Cucsat.G12327.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G12327.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Growth-regulating factor
Location	ctg1837: 127242 .. 129562 (+)
RNA-Seq Expression	Cucsat.G12327.T3
Synteny	Cucsat.G12327.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGGGAAGGGTGAAAAAATATAATATAATGTAATGTAAATAAATTGAAGGAAAAGAGAAAAAGGCAAAAGATGGGGGAAGTTAATGTTATAAAAAGGGAGAAGGGTTTTGGTTAGATCCTTCAGCCTCCTGAGTGTTCAATAGGAGGAAGACAGGTGCCAGTGTTAATTTGTTTGGCATTGATAAAGGAGTTTGTGTAGGTACATCACACCACATTGTTTCAGCAGTAGTTTTTTGCAAAATCTCATGGCACAGTTTTCAAGGAATTGTGATGTGGAGAGAGCAAAATCAAGGGTGTGTCTATGATATTTTGTTTCTTTTTCTCTTTCTTTTATCCATTTGTATGTGAATTTCTGTAAGGACGTCAGAGACAAAAGCAGCAATGAAAGCAGAGGCAGAACCCAACAGAAGAGTAGTCATATAACTTCAGACTGCAACTGAGAGAAAGAGAAAGAGAAAGAGAAAGAGAGAAGGTATCAGTAAGCCATCATTTGACAGAAACAAGCTTTCACAACCTATGGACTTTGCAGAAATACCCATAAAAAACTAGCATCCCCCCAAGAACAACATACCCTCCTCTCTGTCTTTCAAGCCTTTCGAACTTGGTCCTTTTTAAAGATTTTTCTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTATATATATTTTTCCTATTTTTTTGTTCTACTTTCAAGAATAATGAATTCAAGTCCAAAGACCTGCACCTCTCCATTCACAGCAACTCAATGGCAAGAACTTGAACACCAAGCTCTGATCTTCAAACACATGGTTTCAGGAGTACCAATCCCTCCTGATCTAATCTTCTCTGTCAAAAGAAGCTTGGATTCCTCCATTTCTGCAAGACTCTTCCCTCACCAACCCAGTAAGTCGCCATTACATGACTTTTCAAAACAGTTCCCTCTCTTTCCATTTTCTTATCTCTGTTTTCAGATGCAAGCAGATTACTAATCTGACTGTTTGATTGTGTTTTTCAACAGTTGGATGGGGTTGTTTTGAGATGGGTTTTGGTCGGAAAACAGACCCAGAGCCAGGAAGATGCAGAAGAACCGATGGAAAAAAATGGAGATGTTCAAAAGAAGCTTATCCAGACTCCAAATACTGTGAGAGGCACATGCATAGAGGCAGAAATCGTTCAAGAAAGCCTGTGGAAATCTCTTCAACACCACCAATTCAAACCCCAACTCCTTTAATCCTCACTTCAACCAGAACCCTCTCTTCTTCTTCTTCCACTCCAACCTCCTCTTCCTATCCTCTCTCTACACTTTCTTCTTCTTCTTCTTCACTGACTTCTGAAACTCAATCCTATCACCAACCACCTCCTCCTGCTTATCACGAATCCTCCATTCATCCATTTCTGTATTCTCAATCATCCTCCAGAACTCCATGCTCTGATTTCTCTTCGAACATCACAAACCCTCAACTCTTCTTGTACTCAGGGACTCATTCTCAATCTGATAAAGACTACAGGTCGGTGAAAATGAAAAGTTTTATAAACGTTTCCTTTTTCTATGATGGGTTGTTTTTCTCTTTTTCTTGGAGTTTGATGATTAATATTATAAGTAATGTTGATATAAAGTATTGATTAACATGACATGTAGTTAAACCTTATTGTGTCTTGTGTTAAGTAGGGATATTAGTGGTTCAAGAGAGGGTGTGGGAATGCAGGCGTTCTTTCCCTCAGTTGCTGATTCTGCTAGAAGCATTGCTGAGGTTTATAGTCAGCCAATAGGGATGGATTCTTACAAAGGATGCTCACAATATGTCTCTCAAAACCATCAAATTTACAGTTCTAAACAGGCAAGGCAACAGCAAGAACAACACTGCTTTGTTTTGGGTACAGACTTCAATAAATCATCAAGATCAGCTAAAACAGAGGAAGAAGATGAAGATGCAGAAACCCAGAAGCCTCTACTCCACTTCTTTGAGGATTGCCCACCTAAAAGCTCAGATTCCTGGCTTGATTTAGCCTCAAATTCAAGTATACAAAGTGGAAATTTTATTGGGTTATGAATACTATTCCTGCTCTGCTTACTTCTTGAGCTGTAATCTGACACTTCTCACTTCACCTCTCTTTTTTCTCTCTCTGTTTCTGTGCAGATGGTTAAAGTTTCAATAATGGAGTTTTGGGTTATGGCCAAAAGAGTACTTGTCAGTGAGTGAAGTGTCCTCTTTTTTTTTCCTTCTTAGTTTGCGGTCAGGGAAGCTTTTCTTTTGCTAAAGTTTTGAATGTAAAACTGCAGGATTCTCAAGAGAGGTTTTCTGTCCTTTGCTTTCTTTTGATATTTTCCTTTTT

Coding sequence (CDS)

ATGAATTCAAGTCCAAAGACCTGCACCTCTCCATTCACAGCAACTCAATGGCAAGAACTTGAACACCAAGCTCTGATCTTCAAACACATGGTTTCAGGAGTACCAATCCCTCCTGATCTAATCTTCTCTGTCAAAAGAAGCTTGGATTCCTCCATTTCTGCAAGACTCTTCCCTCACCAACCCATTGGATGGGGTTGTTTTGAGATGGGTTTTGGTCGGAAAACAGACCCAGAGCCAGGAAGATGCAGAAGAACCGATGGAAAAAAATGGAGATGTTCAAAAGAAGCTTATCCAGACTCCAAATACTGTGAGAGGCACATGCATAGAGGCAGAAATCGTTCAAGAAAGCCTGTGGAAATCTCTTCAACACCACCAATTCAAACCCCAACTCCTTTAATCCTCACTTCAACCAGAACCCTCTCTTCTTCTTCTTCCACTCCAACCTCCTCTTCCTATCCTCTCTCTACACTTTCTTCTTCTTCTTCTTCACTGACTTCTGAAACTCAATCCTATCACCAACCACCTCCTCCTGCTTATCACGAATCCTCCATTCATCCATTTCTGTATTCTCAATCATCCTCCAGAACTCCATGCTCTGATTTCTCTTCGAACATCACAAACCCTCAACTCTTCTTGTACTCAGGGACTCATTCTCAATCTGATAAAGACTACAGGGATATTAGTGGTTCAAGAGAGGGTGTGGGAATGCAGGCGTTCTTTCCCTCAGTTGCTGATTCTGCTAGAAGCATTGCTGAGGTTTATAGTCAGCCAATAGGGATGGATTCTTACAAAGGATGCTCACAATATGTCTCTCAAAACCATCAAATTTACAGTTCTAAACAGGCAAGGCAACAGCAAGAACAACACTGCTTTGTTTTGGGTACAGACTTCAATAAATCATCAAGATCAGCTAAAACAGAGGAAGAAGATGAAGATGCAGAAACCCAGAAGCCTCTACTCCACTTCTTTGAGGATTGCCCACCTAAAAGCTCAGATTCCTGGCTTGATTTAGCCTCAAATTCAAATGGTTAA

Protein sequence

MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQPIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYHESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFFPSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKSSRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSNG

Homology

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy Swiss-Prot
Match: Q8L8A6 (Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 5.7e-64
Identity = 166/377 (44.03%), Postives = 222/377 (58.89%), Query Frame = 0


Query: 11  PFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQPIGWGCFEMG 70
           PFT TQW+ELEHQALI+K+MVSGVP+PP+LIFS++RSLD+S+ +RL PHQ +GWGC++MG
Sbjct: 16  PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRSLDTSLVSRLLPHQSLGWGCYQMG 75

Query: 71  FGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE--ISSTPPIQT 130
           FGRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRGRNR+RK ++   ++T P+ +
Sbjct: 76  FGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLDQNQTTTTPLTS 135

Query: 131 PTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSL--------------TSETQSYHQP 190
           P+ L  T+    S + S+ +SS+   +T S+SSSS+              +S T+ Y   
Sbjct: 136 PS-LSFTNNNNPSPTLSSSSSSNSSSTTYSASSSSMDAYSNSNRFGLGGSSSNTRGYFNS 195

Query: 191 PPPAYHESSIHPFLYSQSSSRTPCSDFSSNITNPQLF--LYSGTHSQSDKDYRDISGSRE 250
               Y   S  P    Q+           N  +   F  L S T  +  + ++ I     
Sbjct: 196 HSLDYPYPSTSPKQQQQTLHHASALSLHQNTNSTSQFNVLASATDHKDFRYFQGIGERVG 255

Query: 251 GVGMQAFFPSVADSAR-SIAEVYSQPIGM---DSYKGCSQYVSQ--NHQIYSSKQARQ-- 310
           GVG + FFP  + S + S    + QP+     D Y  CS   ++  +H  YSS  + Q  
Sbjct: 256 GVGERTFFPEASRSFQDSPYHHHQQPLATVMNDPYHHCSTDHNKIDHHHTYSSSSSSQHL 315

Query: 311 -----QQEQHCFVLGTD-FNK--------SSRSAKTEEEDE---DAETQKPLLHFF-EDC 342
                 ++Q CFVLG D FNK        SSR  + +EEDE      ++K L HFF ED 
Sbjct: 316 HHDHDHRQQQCFVLGADMFNKPTRSVLANSSRQDQNQEEDEKDSSESSKKSLHHFFGEDW 375

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy Swiss-Prot
Match: A2XA73 (Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.0e-53
Identity = 149/371 (40.16%), Postives = 204/371 (54.99%), Query Frame = 0


Query: 11  PFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRS--LDSSIS---ARLFPHQP-IGW 70
           PFTA+QWQELEHQALI+K+M SG PIP DLI  ++RS  LDS+++   +  FP QP +GW
Sbjct: 18  PFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQPSLGW 77

Query: 71  GCFEMGFGRKT-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISST 130
           GCF MGFGRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRG+NRSRKPVE+S  
Sbjct: 78  GCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMS-- 137

Query: 131 PPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYHESS 190
             + TP P           SSS  +++S   + ++ ++++ +S   SY +P P   H+++
Sbjct: 138 --LATPPP----------PSSSATSAASNSSAGVAPTTTTTSSPAPSYSRPAP---HDAA 197

Query: 191 IHPFL----YSQSSSRTPC--------SDFSSNITNPQLFLYSGTHSQSDKDYRDISGSR 250
            +  L    Y+ +++RTP         S F  +I           +S   K+Y     ++
Sbjct: 198 PYQALYGGPYAAATARTPAAAAYHAQVSPFHLHIDTTHPHPPPSYYSMDHKEYAYGHATK 257

Query: 251 EGVGMQAFFPSVAD-----SARSIAEVYSQPIGMD--------------SYKGCSQYV-- 310
           E  G  AFF    +     +A    +   + +GM+               +   S Y   
Sbjct: 258 EVHGEHAFFSDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAID 317

Query: 311 --SQNHQIYSSKQARQQQEQHCFVLGTDFNKSSRSAKTEEEDEDAETQKPLLHFFEDCP- 338
              ++      +Q +QQQ+QHCF+LG D     R  K    D  A  QKPL HFF++ P 
Sbjct: 318 LSKEDDDEKERRQQQQQQQQHCFLLGADL----RLEKPAGHDHAAAAQKPLRHFFDEWPH 367

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy Swiss-Prot
Match: Q6AWY8 (Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.6e-53
Identity = 151/372 (40.59%), Postives = 205/372 (55.11%), Query Frame = 0


Query: 11  PFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRS--LDSSIS---ARLFPHQP-IGW 70
           PFTA+QWQELEHQALI+K+M SG PIP DLI  ++RS  LDS+++   +  FP QP +GW
Sbjct: 18  PFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQPSLGW 77

Query: 71  GCFEMGFGRKT-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISST 130
           GCF MGFGRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRG+NRSRKPVE+S  
Sbjct: 78  GCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMS-- 137

Query: 131 PPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYHESS 190
             + TP P           SSS  +++S   + ++ ++++ +S   SY +P P   H+++
Sbjct: 138 --LATPPP----------PSSSATSAASNTSAGVAPTTTTTSSPAPSYSRPAP---HDAA 197

Query: 191 IHPFL----YSQSSSRTPCSDFSSNITNPQLFLYSGTH--------SQSDKDYRDISGSR 250
            +  L    Y+ +++RTP +       +P       TH        S   K+Y     ++
Sbjct: 198 PYQALYGGPYAAATARTPAAAAYHAQVSPFHLQLDTTHPHPPPSYYSMDHKEYAYGHATK 257

Query: 251 EGVGMQAFFPSVAD-----SARSIAEVYSQPIGMDSYK---------GCSQYVSQNHQIY 310
           E  G  AFF    +     +A    +   + +GM+  +         G     +  + I 
Sbjct: 258 EVHGEHAFFSDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAID 317

Query: 311 SSK----------QARQQQEQHCFVLGTDFNKSSRSAKTEEEDEDAETQKPLLHFFEDCP 338
            SK          Q +QQQ+QHCF+LG D     R  K    D  A  QKPL HFF++ P
Sbjct: 318 LSKEDDDEKERRQQQQQQQQQHCFLLGADL----RLEKPAGHDHAAAAQKPLRHFFDEWP 368

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy Swiss-Prot
Match: Q6AWY6 (Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 9.1e-38
Identity = 81/143 (56.64%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 11  PFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQPIGWGCFEMG 70
           PFTA Q++ELE QALI+K++V+GVP+P DL+  ++R LD S+++R + H  +G+G +   
Sbjct: 53  PFTAAQYEELEQQALIYKYLVAGVPVPADLLLPIRRGLD-SLASRFYHHPVLGYGSY--- 112

Query: 71  FGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSTPPIQTPT 130
           FG+K DPEPGRCRRTDGKKWRCSKEA PDSKYCERHMHRGRNRSRKPVE     P   P 
Sbjct: 113 FGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVAPHSQPP 172

Query: 131 PLILTSTRTLSSSSSTPTSSSYP 154
               T+     +S++    S YP
Sbjct: 173 ---ATAPAAAVTSTAFQNHSLYP 188

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy Swiss-Prot
Match: Q6ZIK5 (Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.1e-38
Identity = 122/335 (36.42%), Postives = 171/335 (51.04%), Query Frame = 0


Query: 11  PFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQPIGWGCFEMG 70
           PFTA Q++ELE QALI+K++V+GVP+PPDL+  ++R LD S++AR + H  +G+G +   
Sbjct: 64  PFTAAQYEELEQQALIYKYLVAGVPVPPDLVLPIRRGLD-SLAARFYNHPALGYGPY--- 123

Query: 71  FGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEISSTPPIQTPT 130
           FG+K DPEPGRCRRTDGKKWRCSKEA PDSKYCERHMHRGRNRSRKPVE       Q P+
Sbjct: 124 FGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVETQLVAQSQPPS 183

Query: 131 PLILTSTRTL---SSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYHESSIHPF 190
            ++ ++   L   S+ SS    S YP    S+      +   S+        H  +  P+
Sbjct: 184 SVVGSAAAPLAAASNGSSFQNHSLYPAIAGSNGGGGGRNMPSSFGSALGSQLHMDNAAPY 243

Query: 191 LYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFFPSVADSA 250
                      +           +   GT S +D+  + I+        +A   S+ +  
Sbjct: 244 -----------AAVGGGTGKDLRYTAYGTRSLADEQSQLIT--------EAINTSIENPW 303

Query: 251 RSIAEVYSQ-PIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKSSRSAKT 310
           R +    S  P+   S  G    + QN     SK  RQ         G D+      A  
Sbjct: 304 RLLPSQNSPFPLSSYSQLGALSDLGQNTPSSLSKVQRQPLS----FFGNDY------AAV 361

Query: 311 EEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNS 342
           +   ++ +T +P   FF++  PK  DSW DLA  +
Sbjct: 364 DSVKQENQTLRP---FFDEW-PKGRDSWSDLADEN 361

[Close]

BLAST of Cucsat.G12327.T3 vs. NCBI nr
Match: XP_011651737.1 (growth-regulating factor 5 isoform X2 [Cucumis sativus] >XP_031738669.1 growth-regulating factor 5 isoform X2 [Cucumis sativus] >KAE8650906.1 hypothetical protein Csa_001606 [Cucumis sativus])

HSP 1 Score: 684 bits (1764), Expect = 5.12e-248
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180
           SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH
Sbjct: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180

Query: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240
           ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF
Sbjct: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240

Query: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300
           PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS
Sbjct: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300

Query: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSNG 343
           SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSNG
Sbjct: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSNG 343

[Close]

BLAST of Cucsat.G12327.T3 vs. NCBI nr
Match: XP_004148588.1 (growth-regulating factor 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 679 bits (1753), Expect = 3.28e-246
Identity = 341/342 (99.71%), Postives = 342/342 (100.00%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180
           SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH
Sbjct: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180

Query: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240
           ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF
Sbjct: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240

Query: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300
           PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS
Sbjct: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300

Query: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSN 342
           SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNS+
Sbjct: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSS 342

[Close]

BLAST of Cucsat.G12327.T3 vs. NCBI nr
Match: XP_008463996.1 (PREDICTED: growth-regulating factor 5 isoform X2 [Cucumis melo] >KAA0058523.1 growth-regulating factor 5-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 667 bits (1722), Expect = 1.25e-241
Identity = 336/343 (97.96%), Postives = 338/343 (98.54%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180
           SSTPP QTPTPLILTSTRTLSSSS TPTSSSYPLSTLSSSSS LTSETQSYHQPPPPAYH
Sbjct: 121 SSTPPTQTPTPLILTSTRTLSSSSPTPTSSSYPLSTLSSSSS-LTSETQSYHQPPPPAYH 180

Query: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240
           ESSIHPFLYSQSSSRTPCSDFSSN TNPQLFLYSGTHSQ+DKDYRDISG REGVGMQAFF
Sbjct: 181 ESSIHPFLYSQSSSRTPCSDFSSNNTNPQLFLYSGTHSQADKDYRDISGPREGVGMQAFF 240

Query: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300
           PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS
Sbjct: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300

Query: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSNG 343
           SRSAKTEEEDEDAETQKPLLHFFEDCPPK+SDSWLDLASNSNG
Sbjct: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKTSDSWLDLASNSNG 342

[Close]

BLAST of Cucsat.G12327.T3 vs. NCBI nr
Match: XP_008463995.1 (PREDICTED: growth-regulating factor 5 isoform X1 [Cucumis melo] >TYK07223.1 growth-regulating factor 5 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 663 bits (1711), Expect = 7.98e-240
Identity = 334/342 (97.66%), Postives = 337/342 (98.54%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180
           SSTPP QTPTPLILTSTRTLSSSS TPTSSSYPLSTLSSSSS LTSETQSYHQPPPPAYH
Sbjct: 121 SSTPPTQTPTPLILTSTRTLSSSSPTPTSSSYPLSTLSSSSS-LTSETQSYHQPPPPAYH 180

Query: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240
           ESSIHPFLYSQSSSRTPCSDFSSN TNPQLFLYSGTHSQ+DKDYRDISG REGVGMQAFF
Sbjct: 181 ESSIHPFLYSQSSSRTPCSDFSSNNTNPQLFLYSGTHSQADKDYRDISGPREGVGMQAFF 240

Query: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300
           PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS
Sbjct: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300

Query: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSN 342
           SRSAKTEEEDEDAETQKPLLHFFEDCPPK+SDSWLDLASNS+
Sbjct: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKTSDSWLDLASNSS 341

[Close]

BLAST of Cucsat.G12327.T3 vs. NCBI nr
Match: XP_038879726.1 (growth-regulating factor 5 isoform X2 [Benincasa hispida] >XP_038879734.1 growth-regulating factor 5 isoform X2 [Benincasa hispida])

HSP 1 Score: 634 bits (1636), Expect = 1.48e-228
Identity = 324/344 (94.19%), Postives = 332/344 (96.51%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFK+MVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKYMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSS-LTSETQSYHQPPPPAY 180
           SSTPP QTP+PLILTSTRTLSS   TPTSSSYPLSTLSSSSSS LT ETQSY+QPPP AY
Sbjct: 121 SSTPPTQTPSPLILTSTRTLSS---TPTSSSYPLSTLSSSSSSSLTCETQSYNQPPP-AY 180

Query: 181 HESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAF 240
           HESSIHPFLY QSSSR PCSDFSSN TNPQLFLYSGTHSQ+DKDYRDISG REGVGMQAF
Sbjct: 181 HESSIHPFLYHQSSSRPPCSDFSSNNTNPQLFLYSGTHSQADKDYRDISGPREGVGMQAF 240

Query: 241 FPSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNK 300
           FPSVADSARS+AEVYSQPIGMDSYKGCSQ+VSQ+HQIYSSKQARQQQEQHCFVLGTDFNK
Sbjct: 241 FPSVADSARSMAEVYSQPIGMDSYKGCSQFVSQSHQIYSSKQARQQQEQHCFVLGTDFNK 300

Query: 301 SSRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSNG 343
           SSRSAKTEEE EDAETQKPLLHFFEDCPPK+SDSWLDLASNSNG
Sbjct: 301 SSRSAKTEEEKEDAETQKPLLHFFEDCPPKNSDSWLDLASNSNG 340

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy TrEMBL
Match: A0A0A0LCW4 (Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_3G651860 PE=3 SV=1)

HSP 1 Score: 679 bits (1753), Expect = 1.59e-246
Identity = 341/342 (99.71%), Postives = 342/342 (100.00%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180
           SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH
Sbjct: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180

Query: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240
           ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF
Sbjct: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240

Query: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300
           PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS
Sbjct: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300

Query: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSN 342
           SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNS+
Sbjct: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSS 342

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy TrEMBL
Match: A0A5A7URN0 (Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G001210 PE=3 SV=1)

HSP 1 Score: 667 bits (1722), Expect = 6.03e-242
Identity = 336/343 (97.96%), Postives = 338/343 (98.54%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180
           SSTPP QTPTPLILTSTRTLSSSS TPTSSSYPLSTLSSSSS LTSETQSYHQPPPPAYH
Sbjct: 121 SSTPPTQTPTPLILTSTRTLSSSSPTPTSSSYPLSTLSSSSS-LTSETQSYHQPPPPAYH 180

Query: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240
           ESSIHPFLYSQSSSRTPCSDFSSN TNPQLFLYSGTHSQ+DKDYRDISG REGVGMQAFF
Sbjct: 181 ESSIHPFLYSQSSSRTPCSDFSSNNTNPQLFLYSGTHSQADKDYRDISGPREGVGMQAFF 240

Query: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300
           PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS
Sbjct: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300

Query: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSNG 343
           SRSAKTEEEDEDAETQKPLLHFFEDCPPK+SDSWLDLASNSNG
Sbjct: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKTSDSWLDLASNSNG 342

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy TrEMBL
Match: A0A1S3CKH6 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103501987 PE=3 SV=1)

HSP 1 Score: 667 bits (1722), Expect = 6.03e-242
Identity = 336/343 (97.96%), Postives = 338/343 (98.54%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180
           SSTPP QTPTPLILTSTRTLSSSS TPTSSSYPLSTLSSSSS LTSETQSYHQPPPPAYH
Sbjct: 121 SSTPPTQTPTPLILTSTRTLSSSSPTPTSSSYPLSTLSSSSS-LTSETQSYHQPPPPAYH 180

Query: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240
           ESSIHPFLYSQSSSRTPCSDFSSN TNPQLFLYSGTHSQ+DKDYRDISG REGVGMQAFF
Sbjct: 181 ESSIHPFLYSQSSSRTPCSDFSSNNTNPQLFLYSGTHSQADKDYRDISGPREGVGMQAFF 240

Query: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300
           PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS
Sbjct: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300

Query: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSNG 343
           SRSAKTEEEDEDAETQKPLLHFFEDCPPK+SDSWLDLASNSNG
Sbjct: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKTSDSWLDLASNSNG 342

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy TrEMBL
Match: A0A5D3C5L5 (Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001130 PE=3 SV=1)

HSP 1 Score: 663 bits (1711), Expect = 3.86e-240
Identity = 334/342 (97.66%), Postives = 337/342 (98.54%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180
           SSTPP QTPTPLILTSTRTLSSSS TPTSSSYPLSTLSSSSS LTSETQSYHQPPPPAYH
Sbjct: 121 SSTPPTQTPTPLILTSTRTLSSSSPTPTSSSYPLSTLSSSSS-LTSETQSYHQPPPPAYH 180

Query: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240
           ESSIHPFLYSQSSSRTPCSDFSSN TNPQLFLYSGTHSQ+DKDYRDISG REGVGMQAFF
Sbjct: 181 ESSIHPFLYSQSSSRTPCSDFSSNNTNPQLFLYSGTHSQADKDYRDISGPREGVGMQAFF 240

Query: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300
           PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS
Sbjct: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300

Query: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSN 342
           SRSAKTEEEDEDAETQKPLLHFFEDCPPK+SDSWLDLASNS+
Sbjct: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKTSDSWLDLASNSS 341

[Close]

BLAST of Cucsat.G12327.T3 vs. ExPASy TrEMBL
Match: A0A1S3CKJ2 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103501987 PE=3 SV=1)

HSP 1 Score: 663 bits (1711), Expect = 3.86e-240
Identity = 334/342 (97.66%), Postives = 337/342 (98.54%), Query Frame = 0


Query: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60
           MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ
Sbjct: 1   MNSSPKTCTSPFTATQWQELEHQALIFKHMVSGVPIPPDLIFSVKRSLDSSISARLFPHQ 60

Query: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120
           PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI
Sbjct: 61  PIGWGCFEMGFGRKTDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEI 120

Query: 121 SSTPPIQTPTPLILTSTRTLSSSSSTPTSSSYPLSTLSSSSSSLTSETQSYHQPPPPAYH 180
           SSTPP QTPTPLILTSTRTLSSSS TPTSSSYPLSTLSSSSS LTSETQSYHQPPPPAYH
Sbjct: 121 SSTPPTQTPTPLILTSTRTLSSSSPTPTSSSYPLSTLSSSSS-LTSETQSYHQPPPPAYH 180

Query: 181 ESSIHPFLYSQSSSRTPCSDFSSNITNPQLFLYSGTHSQSDKDYRDISGSREGVGMQAFF 240
           ESSIHPFLYSQSSSRTPCSDFSSN TNPQLFLYSGTHSQ+DKDYRDISG REGVGMQAFF
Sbjct: 181 ESSIHPFLYSQSSSRTPCSDFSSNNTNPQLFLYSGTHSQADKDYRDISGPREGVGMQAFF 240

Query: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300
           PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS
Sbjct: 241 PSVADSARSIAEVYSQPIGMDSYKGCSQYVSQNHQIYSSKQARQQQEQHCFVLGTDFNKS 300

Query: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKSSDSWLDLASNSN 342
           SRSAKTEEEDEDAETQKPLLHFFEDCPPK+SDSWLDLASNS+
Sbjct: 301 SRSAKTEEEDEDAETQKPLLHFFEDCPPKTSDSWLDLASNSS 341

The following BLAST results are available for this feature:

BLAST of Cucsat.G12327.T3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8A6	5.7e-64	44.03	Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1	[more]
A2XA73	2.0e-53	40.16	Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 S...	[more]
Q6AWY8	2.6e-53	40.59	Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3...	[more]
Q6AWY6	9.1e-38	56.64	Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3...	[more]
Q6ZIK5	9.1e-38	36.42	Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1...	[more]

BLAST of Cucsat.G12327.T3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651737.1	5.12e-248	100.00	growth-regulating factor 5 isoform X2 [Cucumis sativus] >XP_031738669.1 growth-r...	[more]
XP_004148588.1	3.28e-246	99.71	growth-regulating factor 5 isoform X1 [Cucumis sativus]	[more]
XP_008463996.1	1.25e-241	97.96	PREDICTED: growth-regulating factor 5 isoform X2 [Cucumis melo] >KAA0058523.1 gr...	[more]
XP_008463995.1	7.98e-240	97.66	PREDICTED: growth-regulating factor 5 isoform X1 [Cucumis melo] >TYK07223.1 grow...	[more]
XP_038879726.1	1.48e-228	94.19	growth-regulating factor 5 isoform X2 [Benincasa hispida] >XP_038879734.1 growth...	[more]

BLAST of Cucsat.G12327.T3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCW4	1.59e-246	99.71	Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_3G651860 PE=3 SV=1	[more]
A0A5A7URN0	6.03e-242	97.96	Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3CKH6	6.03e-242	97.96	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103501987 PE=3 SV=1	[more]
A0A5D3C5L5	3.86e-240	97.66	Growth-regulating factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CKJ2	3.86e-240	97.66	Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103501987 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014978	Glutamine-Leucine-Glutamine, QLQ	SMART	SM00951	QLQ_2	coord: 10..46 e-value: 2.4E-12 score: 57.0
IPR014978	Glutamine-Leucine-Glutamine, QLQ	PFAM	PF08880	QLQ	coord: 11..44 e-value: 2.8E-15 score: 55.8
IPR014978	Glutamine-Leucine-Glutamine, QLQ	PROSITE	PS51666	QLQ	coord: 11..46 score: 21.96147
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 77..119 e-value: 1.8E-21 score: 75.5
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 76..120 score: 24.94142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..176
None	No IPR available	PANTHER	PTHR31602:SF60	GROWTH-REGULATING FACTOR 5	coord: 9..342
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 9..342

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G12327	Cucsat.G12327	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12327.T3.E1	Cucsat.G12327.T3.E1	exon
Cucsat.G12327.T3.E2	Cucsat.G12327.T3.E2	exon
Cucsat.G12327.T3.E3	Cucsat.G12327.T3.E3	exon
Cucsat.G12327.T3.E4	Cucsat.G12327.T3.E4	exon
Cucsat.G12327.T3.E5	Cucsat.G12327.T3.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12327.T3.C1	Cucsat.G12327.T3.C1	CDS
Cucsat.G12327.T3.C2	Cucsat.G12327.T3.C2	CDS
Cucsat.G12327.T3.C3	Cucsat.G12327.T3.C3	CDS
Cucsat.G12327.T3.C4	Cucsat.G12327.T3.C4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G12327.T3	Cucsat.G12327.T3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0099402	plant organ development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding