Cucsat.G11963 (gene) Cucumber (B10) v3

Overview
NameCucsat.G11963
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionF-box domain-containing protein
Locationctg1820: 4040409 .. 4046701 (-)
RNA-Seq ExpressionCucsat.G11963
SyntenyCucsat.G11963
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCAAAAGAAAAAAGAATAATAATAATAATAAAATAATTACAACAGTTGTTTACGGTTTCGTTTCTGCCACAGCTTCTCTCTCAAAGGCAACCAATTAGAAAATCAGAAATTTGAAGTTTTGTAAACAAAAACCACAAATTCTTTGAGCCGCTCATTAGGCCGGAATCAAATATCTTGTTGCTCTGTGTGCCGCTCCTCTTCCACTGTCCACCACGCACCCACAAAATGGGAACTTCTCTTCTCTCAGTTCCTGCCCCATTCTTCCACTCCTCCCATCGTTCCCGATTCACCACTTCATTCCCATTTTCATCATCTAGACCCAGCCCCTTCCTCTCTTCTTCCTCCTCCTCCTCTTCTTCATCTTCGGTTGTTGATGAAGAACTCAATTCTTCTTCCCCAGATCAACTCTCTCTTCAATCTGAATCTGACCCAGATGATTCTTCCTTCAGGTATTGTTTATATTCATTCTTTTTCTCTATATCTTCAACTCACTCTGATTCTGATGTTATATGGGTTGCGTTGTCGAATGGAATGAAAACTTTATATTATGCTGTTTAGATTTCTGTTTCTACTTGGGAGTAATATGTGGGGCATCGTTTGCGTTGTACTATGAGAACTCTGTTAGAAGCAAATTTTTCTTTAAATTTTTAGCTTGCCCCTTAGCTATTATAACCCATGCCCTTGCTCATGCTCTAGTTGATGGGTCAGATAGATTTGCCAATTTTCCATGCCATTTCTAGAAAATGGTTAAACAAACATGATGTGGCAGGAACTGTATGACCTCTAGGCTTCCATTGGTCGTACTAAATCATATTGGTGTAATTAGTTGAGAAACAAGCTGACACTGGACAAGACTTGGCTCAACTATGAAAATCACTAGTACCCCATTTTGCTCGTTCCAATTGAAGGCCATGTATTTTGGTGTGTAACTGATGTGATTTTAATGAGCCCTATAATGCATATTGCAAACTAGTTGAAAGTTTCAATTCTAAGTGTTCTTCTTACTATCGATCTGGATGTATGTTTTCAAGTCATTTTCTCTTCAGATATTATAGTAATGGGGGTCAATATTATGACTTAGAACGAGTTGTGTTTGTGTTTCATTTCTTATAAATAGAGGATGTAAGGCTTGTGGAAAGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATGCAAGGTGGAATTGCAACAGTCCCTGGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCAGGTGGCAGATACAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGGAGGGAGGACCGATGCCTCTGCTAGTGTTGGTAGAAAGGACTCGTCGAGGTACAATCCTGCGATCTCTTTTTTGACTTAAATTCTTATCTTTATGTCCCTTTTGGAGTTCATACTACTGCAGTCTAACATTCTTCCTGCGTACCGAACTTTCAAAATAACCAAACCAAATGCTTGATTCCAATTCAGTGTACTTGCTATAAATGATTGTTTGGAATGACTTTTCAAGAATTTATGGTTTCTTGTTATGACTAGGAACTCTTAGAAAAGTTATTTGACAATTGCTACGGTATAACTAGTCTGTATACTTTAGGATAGATGACTCAAATTTATGTCCATTGTTTATTAGCAGACATGCAAATTTTTAAATCTATGTCAAATGGTTGTAAGTTATTACGGGACAATTGTGCGCTTGCTGACCCTCCGTTCTATTGCTCTTTGTATAACCTTAATGTACATTGAGTTTGTCTCTCTATTTTTCAATATTAATAATAGTGAGACTCATATCGTTTTCAAAAAAATAAGAAAAAAGTTATTACGAGGCAACCACATTGGATAGTGTTAGAATTAGTGGGCTTGTTGTATGTAGAAAGCCCAAATGTTTTTTAGTCTTTTATGTTGCCCTAATTATCTTTCATTATTTTAATAGGCTTCTATTGCCTATAAATTAATTTTATAATGCTCCCCTATATCATTAATTTTATAAGTAAAATTATAAGAAAGATTTGCACTGTTGTTTTTCTCCCTGAACTTTCCACATAAAACTTGTGTTTGTTCTTCGTCTCTATTTTCAATATGGTATCAAAGCATGGTATTGACCGAACGCTAGACATCAAAACTCTTTGGAAACCAAACAGAGGAGACAGCTGCCAGTATCAGTACCGCTGTCCCCACCGCCACCATCGTTGATGCTCGAATCAGTGCGCCATGGATGAGTGGTTTCGATGCCTTCAGACAACGCCAGCCAACATGATAGTCACCCTTTACGTCGTCCACGCCTCCACGCGCCGCCGTCGGGGACCAACCCATCCAGTTTAGATCACGTTGGCCAATCCTTCTCTACCACCCTTATCTTCATCTGCGACCTATAATGTCCCCCACGTGCCGCTCCATGTTCTGCCACCTAATTCCGTCAGGTCCAACCACCACTGCTTATGTAGTCAAATCTTCAAATTTGTATGCGCCGCCACCCACTCAACATTCAAGGTTGATGAATCTTTGGCACATTCTGACCAAAATTCTTTTTAGGTATATCTCACCAGCAACTGGAAGAGCTTCGATAGTAGATTGCAGCAATTGAGGCTACCTTAGGGGTGGCATCCGACACTTTTGGTCATGGCCTTCATACACCTTTACCGGTGTATTATGAGAATCCGTTAACCTTGTTCCCCACTTTATCCTCTTCGTATACAAATAATACAGTAACAAACTCTACAAAATATTTTTCAGAGAAAAAATTAAACGACAATAAATATTTCTCATGGTCTTAGTCAGTGAAAATGGTCCTTGAAGGATGACATAAATTTGGTTTTCTGACAAGGTAAGTACCACATCCTCCACTAGGAGATCCATAGGAATAGTATTGGAAGGGAGAGAACTCTCTTCTTCGATCCACATTGATCAAATAGTATAGAGCCATAGATCAGCAAACCCTTACTTTACGCTGCAATTGCTAAGGACATTTGGGGCACAACCTAGAAACTATATTCCAAATGTTAGAATGCCTCTCGCTTATACACACTACGAAAACAAGTTCATGAGTGCACGCAAGGAACTATGGATGTCACATCCTTTTTTAACAAGCTCTCTCTTATTTGGCAGGAAATGGACCTATGCAGAGAACTAATTTGGAGCAATGGTGTGCAGTCCTTTAGAATTGAAGAGATTGACAGGATTTATGCCTTTCTTGTTGGTCTTAAGTTTGATGTAGTTCGTAGGCGTATACTGGACCAGAGACCGATTCCCTCCTTGATGGAGGTTTGTTATGAAATCCGCCTTAAGGGGAATCGTACAAGTGCTATAAATATTTCAGCAACTCCTGTTATTGACTTAGCTGCTTTTAGTGCGAGGTCCTCTACTAGTGGCAGTGACAAGAACAATGGAAATTCAATTTCTGTCTATTAGCAATGCAAGAAACAATAGCCTACCCAGGTGCAATGTTGGGAGTTACATGGTCGTCCCCCAAGAGGTTAGAAATGCTCTCCTAGTGACAAACAAAGCATTGGGCATGCGTATGTGAGTGAGCCTGCTAGACCTTCTCAACCACCTGATCCACACATGGAAACCAAACCAATCTTAGTCCCACTACTCTAGGCACCATTGTCCAATCAGGTATACCTCAGTCCTTTGGTCTTATTAGTGTTGATGAGAAAAACCTTTGAATTCTGGATTCCGGTGTCGTAGATCATTTTAACTAATTCTTCTGAACATTTTGTGTCCTATATTCCATGTGTTGGTAACAAAACAATCAGAATTGCAAATGGCTCCTTAGCTTCCATTGCTGAAAAGGGAAAGATTTCTCTCTATGCAGGGCTCTCCCTACATAATGTTTTGCATGTGCCCAAAATTTCTTATAATTTGCTACCTGTAAGCAAAATTACTCATGAGTTAAACTGAGGAGCATTCTTACCTGATCCTATTTCTTTTCAAAACTTGAGCTCGAAGAGGATGATTGAGACTGCCGAGCATAGTAGGGGACTCTACCTTCTTGATGATGGCGCCTCTTCTAGTAGCACTTCTAGGACTAGTCTTTTGTCTTCCTATTTTACTACTTTTGAACAAGAGTGTATGTTATGGCATTTTCATTTAGGCCACCCTAATTTTCAATATATGAAACATTTATTTTCTCATCTTTTCTTTAAACTTGATGTGTCTACCTTATCTTGTGATGTATGTATTCGGACTAAACAATGTTGGGTTTCTTTTCCTTCACAACCATACAAACCAACCTACCATTTCACACTTGTTCATAGTGATGTCTGGGGACCATCCAAGATAACTATCTTATCTGGGAAATGGTGGTTTGTAACCTTTATTGATGATCATACCTGTCTTACCTGGGTCTTTTTCGTCTTCGACAAATCATAGGTTACCTCCGTCTTCAAGGACTTCATCACACCATAGAAACGCAGTTCAATGCAGTGATTGCTATTCTACAAAGTAACAATGGTCGTGAGTTCCAAAACCACACCCTCAATGAGTTTTTGTTCTCCAGAGGGATTGCCCACCAAAGTTCCTATGCCTACACGTCCGAACAAAATGGGGTAGTCGAGCACAAAAGCTGTCACCTTTTGGAGTAGCTCATTCTCTTATGTTGTCTATTTCCCTTCCTATATCTGGGGCGATGTCGTTCTCACTACCACCCATCTTATCAATCGGATGCCTTTTCATGTCCTACTTTTTCAGACCCCCTTGCCATGTCTTAAAGAGTCATATCCCTCTACCCACCTCATTTCTGATGTTCCTCTTTAGGTTTTTGGGTGCACAATCTATGTTCATAACCATGGTCCTAACCCAAATAAGTTTACCCCTCGGACCTCGGGCTCATGCATGTGTTTTTGTTGGTTACTCTCTGCACCAATGAGGCTGTAAATGCTTTCATCTATCTTCTTGTAAGTACTTTGTCTCCATGGATGTCACCTTTCTTAAGGATCGTCCTTTCTTTTCCGTTAGCCTACTTCAGAGTGAGAGTGAGAATGAGGAGTCTAATTGGGTAATTTCCTTAGAGTGAGAATGAAGATGGGGGATGAGTTTGAAATTAAAGACTTTGGGAATATGAAATACTTTCTTAGAATGGAAATTGTCAGATCTAGAGAGGGCATCTCTATATCCTAGAGGAAATACACCATTGATTGGTCAACTGAGACAAGTATGTTAGGATGTTGTCCCGCCAATACACCTATTGAATTCAATGCCAAACTCAGGGATACAGGTGACAAAGTTTTGATTGGCAAAGAGAAACTTAGCGCCTAGTGGGAAAACTTGTTTATTTATCTCACACTAGGCTTGACATCTCACATACTGTGAGTACTGTTAGTCAGTTCATGTAGACTACTTGAATAACACGGAGCCAGTAAACAGAACTTTGAAGTATTTAAAAGTAACTTTTGGTAAAGGGTTGAGATTCAGGAAAACTGACACAAGGTGTATTAAGGCCTATACAGATTATGATTAGGCAGAGTCTATTGTTGATAGAAAATCTACCTCTGGGTACTGTATTTTTGTGTGGGACAATCTCGTTACTTGGAGAAGTAAGAAGGAAGGGGTTGTTGCTAGGATCAGTGCTAAAGTTGAGTAAAGGGCCATGAGTTTGGGAATTTGTAAGGACATTTGGCTCTAGAAGGTGTTATATGATCTTCATCAGAACAATGAGATGCCTATGAAACTTTTCTGCGATAATAAGGCAGCTATTGGAATTACAAATAGCCTGATCTAACATGACATAACTAAACATGTGGAGATTGATAAACACTTTATCAAAGAGAAATTGGATAGTGGTAGCATTTACATTCCTTACACACCTTCAAGCCAACTAATTGATGATATTCTCACAAAAGAGTTTCTCAGACAGAGCTTTGAGTCTTGTGTTGAGTGGGGTCTTTTTGGCATTGATAACCCAACTTGGGGCTTTGTTGTAGGTTGAAAGCTCAAAGATTTTCTTAGTCTTTTATGTTTCCCTATTTATCTTTCATACTTTTAATTAAGCTTCTATTGCCTATAAATTAATGCTCCCCTATACCATTAGTTTTATAAGAAAATAATAAGAAAGATTTGCACTTGTGGTTTTTTCTCTTTGAACTGGGTTTTCATGTAAAACTTGTATTTGTTGTTCGTCTCTACTTTCAATCAATAGTTTTTCAAAGCTTTGGGCAATCATGTGTATTAAAGTAGTATAGGATAGCCATGGTCCTTGTGCAATCAATTTCTGAGTTATCATTTTGTTTCATTTTGATCTGTTTATTCATACCAGCCTGATAGTCAGAGAAAGTTTCTGTTAGGATCAGCCATTTAAAAAAAGGGTTCGTGAGAAATGATGCAGTTTGCATAATGTGACTTCTTGTTATTCATTGTGGTTTAGGATTTTCCCAGTTGTTTTTCCATGAATTTCCTTCATATTTAACTTTGAGTTTCTAATTTTTCAATGATGCTAATTTATCCATTTTGCACAACGCTCTTTCGTCCAGCAAGAAATAGTCAGTTAAGGGGTAACTTAGACAGGAAGGAAATGAAGAATGGGATGTCAGAATTGTTTATATGGAAAAAAGATACCAAAGGTGAAAGGGGTGATTTTTGAAGAACATGCCAAAATATTTTCTCATGGTGAATTTGATTGAAATTTGGTTAGATTCTCATTTCTTTAGGCTTCTGTAATAATATCAACAAGCTTGTATTGGGAGGTTATATTTAAATGGAAAATTTTCAAGTTTAATGCTTTGTTTGAGGCTTATCAAGATTCATTCTTTGCAGAACATTGTTTCTTTTCCAGTTGCATCTGAGATGCTATGTTTGTTCTTTCATGAATGCTTCCAATCCCAAGAACATTT

Coding sequence (CDS)

ATGATTGAGACTGCCGAGCATAGTAGGGGACTCTACCTTCTTGATGATGGCGCCTCTTCTAGTAGCACTTCTAGGACTAGTCTTTTGTCTTCCTATTTTACTACTTTTGAACAAGAGTGTATGTTATGGCATTTTCATTTAGGCCACCCTAATTTTCAATATATGAAACATTTATTTTCTCATCTTTTCTTTAAACTTGATGTGTCTACCTTATCTTGTGATGTATGTATTCGGACTAAACAATGTTGGGTTTCTTTTCCTTCACAACCATACAAACCAACCTACCATTTCACACTTGTTCATAGTGATGTCTGGGGACCATCCAAGATAACTATCTTATCTGGGAAATGGTGGTTTGTAACCTTTATTGATGATCATACCTGTCTTACCTGGGTCTTTTTCGTCTTCGACAAATCATAG

Protein sequence

MIETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFSHLFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFVTFIDDHTCLTWVFFVFDKS
Homology
[Close]
BLAST of Cucsat.G11963 vs. NCBI nr
Match: KAA0041482.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK24355.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 214 bits (545), Expect = 1.79e-64
Identity = 102/138 (73.91%), Postives = 116/138 (84.06%), Query Frame = 0 

Query: 1   MIETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFS 60
           MI+T  H++GLYLLDD ASSS+ SRTSLLSSYFTTFE++ +LWHFHLGHPNF+YMK+LF 
Sbjct: 301 MIDTIRHNKGLYLLDDDASSSTISRTSLLSSYFTTFEKDLILWHFHLGHPNFKYMKYLFP 360

Query: 61  HLFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFV 120
           HLFFK+DVS+LSCDVCI+ K   VSFPSQP KPT  FTLVHSDVW PSK T  SGK WFV
Sbjct: 361 HLFFKVDVSSLSCDVCIQAKHHQVSFPSQPCKPTRSFTLVHSDVWRPSKDTTSSGKRWFV 420

Query: 121 TFIDDHTCLTWVFFVFDK 138
           TF DDHT LTWVF + +K
Sbjct: 421 TFTDDHTRLTWVFLISEK 438

[Close]
BLAST of Cucsat.G11963 vs. NCBI nr
Match: KAA0034029.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 215 bits (548), Expect = 1.22e-63
Identity = 102/138 (73.91%), Postives = 113/138 (81.88%), Query Frame = 0 

Query: 2   IETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFSH 61
           I TA HSR LY+LDD  S SS SR SLLSSYF+T EQ+CMLWHF LGHPNF YM++LF H
Sbjct: 273 IGTARHSRRLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFPH 332

Query: 62  LFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFVT 121
           LF KLDVS+LSCDVCIR KQ  VSFPSQPYKPT  F L+HSD+WGPSK+T  SGK WFVT
Sbjct: 333 LFSKLDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDIWGPSKVTTSSGKRWFVT 392

Query: 122 FIDDHTCLTWVFFVFDKS 139
           FIDDHT LTWV+ + DKS
Sbjct: 393 FIDDHTRLTWVYLITDKS 410

[Close]
BLAST of Cucsat.G11963 vs. NCBI nr
Match: TYK08664.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (560), Expect = 2.48e-63
Identity = 104/138 (75.36%), Postives = 114/138 (82.61%), Query Frame = 0 

Query: 2   IETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFSH 61
           I TA HSRGLY+LDD  S SS SR SLLSSYF+T EQ+CMLWHF LGHPNF YM+HLF H
Sbjct: 288 IGTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPH 347

Query: 62  LFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFVT 121
           LF K+DVS+LSCDVCIR KQ  VSFPSQPYKPT  F L+HSDVWGPSK+T  SGK WFVT
Sbjct: 348 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 407

Query: 122 FIDDHTCLTWVFFVFDKS 139
           FIDDHT LTWV+ + DKS
Sbjct: 408 FIDDHTRLTWVYLISDKS 425

[Close]
BLAST of Cucsat.G11963 vs. NCBI nr
Match: TYJ97685.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (560), Expect = 2.51e-63
Identity = 104/138 (75.36%), Postives = 114/138 (82.61%), Query Frame = 0 

Query: 2   IETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFSH 61
           I TA HSRGLY+LDD  S SS SR SLLSSYF+T EQ+CMLWHF LGHPNF YM+HLF H
Sbjct: 288 IGTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPH 347

Query: 62  LFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFVT 121
           LF K+DVS+LSCDVCIR KQ  VSFPSQPYKPT  F L+HSDVWGPSK+T  SGK WFVT
Sbjct: 348 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 407

Query: 122 FIDDHTCLTWVFFVFDKS 139
           FIDDHT LTWV+ + DKS
Sbjct: 408 FIDDHTRLTWVYLISDKS 425

[Close]
BLAST of Cucsat.G11963 vs. NCBI nr
Match: TYK11735.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (560), Expect = 2.51e-63
Identity = 104/138 (75.36%), Postives = 114/138 (82.61%), Query Frame = 0 

Query: 2   IETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFSH 61
           I TA HSRGLY+LDD  S SS SR SLLSSYF+T EQ+CMLWHF LGHPNF YM+HLF H
Sbjct: 288 IGTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPH 347

Query: 62  LFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFVT 121
           LF K+DVS+LSCDVCIR KQ  VSFPSQPYKPT  F L+HSDVWGPSK+T  SGK WFVT
Sbjct: 348 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 407

Query: 122 FIDDHTCLTWVFFVFDKS 139
           FIDDHT LTWV+ + DKS
Sbjct: 408 FIDDHTRLTWVYLISDKS 425

[Close]
BLAST of Cucsat.G11963 vs. ExPASy TrEMBL
Match: A0A5D3DL54 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001350 PE=4 SV=1)

HSP 1 Score: 214 bits (545), Expect = 8.66e-65
Identity = 102/138 (73.91%), Postives = 116/138 (84.06%), Query Frame = 0 

Query: 1   MIETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFS 60
           MI+T  H++GLYLLDD ASSS+ SRTSLLSSYFTTFE++ +LWHFHLGHPNF+YMK+LF 
Sbjct: 301 MIDTIRHNKGLYLLDDDASSSTISRTSLLSSYFTTFEKDLILWHFHLGHPNFKYMKYLFP 360

Query: 61  HLFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFV 120
           HLFFK+DVS+LSCDVCI+ K   VSFPSQP KPT  FTLVHSDVW PSK T  SGK WFV
Sbjct: 361 HLFFKVDVSSLSCDVCIQAKHHQVSFPSQPCKPTRSFTLVHSDVWRPSKDTTSSGKRWFV 420

Query: 121 TFIDDHTCLTWVFFVFDK 138
           TF DDHT LTWVF + +K
Sbjct: 421 TFTDDHTRLTWVFLISEK 438

[Close]
BLAST of Cucsat.G11963 vs. ExPASy TrEMBL
Match: A0A5A7SXY5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00130 PE=4 SV=1)

HSP 1 Score: 215 bits (548), Expect = 5.91e-64
Identity = 102/138 (73.91%), Postives = 113/138 (81.88%), Query Frame = 0 

Query: 2   IETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFSH 61
           I TA HSR LY+LDD  S SS SR SLLSSYF+T EQ+CMLWHF LGHPNF YM++LF H
Sbjct: 273 IGTARHSRRLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQYLFPH 332

Query: 62  LFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFVT 121
           LF KLDVS+LSCDVCIR KQ  VSFPSQPYKPT  F L+HSD+WGPSK+T  SGK WFVT
Sbjct: 333 LFSKLDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDIWGPSKVTTSSGKRWFVT 392

Query: 122 FIDDHTCLTWVFFVFDKS 139
           FIDDHT LTWV+ + DKS
Sbjct: 393 FIDDHTRLTWVYLITDKS 410

[Close]
BLAST of Cucsat.G11963 vs. ExPASy TrEMBL
Match: A0A5D3CBR3 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold118G00070 PE=4 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.20e-63
Identity = 104/138 (75.36%), Postives = 114/138 (82.61%), Query Frame = 0 

Query: 2   IETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFSH 61
           I TA HSRGLY+LDD  S SS SR SLLSSYF+T EQ+CMLWHF LGHPNF YM+HLF H
Sbjct: 288 IGTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPH 347

Query: 62  LFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFVT 121
           LF K+DVS+LSCDVCIR KQ  VSFPSQPYKPT  F L+HSDVWGPSK+T  SGK WFVT
Sbjct: 348 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 407

Query: 122 FIDDHTCLTWVFFVFDKS 139
           FIDDHT LTWV+ + DKS
Sbjct: 408 FIDDHTRLTWVYLISDKS 425

[Close]
BLAST of Cucsat.G11963 vs. ExPASy TrEMBL
Match: A0A5D3BGT3 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00600 PE=4 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.22e-63
Identity = 104/138 (75.36%), Postives = 114/138 (82.61%), Query Frame = 0 

Query: 2   IETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFSH 61
           I TA HSRGLY+LDD  S SS SR SLLSSYF+T EQ+CMLWHF LGHPNF YM+HLF H
Sbjct: 288 IGTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPH 347

Query: 62  LFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFVT 121
           LF K+DVS+LSCDVCIR KQ  VSFPSQPYKPT  F L+HSDVWGPSK+T  SGK WFVT
Sbjct: 348 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 407

Query: 122 FIDDHTCLTWVFFVFDKS 139
           FIDDHT LTWV+ + DKS
Sbjct: 408 FIDDHTRLTWVYLISDKS 425

[Close]
BLAST of Cucsat.G11963 vs. ExPASy TrEMBL
Match: A0A5D3CJM2 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00520 PE=4 SV=1)

HSP 1 Score: 220 bits (560), Expect = 1.22e-63
Identity = 104/138 (75.36%), Postives = 114/138 (82.61%), Query Frame = 0 

Query: 2   IETAEHSRGLYLLDDGASSSSTSRTSLLSSYFTTFEQECMLWHFHLGHPNFQYMKHLFSH 61
           I TA HSRGLY+LDD  S SS SR SLLSSYF+T EQ+CMLWHF LGHPNF YM+HLF H
Sbjct: 288 IGTARHSRGLYILDDDTSCSSLSRVSLLSSYFSTSEQDCMLWHFRLGHPNFTYMQHLFPH 347

Query: 62  LFFKLDVSTLSCDVCIRTKQCWVSFPSQPYKPTYHFTLVHSDVWGPSKITILSGKWWFVT 121
           LF K+DVS+LSCDVCIR KQ  VSFPSQPYKPT  F L+HSDVWGPSK+T  SGK WFVT
Sbjct: 348 LFSKVDVSSLSCDVCIRAKQHRVSFPSQPYKPTQPFNLIHSDVWGPSKVTTSSGKRWFVT 407

Query: 122 FIDDHTCLTWVFFVFDKS 139
           FIDDHT LTWV+ + DKS
Sbjct: 408 FIDDHTRLTWVYLISDKS 425

The following BLAST results are available for this feature:
BLAST of Cucsat.G11963 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G11963 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0041482.11.79e-6473.91Beta-galactosidase [Cucumis melo var. makuwa] >TYK24355.1 Beta-galactosidase [Cu... [more]
KAA0034029.11.22e-6373.91Beta-galactosidase [Cucumis melo var. makuwa][more]
TYK08664.12.48e-6375.36Beta-galactosidase [Cucumis melo var. makuwa][more]
TYJ97685.12.51e-6375.36Beta-galactosidase [Cucumis melo var. makuwa][more]
TYK11735.12.51e-6375.36Beta-galactosidase [Cucumis melo var. makuwa][more]
BLAST of Cucsat.G11963 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DL548.66e-6573.91Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G0... [more]
A0A5A7SXY55.91e-6473.91Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00... [more]
A0A5D3CBR31.20e-6375.36Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold118G0... [more]
A0A5D3BGT31.22e-6375.36Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00... [more]
A0A5D3CJM21.22e-6375.36Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G0... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G11963.T1Cucsat.G11963.T1mRNA
Cucsat.G11963.T2Cucsat.G11963.T2mRNA
Cucsat.G11963.T4Cucsat.G11963.T4mRNA
Cucsat.G11963.T3Cucsat.G11963.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051276 chromosome organization
biological_process GO:0015074 DNA integration
biological_process GO:0006281 DNA repair
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding