Cucsat.G11963.T3 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G11963.T3
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionF-box domain-containing protein
Locationctg1820: 4042614 .. 4046701 (-)
RNA-Seq ExpressionCucsat.G11963.T3
SyntenyCucsat.G11963.T3
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGTTTCTGCCACAGCTTCTCTCTCAAAGGCAACCAATTAGAAAATCAGAAATTTGAAGTTTTGTAAACAAAAACCACAAATTCTTTGAGCCGCTCATTAGGCCGGAATCAAATATCTTGTTGCTCTGTGTGCCGCTCCTCTTCCACTGTCCACCACGCACCCACAAAATGGGAACTTCTCTTCTCTCAGTTCCTGCCCCATTCTTCCACTCCTCCCATCGTTCCCGATTCACCACTTCATTCCCATTTTCATCATCTAGACCCAGCCCCTTCCTCTCTTCTTCCTCCTCCTCCTCTTCTTCATCTTCGGTTGTTGATGAAGAACTCAATTCTTCTTCCCCAGATCAACTCTCTCTTCAATCTGAATCTGACCCAGATGATTCTTCCTTCAGGTATTGTTTATATTCATTCTTTTTCTCTATATCTTCAACTCACTCTGATTCTGATGTTATATGGGTTGCGTTGTCGAATGGAATGAAAACTTTATATTATGCTGTTTAGATTTCTGTTTCTACTTGGGAGTAATATGTGGGGCATCGTTTGCGTTGTACTATGAGAACTCTGTTAGAAGCAAATTTTTCTTTAAATTTTTAGCTTGCCCCTTAGCTATTATAACCCATGCCCTTGCTCATGCTCTAGTTGATGGGTCAGATAGATTTGCCAATTTTCCATGCCATTTCTAGAAAATGGTTAAACAAACATGATGTGGCAGGAACTGTATGACCTCTAGGCTTCCATTGGTCGTACTAAATCATATTGGTGTAATTAGTTGAGAAACAAGCTGACACTGGACAAGACTTGGCTCAACTATGAAAATCACTAGTACCCCATTTTGCTCGTTCCAATTGAAGGCCATGTATTTTGGTGTGTAACTGATGTGATTTTAATGAGCCCTATAATGCATATTGCAAACTAGTTGAAAGTTTCAATTCTAAGTGTTCTTCTTACTATCGATCTGGATGTATGTTTTCAAGTCATTTTCTCTTCAGATATTATAGTAATGGGGGTCAATATTATGACTTAGAACGAGTTGTGTTTGTGTTTCATTTCTTATAAATAGAGGATGTAAGGCTTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATGCAAGGTGGAATTGCAACAGTCCCTGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCAGGTGGCAGATACAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGGGAGGACCGATGCCTCTGCTAGTGTTGGTAGAAAGGACTCGTCGAGGTACAATCCTGCGATCTCTTTTTTGACTTAAATTCTTATCTTTATGTCCCTTTTGGAGTTCATACTACTGCAGTCTAACATTCTTCCTGCGTACCGAACTTTCAAAATAACCAAACCAAATGCTTGATTCCAATTCAGTGTACTTGCTATAAATGATTGTTTGGAATGACTTTTCAAGAATTTATGGTTTCTTGTTATGACTAGGAACTCTTAGAAAAGTTATTTGACAATTGCTACGGTATAACTAGTCTGTATACTTTAGGATAGATGACTCAAATTTATGTCCATTGTTTATTAGCAGACATGCAAATTTTTAAATCTATGTCAAATGGTTGTAAGTTATTACGGGACAATTGTGCGCTTGCTGACCCTCCGTTCTATTGCTCTTTGTATAACCTTAATGTACATTGAGTTTGTCTCTCTATTTTTCAATATTAATAATAGTGAGACTCATATCGTTTTCAAAAAAATAAGAAAAAAGTTATTACGAGGCAACCACATTGGATAGTGTTAGAATTAGTGGGCTTGTTGTATGTAGAAAGCCCAAATGTTTTTTAGTCTTTTATGTTGCCCTAATTATCTTTCATTATTTTAATAGGCTTCTATTGCCTATAAATTAATTTTATAATGCTCCCCTATATCATTAATTTTATAAGTAAAATTATAAGAAAGATTTGCACTGTTGTTTTTCTCCCTGAACTTTCCACATAAAACTTGTGTTTGTTCTTCGTCTCTATTTTCAATATGGTATCAAAGCATGGTATTGACCGAACGCTAGACATCAAAACTCTTTGGAAACCAAACAGAGGAGACAGCTGCCAGTATCAGTACCGCTGTCCCCACCGCCACCATCGTTGATGCTCGAATCAGTGCGCCATGGATGAGTGGTTTCGATGCCTTCAGACAACGCCAGCCAACATGATAGTCACCCTTTACGTCGTCCACGCCTCCACGCGCCGCCGTCGGGGACCAACCCATCCAGTTTAGATCACGTTGGCCAATCCTTCTCTACCACCCTTATCTTCATCTGCGACCTATAATGTCCCCCACGTGCCGCTCCATGTTCTGCCACCTAATTCCGTCAGGTCCAACCACCACTGCTTATGTAGTCAAATCTTCAAATTTGTATGCGCCGCCACCCACTCAACATTCAAGGTTGATGAATCTTTGGCACATTCTGACCAAAATTCTTTTTAGGTATATCTCACCAGCAACTGGAAGAGCTTCGATAGTAGATTGCAGCAATTGAGGCTACCTTAGGGGTGGCATCCGACACTTTTGGTCATGGCCTTCATACACCTTTACCGGTGTATTATGAGAATCCGTTAACCTTGTTCCCCACTTTATCCTCTTCGTATACAAATAATACAGTAACAAACTCTACAAAATATTTTTCAGAGAAAAAATTAAACGACAATAAATATTTCTCATGGTCTTAGTCAGTGAAAATGGTCCTTGAAGGATGACATAAATTTGGTTTTCTGACAAGGTAAGTACCACATCCTCCACTAGGAGATCCATAGGAATAGTATTGGAAGGGAGAGAACTCTCTTCTTCGATCCACATTGATCAAATAGTATAGAGCCATAGATCAGCAAACCCTTACTTTACGCTGCAATTGCTAAGGACATTTGGGGCACAACCTAGAAACTATATTCCAAATGTTAGAATGCCTCTCGCTTATACACACTACGAAAACAAGTTCATGAGTGCACGCAAGGAACTATGGATGTCACATCCTTTTTTAACAAGCTCTCTCTTATTTGGCAGGAAATGGACCTATGCAGAGAACTAATTTGGAGCAATGGTGTGCAGTCCTTTAGAATTGAAGAGATTGACAGGATTTATGCCTTTCTTGTTGGTCTTAAGTTTGATGTAGTTCGTAGGCGTATACTGGACCAGAGACCGATTCCCTCCTTGATGGAGGTTTGTTATGAAATCCGCCTTAAGGGGAATCGTACAAGTGCTATAAATATTTCAGCAACTCCTGTTATTGACTTAGCTGCTTTTAGTGCGAGGTCCTCTACTAGTGGCAGTGACAAGAACAATGGAAATTCAATTTCTGTCTATTAGCAATGCAAGAAACAATAGCCTACCCAGGTGCAATGTTGGGAGTTACATGGTCGTCCCCCAAGAGGTTAGAAATGCTCTCCTAGTGACAAACAAAGCATTGGGCATGCGTATGTGAGTGAGCCTGCTAGACCTTCTCAACCACCTGATCCACACATGGAAACCAAACCAATCTTAGTCCCACTACTCTAGGCACCATTGTCCAATCAGGTATACCTCAGTCCTTTGGTCTTATTAGTGTTGATGAGAAAAACCTTTGAATTCTGGATTCCGGTGTCGTAGATCATTTTAACTAATTCTTCTGAACATTTTGTGTCCTATATTCCATGTGTTGGTAACAAAACAATCAGAATTGCAAATGGCTCCTTAGCTTCCATTGCTGAAAAGGGAAAGATTTCTCTCTATGCAGGGCTCTCCCTACATAATGTTTTGCATGTGCCCAAAATTTCTTATAATTTGCTACCTGTAAGCAAAATTACTCATGAGTTAAACTGAGGAGCATTCTTACCTGATCCTATTTCTTTTCAAAACTTGAGCTCGAAGAGGATGATTGAGACTGCCGAGCATAGTAGGGGACTCTACCTTCTTGATGATGGCGCCTCTTCTAGTAGCACTTCTAGGACTAGTCTTTTGTCTTCCTATTTTACTACTTTTGAACAAGAGTGTATGTTATGGCATTTTCATTTAGGCCACCCTAATTTTCAATATATGAAAC

Coding sequence (CDS)

ATGGATGTCACATCCTTTTTTAACAAGCTCTCTCTTATTTGGCAGGAAATGGACCTATGCAGAGAACTAATTTGGAGCAATGGTGTGCAGTCCTTTAGAATTGAAGAGATTGACAGGATTTATGCCTTTCTTGTTGGTCTTAAGTTTGATGTAGTTCGTAGGCGTATACTGGACCAGAGACCGATTCCCTCCTTGATGGAGGTTTGTTATGAAATCCGCCTTAAGGGGAATCGTACAAGTGCTATAAATATTTCAGCAACTCCTGTTATTGACTTAGCTGCTTTTAGTGCGAGGTCCTCTACTAGTGGCAGTGACAAGAACAATGGAAATTCAATTTCTGTCTATTAG

Protein sequence

MDVTSFFNKLSLIWQEMDLCRELIWSNGVQSFRIEEIDRIYAFLVGLKFDVVRRRILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISVY
Homology
[Close]
BLAST of Cucsat.G11963.T3 vs. NCBI nr
Match: XP_031741782.1 (uncharacterized protein LOC116403961 [Cucumis sativus])

HSP 1 Score: 164 bits (416), Expect = 7.92e-49
Identity = 90/119 (75.63%), Postives = 97/119 (81.51%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           MDVTSFFNKLSLIWQEMDLCREL+W   ++GVQ  RIEE DRIY FL GL  KFDVVR R
Sbjct: 50  MDVTSFFNKLSLIWQEMDLCRELVWRDPTDGVQYSRIEENDRIYDFLAGLNPKFDVVRGR 109

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRPIPSLMEVC EIRL+ +RTSA+ ISATP ID AAFSARSS S SDK+NG  I V
Sbjct: 110 ILGQRPIPSLMEVCSEIRLEEDRTSAMYISATPTIDSAAFSARSSNSSSDKHNGKPIPV 168

[Close]
BLAST of Cucsat.G11963.T3 vs. NCBI nr
Match: KAA0066521.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 147 bits (372), Expect = 2.04e-38
Identity = 74/119 (62.18%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           +DVT++FNKLSL+WQEMDLCRE +W   ++  Q  ++EE DR+Y FL GL  KFD V  R
Sbjct: 93  LDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGR 152

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRP+PSLMEVC+E+RL+ NRT+A+ +  TP ID AAFSARSS   SDKNNG SI V
Sbjct: 153 ILGQRPLPSLMEVCFEVRLEENRTNAMGVLTTPTIDFAAFSARSSNHDSDKNNGKSIPV 211

[Close]
BLAST of Cucsat.G11963.T3 vs. NCBI nr
Match: TYK06119.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 147 bits (372), Expect = 2.05e-38
Identity = 74/119 (62.18%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           +DVT++FNKLSL+WQEMDLCRE +W   ++  Q  ++EE DR+Y FL GL  KFD V  R
Sbjct: 93  LDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGR 152

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRP+PSLMEVC+E+RL+ NRT+A+ +  TP ID AAFSARSS   SDKNNG SI V
Sbjct: 153 ILGQRPLPSLMEVCFEVRLEENRTNAMGVLTTPTIDFAAFSARSSNHDSDKNNGKSIPV 211

[Close]
BLAST of Cucsat.G11963.T3 vs. NCBI nr
Match: KAA0052172.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 147 bits (370), Expect = 3.91e-38
Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           +DVT++FNKLSL+WQEMDLCRE +W   ++  Q  ++EE DR+Y FL GL  KFD V  R
Sbjct: 278 LDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGR 337

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRP+PSLMEVC+E+RL+ +RT+A+ +  TP ID AAFSARSS   SDKNNG SISV
Sbjct: 338 ILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSISV 396

[Close]
BLAST of Cucsat.G11963.T3 vs. NCBI nr
Match: KAA0059998.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (365), Expect = 1.67e-37
Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           +DVT++FNKLSL+WQEMDLCRE +W   ++  Q  ++EE DR+Y FL GL  KFD V  R
Sbjct: 93  LDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGR 152

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRP+PSLMEVC+E+RL+ +RT+A+ +  TP ID AAFSARSS   SDKNNG SI V
Sbjct: 153 ILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPV 211

[Close]
BLAST of Cucsat.G11963.T3 vs. ExPASy TrEMBL
Match: A0A5A7VLL1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00750 PE=4 SV=1)

HSP 1 Score: 147 bits (372), Expect = 9.87e-39
Identity = 74/119 (62.18%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           +DVT++FNKLSL+WQEMDLCRE +W   ++  Q  ++EE DR+Y FL GL  KFD V  R
Sbjct: 93  LDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGR 152

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRP+PSLMEVC+E+RL+ NRT+A+ +  TP ID AAFSARSS   SDKNNG SI V
Sbjct: 153 ILGQRPLPSLMEVCFEVRLEENRTNAMGVLTTPTIDFAAFSARSSNHDSDKNNGKSIPV 211

[Close]
BLAST of Cucsat.G11963.T3 vs. ExPASy TrEMBL
Match: A0A5D3C6W4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00090 PE=4 SV=1)

HSP 1 Score: 147 bits (372), Expect = 9.94e-39
Identity = 74/119 (62.18%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           +DVT++FNKLSL+WQEMDLCRE +W   ++  Q  ++EE DR+Y FL GL  KFD V  R
Sbjct: 93  LDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGR 152

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRP+PSLMEVC+E+RL+ NRT+A+ +  TP ID AAFSARSS   SDKNNG SI V
Sbjct: 153 ILGQRPLPSLMEVCFEVRLEENRTNAMGVLTTPTIDFAAFSARSSNHDSDKNNGKSIPV 211

[Close]
BLAST of Cucsat.G11963.T3 vs. ExPASy TrEMBL
Match: A0A5A7U8U2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1589G00420 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 1.89e-38
Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           +DVT++FNKLSL+WQEMDLCRE +W   ++  Q  ++EE DR+Y FL GL  KFD V  R
Sbjct: 278 LDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGR 337

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRP+PSLMEVC+E+RL+ +RT+A+ +  TP ID AAFSARSS   SDKNNG SISV
Sbjct: 338 ILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSISV 396

[Close]
BLAST of Cucsat.G11963.T3 vs. ExPASy TrEMBL
Match: A0A5A7UXP1 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00420 PE=4 SV=1)

HSP 1 Score: 145 bits (365), Expect = 8.08e-38
Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           +DVT++FNKLSL+WQEMDLCRE +W   ++  Q  ++EE DR+Y FL GL  KFD V  R
Sbjct: 93  LDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEADRVYDFLAGLNPKFDNVCGR 152

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRP+PSLMEVC+E+RL+ +RT+A+ +  TP ID AAFSARSS   SDKNNG SI V
Sbjct: 153 ILGQRPLPSLMEVCFEVRLEEDRTNAMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPV 211

[Close]
BLAST of Cucsat.G11963.T3 vs. ExPASy TrEMBL
Match: A0A5D3C5C3 (Cysteine-rich RLK RECEPTOR-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00070 PE=4 SV=1)

HSP 1 Score: 145 bits (365), Expect = 8.46e-38
Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 1   MDVTSFFNKLSLIWQEMDLCRELIW---SNGVQSFRIEEIDRIYAFLVGL--KFDVVRRR 60
           +DVT++FNKLSL+WQEMDLCRE +W   ++  Q  ++EE+DR+Y FL GL  KFD V  R
Sbjct: 274 LDVTTYFNKLSLLWQEMDLCRETVWDTPNDSTQYAKLEEVDRVYDFLAGLNPKFDNVCGR 333

Query: 61  ILDQRPIPSLMEVCYEIRLKGNRTSAINISATPVIDLAAFSARSSTSGSDKNNGNSISV 114
           IL QRP+PSLMEVC+E+RL+ +RT+ + +  TP ID AAFSARSS   SDKNNG SI V
Sbjct: 334 ILGQRPLPSLMEVCFEVRLEEDRTNVMGVLTTPTIDSAAFSARSSNHDSDKNNGKSIPV 392

The following BLAST results are available for this feature:
BLAST of Cucsat.G11963.T3 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G11963.T3 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031741782.17.92e-4975.63uncharacterized protein LOC116403961 [Cucumis sativus][more]
KAA0066521.12.04e-3862.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK06119.12.05e-3862.18Beta-galactosidase [Cucumis melo var. makuwa][more]
KAA0052172.13.91e-3862.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0059998.11.67e-3761.34putative polyprotein [Cucumis melo var. makuwa][more]
BLAST of Cucsat.G11963.T3 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VLL19.87e-3962.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3C6W49.94e-3962.18Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G0... [more]
A0A5A7U8U21.89e-3862.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7UXP18.08e-3861.34Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340... [more]
A0A5D3C5C38.46e-3860.50Cysteine-rich RLK RECEPTOR-like protein kinase OS=Cucumis melo var. makuwa OX=11... [more]
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G11963Cucsat.G11963gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G11963.T3.E1Cucsat.G11963.T3.E1exon
Cucsat.G11963.T3.E2Cucsat.G11963.T3.E2exon
Cucsat.G11963.T3.E3Cucsat.G11963.T3.E3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G11963.T3.C1Cucsat.G11963.T3.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G11963.T3Cucsat.G11963.T3-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051276 chromosome organization
biological_process GO:0015074 DNA integration
biological_process GO:0006281 DNA repair
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding