAGAAAGAACGTAAACTATTTGACGATTCAAATTCACTCGAGACATTTGTGTCTGTTTACAAGATCAACGATCTATCACACCCCCAGGCCCGGTTTAAAGTTGACGTTAATGCTAGAGAGAACCGATTGACAGGGTGTGCTGTGATATGCGATGGCATCAGTGTTCTGGTCGTTGAAGGGGGTAGCAAGTCCATCAAGAGGTACGCAAAACTTATGCTCAGGCGTATAAATTGGGCTGCTTCTGTGAAAGAGGAGGAAGAGGAGGAAAATGACGATAAACCCCTTAACAAATGTTCCTTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCAATAGATTTTCCATCCAGGAGTGCATGACTGAGGCAGCTGCTAGGAAGATTTTCGCTGATGCCGGTGTCGGTCATTACTGGGATTTTGCTATTAACTTCTCCGACGATCAATTATAA

Protein sequence

MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARKIFADAGVGHYWDFAINFSDDQL

Homology

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BLAST of Cucsat.G15098.T11 vs. ExPASy Swiss-Prot
Match: Q9C7E7 (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 3.8e-198
Identity = 374/573 (65.27%), Postives = 449/573 (78.36%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           +QK LA++LK +PL+KK            K   +  P + +  P STT  A  +STG  S
Sbjct: 240 LQKGLADRLKNLPLLKK----------ATKPTSEGSPHTRV--PPSTTTPA--VSTG-TS 299

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
            +STLP             AG  SI +IEAVKRAQELAA MGF QD EFAP+INLFPG  
Sbjct: 300 FASTLPHTG---------LAGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQA 359

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
            +D+ V Q+P K PVLR+DALGREIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP
Sbjct: 360 PSDMTVAQRPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKP 419

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           +L+ D   NP+FD RMGI++ K+LRPKRMSFQFVEEGKW+++AE LK +S FGEA+AKE 
Sbjct: 420 QLEADLKENPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKEL 479

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVV-KEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 300
           + KQAQLAKA    DINPNLIEVSERV  KEK K+PIP++EWWD  +L +G Y ++ DG 
Sbjct: 480 KVKQAQLAKAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGEITDGT 539

Query: 301 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           + +  L+ +K+T Y+EHPRPIEPPAE A PPPQPLKLTKKEQKKLRTQRRLAKEK++QEM
Sbjct: 540 ITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEKEKQEM 599

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 420
           IRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEI  AAAEREQAH DRN ARKLTPA
Sbjct: 600 IRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAARKLTPA 659

Query: 421 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           E+REKKERKLFDD  ++ET VSVYKI  LSHP+ RFKV++NARENRLTGC+V+ D +SV+
Sbjct: 660 EKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKVEMNARENRLTGCSVMTDEMSVV 719

Query: 481 VVEGGSKSIKRYAKLMLRRINWAASVKEE--EEEENDDKPLNKCSLVWQGSVAKSSFNRF 540
           VVEG SK+IKRY KLM++RINW  + ++E  E+EE +    NKC LVWQGS+ K SF+RF
Sbjct: 720 VVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKPSFHRF 779

Query: 541 SIQECMTEAAARKIFADAGVGHYWDFAINFSDD 571
            + EC+TE+ A+K+F DAGV HYWD A+N+SDD
Sbjct: 780 HVHECVTESTAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of Cucsat.G15098.T11 vs. ExPASy Swiss-Prot
Match: Q5ZJ85 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-74
Identity = 190/496 (38.31%), Postives = 282/496 (56.85%), Query Frame = 0


Query: 88  IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 147
           IE  ++A EL AR+        G   +     L NL    +A      +  TK   L LD
Sbjct: 200 IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILD 259

Query: 148 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHFDERMGI 207
             GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN +FD R+ I
Sbjct: 260 EQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTYFDLRVSI 319

Query: 208 NKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 267
             T   R KR +F+F E+GK+ K A+ L+ +++         ++ QA++++A     I+ 
Sbjct: 320 --TPAQRQKR-TFKFHEKGKFEKIAQRLRTKAQL--------KKLQAEISQAARKTGIHT 379

Query: 268 NLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDKITIYVEHPR 327
           +         KE  +  IPEIEWWD  ++ +G   DL  G  +  K     IT  VEHP 
Sbjct: 380 STKLALITPKKELKEGEIPEIEWWDSYIIPNGL--DLKGG-TSSKKDEYFGITNLVEHPA 439

Query: 328 PIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 387
            + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM
Sbjct: 440 QLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLM 499

Query: 388 KVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSLET 447
           +VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL +D  S   
Sbjct: 500 RVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKIKKLKEDV-SQGV 559

Query: 448 FVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLMLRR 507
            ++VY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML R
Sbjct: 560 HIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHR 619

Query: 508 INW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARKIF 567
           I W    ++ K E+++E+D+   K  NKCSLVW+G+    SF     ++C TE  AR+ F
Sbjct: 620 IKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHF 678

Query: 568 ADAGVGHYWDFAINFS 569
              G  HYWD A++ S
Sbjct: 680 KKHGAEHYWDLALSES 678

[Close]

BLAST of Cucsat.G15098.T11 vs. ExPASy Swiss-Prot
Match: O43395 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-72
Identity = 187/498 (37.55%), Postives = 282/498 (56.63%), Query Frame = 0


Query: 88  IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 147
           IE  ++A EL AR+        G   +     L NL    +A      +  TK   L LD
Sbjct: 200 IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILD 259

Query: 148 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHFDERMGI 207
             GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN  FD R+ I
Sbjct: 260 EQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSI 319

Query: 208 NKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 267
             +   + +R +F+F ++GK+ K A+ L+ +++  + QA      +   A  K     + 
Sbjct: 320 APS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTST 379

Query: 268 NLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKD--KITIYVEH 327
            L  ++ +  KE  +  IPEIEWWD  ++ +G   DL +    ++  R+D   IT  VEH
Sbjct: 380 RLALIAPK--KELKEGDIPEIEWWDSYIIPNGF--DLTE----ENPKREDYFGITNLVEH 439

Query: 328 PRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 387
           P  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SN
Sbjct: 440 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN 499

Query: 388 LMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSL 447
           LM+VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 500 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 559

Query: 448 ETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLML 507
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 560 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 619

Query: 508 RRINW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARK 567
            RI W    ++ K +++EE+D+   K  NKC LVW+G+    SF     ++C TE  AR+
Sbjct: 620 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 568 IFADAGVGHYWDFAINFS 569
            F   G  HYWD A++ S
Sbjct: 680 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of Cucsat.G15098.T11 vs. ExPASy Swiss-Prot
Match: Q5R5F1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-72
Identity = 187/498 (37.55%), Postives = 282/498 (56.63%), Query Frame = 0


Query: 88  IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 147
           IE  ++A EL AR+        G   +     L NL    +A      +  TK   L LD
Sbjct: 200 IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILD 259

Query: 148 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHFDERMGI 207
             GR +D  G  + +T    + TLK NI   K++ F Q LK +   D +SN  FD R+ I
Sbjct: 260 EQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFRQQLKEKPSEDMESNTFFDPRVSI 319

Query: 208 NKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 267
             +   + +R +F+F ++GK+ K A+ L+ +++  + QA      +   A  K     + 
Sbjct: 320 APS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTST 379

Query: 268 NLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKD--KITIYVEH 327
            L  ++ +  KE  +  IPEIEWWD  ++ +G   DL +    ++  R+D   IT  VEH
Sbjct: 380 RLALIAPK--KELKEGDIPEIEWWDSYIIPNGF--DLTE----ENPKREDYFGITNLVEH 439

Query: 328 PRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 387
           P  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SN
Sbjct: 440 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN 499

Query: 388 LMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSL 447
           LM+VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 500 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 559

Query: 448 ETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLML 507
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 560 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 619

Query: 508 RRINW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARK 567
            RI W    ++ K +++EE+D+   K  NKC LVW+G+    SF     ++C TE  AR+
Sbjct: 620 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 568 IFADAGVGHYWDFAINFS 569
            F   G  HYWD A++ S
Sbjct: 680 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of Cucsat.G15098.T11 vs. ExPASy Swiss-Prot
Match: Q922U1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-72
Identity = 188/498 (37.75%), Postives = 281/498 (56.43%), Query Frame = 0


Query: 88  IEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVPQKPTKAPVLRLD 147
           IE  ++A EL AR+        G   +     L NL    +A      +  TK   L LD
Sbjct: 200 IEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILD 259

Query: 148 ALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF-QILKPELDVDPDSNPHFDERMGI 207
             GR +D  G  V +T    + TLK NI   K++ F Q LK +   D +SN  FD R+ I
Sbjct: 260 EQGRTVDATGKEVELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSI 319

Query: 208 NKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 267
             +   + +R +F+F ++GK+ K A+ L+ +++  + QA      +   A  K     + 
Sbjct: 320 APS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQAARKTGIHTST 379

Query: 268 NLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKD--KITIYVEH 327
            L  ++ +  KE  +  IPEIEWWD  ++ +G   DL +    ++  R+D   IT  VEH
Sbjct: 380 RLALIAPK--KELKEGDIPEIEWWDSYIIPNGF--DLTE----ENPKREDYFGITNLVEH 439

Query: 328 PRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSN 387
           P  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL  PP+PKV++SN
Sbjct: 440 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLTPPPEPKVRISN 499

Query: 388 LMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSNSL 447
           LM+VLG+EA QDPTK+E  + A  A+R++AH + N ARKLT  +R+ KK +KL +D  S 
Sbjct: 500 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQ 559

Query: 448 ETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYAKLML 507
              +SVY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML
Sbjct: 560 GVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML 619

Query: 508 RRINW---AASVKEEEEEENDD---KPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAARK 567
            RI W    ++ K +++EE+D+   K  NKC LVW+G+    SF     ++C TE  AR+
Sbjct: 620 HRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMARE 677

Query: 568 IFADAGVGHYWDFAINFS 569
            F   G  HYWD A++ S
Sbjct: 680 HFKKHGAEHYWDLALSES 677

[Close]

BLAST of Cucsat.G15098.T11 vs. NCBI nr
Match: XP_031741295.1 (protein RDM16 isoform X3 [Cucumis sativus])

HSP 1 Score: 1087 bits (2810), Expect = 0.0
Identity = 570/572 (99.65%), Postives = 570/572 (99.65%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLKRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVS
Sbjct: 64  MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 123

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV
Sbjct: 124 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 183

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 184 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 243

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 244 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 303

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV
Sbjct: 304 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 363

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 364 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 423

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 424 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 483

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 484 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 543

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 544 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 603

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFAINFSDDQL
Sbjct: 604 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 635

[Close]

BLAST of Cucsat.G15098.T11 vs. NCBI nr
Match: XP_004143591.1 (protein RDM16 isoform X1 [Cucumis sativus] >KGN50493.1 hypothetical protein Csa_000308 [Cucumis sativus])

HSP 1 Score: 1087 bits (2810), Expect = 0.0
Identity = 570/572 (99.65%), Postives = 570/572 (99.65%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLKRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV
Sbjct: 412 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV
Sbjct: 592 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFAINFSDDQL
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923

[Close]

BLAST of Cucsat.G15098.T11 vs. NCBI nr
Match: XP_031741294.1 (protein RDM16 isoform X2 [Cucumis sativus])

HSP 1 Score: 1087 bits (2810), Expect = 0.0
Identity = 570/572 (99.65%), Postives = 570/572 (99.65%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLKRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVS
Sbjct: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 60

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV
Sbjct: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV
Sbjct: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 420

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFAINFSDDQL
Sbjct: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572

[Close]

BLAST of Cucsat.G15098.T11 vs. NCBI nr
Match: XP_008461606.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo] >KAA0034019.1 U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo var. makuwa])

HSP 1 Score: 1059 bits (2739), Expect = 0.0
Identity = 553/572 (96.68%), Postives = 562/572 (98.25%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKKVGGSSSANSSVVK EEKAKPPSG+LG LSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSST PSAANALD GINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 412 SSSTFPSAANALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           +EKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLL S  Y+DLGDGFV
Sbjct: 592 KEKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           AD+KLRKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADEKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEE DDKP+NKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFA+NFSDDQ+
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of Cucsat.G15098.T11 vs. NCBI nr
Match: XP_038893249.1 (protein RDM16 isoform X1 [Benincasa hispida])

HSP 1 Score: 1048 bits (2710), Expect = 0.0
Identity = 542/572 (94.76%), Postives = 561/572 (98.08%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKKVGGSSSA+SSV+K EEK KPP+G+LG L TTNDAT+LSTGV S
Sbjct: 352 MQKELAEKLKKIPLMKKVGGSSSASSSVMKLEEKPKPPAGVLGQLPTTNDATSLSTGVAS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 412 SSSTLPSAANALDGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAET+KL+SKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLKSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           +EKQAQLAKAKAAPDINPNLIEVSERV+KEKTK+PIPEIEWWDVPLL SG Y+D+GDGFV
Sbjct: 592 KEKQAQLAKAKAAPDINPNLIEVSERVMKEKTKEPIPEIEWWDVPLLHSGTYEDVGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADDKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRY KLMLRRINWAASVKEEEEEENDD+P+NKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYGKLMLRRINWAASVKEEEEEENDDRPVNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFA+N+SDDQ+
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAVNYSDDQI 923

[Close]

BLAST of Cucsat.G15098.T11 vs. ExPASy TrEMBL
Match: A0A0A0KLQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1)

HSP 1 Score: 1087 bits (2810), Expect = 0.0
Identity = 570/572 (99.65%), Postives = 570/572 (99.65%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLKRIPLMKKVGGSSSANSSVVK EEKAKPPSGILGPLSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV
Sbjct: 412 SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV
Sbjct: 592 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFAINFSDDQL
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 923

[Close]

BLAST of Cucsat.G15098.T11 vs. ExPASy TrEMBL
Match: A0A5A7SXX5 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00020 PE=4 SV=1)

HSP 1 Score: 1059 bits (2739), Expect = 0.0
Identity = 553/572 (96.68%), Postives = 562/572 (98.25%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKKVGGSSSANSSVVK EEKAKPPSG+LG LSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSST PSAANALD GINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 412 SSSTFPSAANALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           +EKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLL S  Y+DLGDGFV
Sbjct: 592 KEKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           AD+KLRKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADEKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEE DDKP+NKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFA+NFSDDQ+
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of Cucsat.G15098.T11 vs. ExPASy TrEMBL
Match: A0A1S3CF39 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC103500170 PE=4 SV=1)

HSP 1 Score: 1059 bits (2739), Expect = 0.0
Identity = 553/572 (96.68%), Postives = 562/572 (98.25%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKKVGGSSSANSSVVK EEKAKPPSG+LG LSTTNDATTLSTGVVS
Sbjct: 352 MQKELAEKLKKIPLMKKVGGSSSANSSVVKLEEKAKPPSGVLGQLSTTNDATTLSTGVVS 411

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSST PSAANALD GINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 412 SSSTFPSAANALDVGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 471

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 472 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 531

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER
Sbjct: 532 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 591

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFV 300
           +EKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLL S  Y+DLGDGFV
Sbjct: 592 KEKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLHSSTYEDLGDGFV 651

Query: 301 ADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 360
           AD+KLRKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI
Sbjct: 652 ADEKLRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMI 711

Query: 361 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPAE 420
           RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPAE
Sbjct: 712 RQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAE 771

Query: 421 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 480
           RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV
Sbjct: 772 RREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLV 831

Query: 481 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQ 540
           VEGGSKSIKRYAKLMLRRINWAASVKEEEEEE DDKP+NKCSLVWQGSVAKSSFNRFSIQ
Sbjct: 832 VEGGSKSIKRYAKLMLRRINWAASVKEEEEEETDDKPVNKCSLVWQGSVAKSSFNRFSIQ 891

Query: 541 ECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           ECMTEAAARKIFADAGVGHYWDFA+NFSDDQ+
Sbjct: 892 ECMTEAAARKIFADAGVGHYWDFAVNFSDDQI 923

[Close]

BLAST of Cucsat.G15098.T11 vs. ExPASy TrEMBL
Match: A0A6J1CBS3 (protein RDM16 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 995 bits (2572), Expect = 0.0
Identity = 521/574 (90.77%), Postives = 544/574 (94.77%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKK GGSSSA+SSVVK E+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 1   MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 60

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLP+A N   GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 61  SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 120

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 121 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 181 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 240

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 241 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 300

Query: 301 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VA+DK+RKDKITIYVEHPRPIEPP EPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 301 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPA
Sbjct: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 420

Query: 421 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 421 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480

Query: 481 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 540
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 481 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 540

Query: 541 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 541 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 574

[Close]

BLAST of Cucsat.G15098.T11 vs. ExPASy TrEMBL
Match: A0A6J1CB57 (protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 995 bits (2572), Expect = 0.0
Identity = 521/574 (90.77%), Postives = 544/574 (94.77%), Query Frame = 0


Query: 1   MQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEKAKPPSGILGPLSTTNDATTLSTGVVS 60
           MQKELAEKLK+IPLMKK GGSSSA+SSVVK E+K+KP  G+LGP  TTN  TT+S GV S
Sbjct: 360 MQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVAS 419

Query: 61  SSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNV 120
           SSSTLP+A N   GGINVPAGLTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN+
Sbjct: 420 SSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNI 479

Query: 121 ATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 180
           ATDVAVPQKP KAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP
Sbjct: 480 ATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKP 539

Query: 181 ELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKER 240
           EL+VDP+SNPHFDERMGINKTKLLRPKRM+FQFVEEGKWSKEAET+KLRSKFGEAQAKER
Sbjct: 540 ELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKER 599

Query: 241 REKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 300
           REKQAQLAKAKAAPDINPNLIEVSERV VKEKTK+PIPEIEWWDV LL SG Y D+GDGF
Sbjct: 600 REKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDGF 659

Query: 301 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 360
           VA+DK+RKDKITIYVEHPRPIEPP EPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 660 VANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 719

Query: 361 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEICAAAAEREQAHIDRNIARKLTPA 420
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEI AAAAEREQAHIDRNIARKLTPA
Sbjct: 720 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 779

Query: 421 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 480
           ERREKKERKLFDD+NSLE FVSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGISVL
Sbjct: 780 ERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISVL 839

Query: 481 VVEGGSKSIKRYAKLMLRRINWAASVKEEEE-EENDDKPLNKCSLVWQGSVAKSSFNRFS 540
           VVEGGSKSIKRY KLMLRRINWAASVKEEEE +E+DDKP+NKCSLVWQGSVAKSSFN+F 
Sbjct: 840 VVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKFF 899

Query: 541 IQECMTEAAARKIFADAGVGHYWDFAINFSDDQL 572
           IQECMTEAAARKIFADAGVGHYWD A+NFSDDQ+
Sbjct: 900 IQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

The following BLAST results are available for this feature:

BLAST of Cucsat.G15098.T11 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E7	3.8e-198	65.27	Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1	[more]
Q5ZJ85	1.2e-74	38.31	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=...	[more]
O43395	1.5e-72	37.55	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1...	[more]
Q5R5F1	1.5e-72	37.55	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2...	[more]
Q922U1	1.9e-72	37.75	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Mus musculus OX=10090 GN=Prpf3 PE=...	[more]

BLAST of Cucsat.G15098.T11 vs. NCBI nr


Match Name	Identity	Description
XP_031741295.1	99.65	protein RDM16 isoform X3 [Cucumis sativus]	[more]
XP_004143591.1	99.65	protein RDM16 isoform X1 [Cucumis sativus] >KGN50493.1 hypothetical protein Csa_...	[more]
XP_031741294.1	99.65	protein RDM16 isoform X2 [Cucumis sativus]	[more]
XP_008461606.1	96.68	PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Cucumis melo] >KAA0034019...	[more]
XP_038893249.1	94.76	protein RDM16 isoform X1 [Benincasa hispida]	[more]

BLAST of Cucsat.G15098.T11 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KLQ4	99.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1	[more]
A0A5A7SXX5	96.68	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CF39	96.68	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC1035001...	[more]
A0A6J1CBS3	90.77	protein RDM16 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CB57	90.77	protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 334..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR14212:SF2	SUBFAMILY NOT NAMED	coord: 3..572
IPR010541	Domain of unknown function DUF1115	PFAM	PF06544	DUF1115	coord: 442..564 e-value: 8.9E-41 score: 139.4
IPR013881	Pre-mRNA-splicing factor 3	PFAM	PF08572	PRP3	coord: 189..417 e-value: 2.3E-62 score: 210.6
IPR027104	U4/U6 small nuclear ribonucleoprotein Prp3	PANTHER	PTHR14212	U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED	coord: 3..572

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G15098	Cucsat.G15098	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15098.T11.E1	Cucsat.G15098.T11.E1	exon
Cucsat.G15098.T11.E2	Cucsat.G15098.T11.E2	exon
Cucsat.G15098.T11.E3	Cucsat.G15098.T11.E3	exon
Cucsat.G15098.T11.E4	Cucsat.G15098.T11.E4	exon
Cucsat.G15098.T11.E5	Cucsat.G15098.T11.E5	exon
Cucsat.G15098.T11.E6	Cucsat.G15098.T11.E6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15098.T11.C5	Cucsat.G15098.T11.C5	CDS
Cucsat.G15098.T11.C4	Cucsat.G15098.T11.C4	CDS
Cucsat.G15098.T11.C3	Cucsat.G15098.T11.C3	CDS
Cucsat.G15098.T11.C2	Cucsat.G15098.T11.C2	CDS
Cucsat.G15098.T11.C1	Cucsat.G15098.T11.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15098.T11	Cucsat.G15098.T11-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex