Cp4.1LG20g01980.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g01980.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Integral membrane HPP family protein
Location	Cp4.1LG20: 1176145 .. 1178800 (-)
Sequence length	1594
RNA-Seq Expression	Cp4.1LG20g01980.1
Synteny	Cp4.1LG20g01980.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTCGACTGTCATTTTACTTTCAAGAAAGTCAAACCGGTAACAGGAATTGACAATCTCCTGACCCATTTGAAATGGTGATATAAAAGCAGGTGGACTTTAAATCCCATATCACAGCTTGGTTGGAGGGTTAAGGTTGTTTTTAGTCATTGCAGATAAGGACAAGCACGATGGGACAGAGAGAAACAGAGCGAAACAGAGCGAAACAGAGAGGCTGCCTGCTGCTATTCTTTATTCATTTTTTCCATATGGTTTAGCCTTTCGGGAATGGCCTTTGGACCTCTTCAAAGGCCAACTCCGCAACACAGCTTCGAGTTTTTATCTGTTTTTTTCCTTTTCAAGCCCTCTGGCGTTCTTCACAGCTTTTCCCAAATCCCATACCCCTCCAGATGGTGTCTTTGTCAGCCTCACCTTTCAATATATTATTTCTCAAACTTTGTTTTGCGGCTTTTACCATACTTTCTTTCTTTGTCTTCATCTTCTCCCCTGTTTTGTCTCCAAACAATCGAAGCTTGGAGGTGGGTCGAGGGTAAAATCCAGTATGAGTCTGCAATTGAAGCCAATTCACCACCGTGGCCAGCAGCCGTATCAACCCAGTTTCCGTGTAAACCATTCATTCATTTCTTTGCTGCCCAATTGCCATTTATTGAATGGAAAACGAGGGGTTTCAATAGATGGGTCTGTTAGGCCGTTGGGATTATTACTCAACGATCGGAGGAGAAGACGAAATGGGGGCGGCGGCGGTGGACTCAGTTACAGGAGTATTGTGGCGTCCGGCATTGCTGGTGCACCGATTTCAGATGGGTCGAAACCAGACAAAGGCTTTGTTTCTCCTCCCCTCAGTGATATCCTTTGGCCTTCTGCAGGTTAGAGAAGGTCCCTTATGAATCATAATCTATGAGAATTTCGACCGTGATGAAGAACTGCGAGATGGGTAACGTTGTTTTGTCATGAATGAAACAGGGGCATTTGCAGCGATGGCAATGCTGGGGAAAATGGATCAGATTCTAGCGCCAAAAGGGCTTTCTATGACAATTGCGCCATTAGGAGCCGTCTGTGCTATCCTGTTCGCAGCGCCCTCATCCCCTGCTGCTCGAGTACTCGCCACATCTCTGACAGCTCAATTGCTTTGAACCAAGAACTAAATTTAGGTTTCTTTTGGTGCAGAAGTACAATATGTTCATGGCCCAGATTGGGTGTGCGGCAATTGGCGTTTTGGCGTTTACTTTGTTGGGGCCTGGATGGCTGGCTAGAAGCTCTGCTCTGGCTGCATCCATGGCGTTCATGATCTATACTGGTTCGACGCACCCACCAGGTTAAATTGAAGCCCCACTCAATTTGTGGTCTGTGTGTTTGGGAATATGGATTGAATTTGATTTTTTATTGTAATGTTAACAGCTGCAAGTTTGCCGCTAATGTTCATCGATGGAGCTAAGATGCAGCATCTCAATTTCTGGTATGCTCTGTTTCCCGGTGCCGCTGGTTGTGTTCTCCTTTGCTTCATAGTGAGTTCTCTCTGTTTCACTATTAATATATTTCTTTCTTTTCTTCATATTTTAAAATCCGATCATAATTGGTAGGCGAGATCTTAATCTTAGATCCATGACTAAGCAATAATAGGACGTTGAATGCTGATTCATCATGAATTTATAAACAAGAAATATTATCTTCATTAGAACGAGGCCTTTTATGAAAGCCCAAATCAAAGCCATGAGCACTTATGCGAACAATATCATATCATTGTGGAGAGTCGTTCATCTAAATTAACTAGATGAATATAGAAGCTCGGTTAGAAAATTTTAGACCCATTGTGGTTAGTGAGTTAGTTAGTGACCCAAATAACTTGAATAATGTTCCGAATCCAACCCAATTCAACACTTTGTCGGGATTGAAAAAAACTCTTCCAATTATTTAAAAACTTTCAAACTCACTACTATGTCCTCTTTGGATATTTTCGAGATTCTTCTCAAGATCTTTAAAATGTGTCTAGCAGTGAGAGGTTTCCACACCCTAATAAACAATATTTCGTTCTCACCCTCGACCGACGTGAGATCTCACAATAAGTCACAATGTACCATTGACATTTATTACCTATGTCAAATGTGTCGTTGGGTTGAGATGTGAACGTTATTTTTGGATTGGCTAAGCCAAAAAGTTCCTAACATATGAACTAAATTGAAAATTTTAACCAACCCAACATAACCCTAACCGTTTAAGTTGGATAGTTTGAATTTTTCGAATCACATGAACGTTGTTTGCTGTTAATAACTATATGAACTAGACACAAATTCGAAAGTGATTATTATTATTTTGTGATGCAGCAAGAGATAGTGGTGTACTTGAAGGAGAAGTTCAAATTTTGAGCAGGTTTTGGAGTGTCATACATGGATCAGCCATTATTGAAGGTGTCCCAAAGCTCATTTTTGTGAGTTTTGATTCAATGGATGATAGCCTTGGAGTGTCACACATGAAACGATGATATGATACGATATGATACGATACGATACGATACGTATTTTTCTTTTTTCTTTTTCATAAATCAAATGGTTATCGAAATCGTCAAACTTAGAATTAGATGTAAATAAGCATGATCTCGTGTAATCATTTACAATAGGTTAGTGTAAGTATCTAAATAATTTCATCAATATGCTAGAG

mRNA sequence

TTTCCTCGACTGTCATTTTACTTTCAAGAAAGTCAAACCGGTAACAGGAATTGACAATCTCCTGACCCATTTGAAATGGTGATATAAAAGCAGGTGGACTTTAAATCCCATATCACAGCTTGGTTGGAGGGTTAAGGTTGTTTTTAGTCATTGCAGATAAGGACAAGCACGATGGGACAGAGAGAAACAGAGCGAAACAGAGCGAAACAGAGAGGCTGCCTGCTGCTATTCTTTATTCATTTTTTCCATATGGTTTAGCCTTTCGGGAATGGCCTTTGGACCTCTTCAAAGGCCAACTCCGCAACACAGCTTCGAGTTTTTATCTGTTTTTTTCCTTTTCAAGCCCTCTGGCGTTCTTCACAGCTTTTCCCAAATCCCATACCCCTCCAGATGGTGTCTTTGTCAGCCTCACCTTTCAATATATTATTTCTCAAACTTTGTTTTGCGGCTTTTACCATACTTTCTTTCTTTGTCTTCATCTTCTCCCCTGTTTTGTCTCCAAACAATCGAAGCTTGGAGGTGGGTCGAGGGTAAAATCCAGTATGAGTCTGCAATTGAAGCCAATTCACCACCGTGGCCAGCAGCCGTATCAACCCAGTTTCCGTGTAAACCATTCATTCATTTCTTTGCTGCCCAATTGCCATTTATTGAATGGAAAACGAGGGGTTTCAATAGATGGGTCTGTTAGGCCGTTGGGATTATTACTCAACGATCGGAGGAGAAGACGAAATGGGGGCGGCGGCGGTGGACTCAGTTACAGGAGTATTGTGGCGTCCGGCATTGCTGGTGCACCGATTTCAGATGGGTCGAAACCAGACAAAGGCTTTGTTTCTCCTCCCCTCAGTGATATCCTTTGGCCTTCTGCAGGGGCATTTGCAGCGATGGCAATGCTGGGGAAAATGGATCAGATTCTAGCGCCAAAAGGGCTTTCTATGACAATTGCGCCATTAGGAGCCGTCTGTGCTATCCTGTTCGCAGCGCCCTCATCCCCTGCTGCTCGAAAGTACAATATGTTCATGGCCCAGATTGGGTGTGCGGCAATTGGCGTTTTGGCGTTTACTTTGTTGGGGCCTGGATGGCTGGCTAGAAGCTCTGCTCTGGCTGCATCCATGGCGTTCATGATCTATACTGGTTCGACGCACCCACCAGCTGCAAGTTTGCCGCTAATGTTCATCGATGGAGCTAAGATGCAGCATCTCAATTTCTGGTATGCTCTGTTTCCCGGTGCCGCTGGTTGTGTTCTCCTTTGCTTCATAGTGACAAGAGATAGTGGTGTACTTGAAGGAGAAGTTCAAATTTTGAGCAGGTTTTGGAGTGTCATACATGGATCAGCCATTATTGAAGGTGTCCCAAAGCTCATTTTTGTGAGTTTTGATTCAATGGATGATAGCCTTGGAGTGTCACACATGAAACGATGATATGATACGATATGATACGATACGATACGATACGTATTTTTCTTTTTTCTTTTTCATAAATCAAATGGTTATCGAAATCGTCAAACTTAGAATTAGATGTAAATAAGCATGATCTCGTGTAATCATTTACAATAGGTTAGTGTAAGTATCTAAATAATTTCATCAATATGCTAGAG

Coding sequence (CDS)

ATGAGTCTGCAATTGAAGCCAATTCACCACCGTGGCCAGCAGCCGTATCAACCCAGTTTCCGTGTAAACCATTCATTCATTTCTTTGCTGCCCAATTGCCATTTATTGAATGGAAAACGAGGGGTTTCAATAGATGGGTCTGTTAGGCCGTTGGGATTATTACTCAACGATCGGAGGAGAAGACGAAATGGGGGCGGCGGCGGTGGACTCAGTTACAGGAGTATTGTGGCGTCCGGCATTGCTGGTGCACCGATTTCAGATGGGTCGAAACCAGACAAAGGCTTTGTTTCTCCTCCCCTCAGTGATATCCTTTGGCCTTCTGCAGGGGCATTTGCAGCGATGGCAATGCTGGGGAAAATGGATCAGATTCTAGCGCCAAAAGGGCTTTCTATGACAATTGCGCCATTAGGAGCCGTCTGTGCTATCCTGTTCGCAGCGCCCTCATCCCCTGCTGCTCGAAAGTACAATATGTTCATGGCCCAGATTGGGTGTGCGGCAATTGGCGTTTTGGCGTTTACTTTGTTGGGGCCTGGATGGCTGGCTAGAAGCTCTGCTCTGGCTGCATCCATGGCGTTCATGATCTATACTGGTTCGACGCACCCACCAGCTGCAAGTTTGCCGCTAATGTTCATCGATGGAGCTAAGATGCAGCATCTCAATTTCTGGTATGCTCTGTTTCCCGGTGCCGCTGGTTGTGTTCTCCTTTGCTTCATAGTGACAAGAGATAGTGGTGTACTTGAAGGAGAAGTTCAAATTTTGAGCAGGTTTTGGAGTGTCATACATGGATCAGCCATTATTGAAGGTGTCCCAAAGCTCATTTTTGTGAGTTTTGATTCAATGGATGATAGCCTTGGAGTGTCACACATGAAACGATGA

Protein sequence

MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRRRRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFIVTRDSGVLEGEVQILSRFWSVIHGSAIIEGVPKLIFVSFDSMDDSLGVSHMKR

Homology

[Close]

BLAST of Cp4.1LG20g01980.1 vs. NCBI nr
Match: XP_023519271.1 (uncharacterized protein LOC111782708 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475 bits (1223), Expect = 5.99e-168
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
           MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60

Query: 61  RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
           RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61  RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120

Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
           DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180

Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
           ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238

[Close]

BLAST of Cp4.1LG20g01980.1 vs. NCBI nr
Match: XP_023519272.1 (uncharacterized protein LOC111782708 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 468 bits (1205), Expect = 3.20e-165
Identity = 237/238 (99.58%), Postives = 237/238 (99.58%), Query Frame = 0


Query: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
           MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60

Query: 61  RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
           RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61  RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120

Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
           DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR YNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR-YNMFMAQIGCAAIGVLAFTLLGPGWL 180

Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
           ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 237

[Close]

BLAST of Cp4.1LG20g01980.1 vs. NCBI nr
Match: XP_022924027.1 (uncharacterized protein LOC111431576 isoform X1 [Cucurbita moschata] >KAG6584258.1 hypothetical protein SDJN03_20190, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 468 bits (1204), Expect = 4.71e-165
Identity = 234/238 (98.32%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
           MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60

Query: 61  RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
           RRNGGGGGG  YRSIVASGIA APISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61  RRNGGGGGGFGYRSIVASGIARAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120

Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
           DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180

Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
           ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGC+LLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCLLLCFI 238

[Close]

BLAST of Cp4.1LG20g01980.1 vs. NCBI nr
Match: XP_023001510.1 (uncharacterized protein LOC111495629 [Cucurbita maxima])

HSP 1 Score: 462 bits (1189), Expect = 9.42e-163
Identity = 232/239 (97.07%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
           M+LQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNG RG SIDGSVRPLGLLLNDRRR
Sbjct: 1   MNLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGNRGFSIDGSVRPLGLLLNDRRR 60

Query: 61  RRNGGGGG-GLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 120
           RRNGGGGG G+ YRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK
Sbjct: 61  RRNGGGGGDGIGYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 120

Query: 121 MDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 180
           MDQ+LAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW
Sbjct: 121 MDQMLAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 180

Query: 181 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
           LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI
Sbjct: 181 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 239

[Close]

BLAST of Cp4.1LG20g01980.1 vs. NCBI nr
Match: XP_022924028.1 (uncharacterized protein LOC111431576 isoform X2 [Cucurbita moschata])

HSP 1 Score: 461 bits (1186), Expect = 2.51e-162
Identity = 233/238 (97.90%), Postives = 234/238 (98.32%), Query Frame = 0


Query: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
           MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60

Query: 61  RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
           RRNGGGGGG  YRSIVASGIA APISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61  RRNGGGGGGFGYRSIVASGIARAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120

Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
           DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR YNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR-YNMFMAQIGCAAIGVLAFTLLGPGWL 180

Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
           ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGC+LLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCLLLCFI 237

[Close]

BLAST of Cp4.1LG20g01980.1 vs. ExPASy TrEMBL
Match: A0A6J1E7R0 (uncharacterized protein LOC111431576 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431576 PE=4 SV=1)

HSP 1 Score: 468 bits (1204), Expect = 2.28e-165
Identity = 234/238 (98.32%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
           MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60

Query: 61  RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
           RRNGGGGGG  YRSIVASGIA APISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61  RRNGGGGGGFGYRSIVASGIARAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120

Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
           DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180

Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
           ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGC+LLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCLLLCFI 238

[Close]

BLAST of Cp4.1LG20g01980.1 vs. ExPASy TrEMBL
Match: A0A6J1KLD7 (uncharacterized protein LOC111495629 OS=Cucurbita maxima OX=3661 GN=LOC111495629 PE=4 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 4.56e-163
Identity = 232/239 (97.07%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
           M+LQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNG RG SIDGSVRPLGLLLNDRRR
Sbjct: 1   MNLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGNRGFSIDGSVRPLGLLLNDRRR 60

Query: 61  RRNGGGGG-GLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 120
           RRNGGGGG G+ YRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK
Sbjct: 61  RRNGGGGGDGIGYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 120

Query: 121 MDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 180
           MDQ+LAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW
Sbjct: 121 MDQMLAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 180

Query: 181 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
           LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI
Sbjct: 181 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 239

[Close]

BLAST of Cp4.1LG20g01980.1 vs. ExPASy TrEMBL
Match: A0A6J1EB70 (uncharacterized protein LOC111431576 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431576 PE=4 SV=1)

HSP 1 Score: 461 bits (1186), Expect = 1.21e-162
Identity = 233/238 (97.90%), Postives = 234/238 (98.32%), Query Frame = 0


Query: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
           MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1   MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60

Query: 61  RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
           RRNGGGGGG  YRSIVASGIA APISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61  RRNGGGGGGFGYRSIVASGIARAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120

Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
           DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR YNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR-YNMFMAQIGCAAIGVLAFTLLGPGWL 180

Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
           ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGC+LLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCLLLCFI 237

[Close]

BLAST of Cp4.1LG20g01980.1 vs. ExPASy TrEMBL
Match: A0A0A0LR37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045560 PE=4 SV=1)

HSP 1 Score: 373 bits (958), Expect = 1.07e-127
Identity = 196/258 (75.97%), Postives = 214/258 (82.95%), Query Frame = 0


Query: 1   MSLQLKPIHHR----------GQQPYQPSF----------RVNHSFISLLPNCHLLNGKR 60
           MSLQLKPIHH             +PYQPS+           +NHSF+SLLP+CHLLNGKR
Sbjct: 1   MSLQLKPIHHHLHHYGGRPCHNNEPYQPSYIENIQVPSGCMLNHSFVSLLPSCHLLNGKR 60

Query: 61  GVSIDGSVRPLGLLLNDRRRRRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPL 120
           G+S     R LGL  ND RRRRN G    + +RSIVAS IAG P+SDGSKP+KGFVSPPL
Sbjct: 61  GIS----ARSLGLF-NDWRRRRNRGSDR-IGHRSIVASSIAGTPVSDGSKPEKGFVSPPL 120

Query: 121 SDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMA 180
           SDILWPSAGAFAAMA+LGKMDQILAPKGLSMTIAPLGAVCA+LFA PS+PAARKYN+F+A
Sbjct: 121 SDILWPSAGAFAAMALLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFLA 180

Query: 181 QIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLN 238
           QIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLP++FIDGAKMQ LN
Sbjct: 181 QIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKMQQLN 240

[Close]

BLAST of Cp4.1LG20g01980.1 vs. ExPASy TrEMBL
Match: A0A1S3AUM8 (uncharacterized protein LOC103482985 OS=Cucumis melo OX=3656 GN=LOC103482985 PE=4 SV=1)

HSP 1 Score: 373 bits (957), Expect = 1.41e-127
Identity = 197/256 (76.95%), Postives = 214/256 (83.59%), Query Frame = 0


Query: 1   MSLQLKPIHHR--------GQQPYQPSFR----------VNHSFISLLPNCHLLNGKRGV 60
           MSLQLKPIHH           +PYQPS+R          +NHS +SLLP CHLLNGKRG+
Sbjct: 1   MSLQLKPIHHHLHHHGGRHCHKPYQPSYREKIQAPSACMLNHSLVSLLPICHLLNGKRGI 60

Query: 61  SIDGSVRPLGLLLNDRRRRRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSD 120
                VR LGL  ND RRRR+ G  G + +RSIVAS IAG P+SDGSKP+KGFVSPPLSD
Sbjct: 61  P----VRSLGLF-NDWRRRRSRGSDG-IGHRSIVASSIAGTPVSDGSKPEKGFVSPPLSD 120

Query: 121 ILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQI 180
           ILWPSAGAFAAMA+LGKMDQILAPKGLSMTIAPLGAVCA+LFA PS+PAARKYN+FMAQI
Sbjct: 121 ILWPSAGAFAAMALLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFMAQI 180

Query: 181 GCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFW 238
           GCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLP++FIDGAKMQ LNFW
Sbjct: 181 GCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKMQQLNFW 240

[Close]

BLAST of Cp4.1LG20g01980.1 vs. TAIR 10
Match: AT3G47980.1 (Integral membrane HPP family protein )

HSP 1 Score: 235.3 bits (599), Expect = 6.0e-62
Identity = 130/239 (54.39%), Postives = 167/239 (69.87%), Query Frame = 0


Query: 2   SLQLKPIHHRGQQPYQPSFRVNHSFISL-LPNCHLLN-GKRGVSIDGSVRPLGLLLNDRR 61
           SL +KP+     Q +  +  +  S +++     H L     G+ ID SVR +  L +   
Sbjct: 3   SLPVKPLPSGHLQLHSRNLIIPPSMVTVGFKRHHFLGVSSYGLCIDESVRHMRSLRSSSN 62

Query: 62  RRRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 121
           RRR     G      + +S    A   +  KP+K  V+P LSD++WP+AGAFAAMA++G+
Sbjct: 63  RRRVSKSAG--VSMPVASSDDFPAVSWESWKPEKTTVAPSLSDVIWPAAGAFAAMAIMGR 122

Query: 122 MDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 181
           +DQ+L PKG+SM++APLGAV AILF  PS+PAARKYNMF AQIGCAAIGVLAF+  GP W
Sbjct: 123 IDQMLNPKGISMSVAPLGAVSAILFTTPSAPAARKYNMFTAQIGCAAIGVLAFSAFGPSW 182

Query: 182 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 239
           LARS+ALAAS+AFM+ T + HPPAASLPL+FIDGAK+  LNFWYALFPGAA C+LLCF+
Sbjct: 183 LARSTALAASIAFMVITRANHPPAASLPLLFIDGAKLHKLNFWYALFPGAAACILLCFL 239

[Close]

BLAST of Cp4.1LG20g01980.1 vs. TAIR 10
Match: AT5G62720.1 (Integral membrane HPP family protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.5e-60
Identity = 114/166 (68.67%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 75  IVASGIAGAPISDGSKPDKGFVSPP--LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMT 134
           + ++G   AP  D  KPDK   +    LSD++WP+AGAFAAMA+LG+MDQ+L+PKG+SM+
Sbjct: 65  VASAGNLTAPSWDSWKPDKTAAATALLLSDVIWPAAGAFAAMALLGRMDQMLSPKGISMS 124

Query: 135 IAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWLARSSALAASMAF 194
           +APLGAV AILF  PS+PAARKYN+F+AQIGCAAIGV+AF++ GPGWLARS ALAAS+AF
Sbjct: 125 VAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVAFSVFGPGWLARSVALAASIAF 184

Query: 195 MIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 239
           M+ T + HPPAASLPLMFIDGAK  HLNFWYALFPGAA CV+LC +
Sbjct: 185 MVITRANHPPAASLPLMFIDGAKFHHLNFWYALFPGAAACVILCLL 230

[Close]

BLAST of Cp4.1LG20g01980.1 vs. TAIR 10
Match: AT5G62720.2 (Integral membrane HPP family protein )

HSP 1 Score: 166.4 bits (420), Expect = 3.4e-41
Identity = 86/136 (63.24%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 75  IVASGIAGAPISDGSKPDKGFVSPP--LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMT 134
           + ++G   AP  D  KPDK   +    LSD++WP+AGAFAAMA+LG+MDQ+L+PKG+SM+
Sbjct: 65  VASAGNLTAPSWDSWKPDKTAAATALLLSDVIWPAAGAFAAMALLGRMDQMLSPKGISMS 124

Query: 135 IAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWLARSSALAASMAF 194
           +APLGAV AILF  PS+PAARKYN+F+AQIGCAAIGV+AF++ GPGWLARS ALAAS+AF
Sbjct: 125 VAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVAFSVFGPGWLARSVALAASIAF 184

Query: 195 MIYTGSTHPPAASLPL 209
           M+ T + HPP   L L
Sbjct: 185 MVITRANHPPGKYLLL 200

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g01980.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g01980.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519271.1	5.99e-168	100.00	uncharacterized protein LOC111782708 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023519272.1	3.20e-165	99.58	uncharacterized protein LOC111782708 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022924027.1	4.71e-165	98.32	uncharacterized protein LOC111431576 isoform X1 [Cucurbita moschata] >KAG6584258...	[more]
XP_023001510.1	9.42e-163	97.07	uncharacterized protein LOC111495629 [Cucurbita maxima]	[more]
XP_022924028.1	2.51e-162	97.90	uncharacterized protein LOC111431576 isoform X2 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG20g01980.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7R0	2.28e-165	98.32	uncharacterized protein LOC111431576 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KLD7	4.56e-163	97.07	uncharacterized protein LOC111495629 OS=Cucurbita maxima OX=3661 GN=LOC111495629...	[more]
A0A6J1EB70	1.21e-162	97.90	uncharacterized protein LOC111431576 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LR37	1.07e-127	75.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045560 PE=4 SV=1	[more]
A0A1S3AUM8	1.41e-127	76.95	uncharacterized protein LOC103482985 OS=Cucumis melo OX=3656 GN=LOC103482985 PE=...	[more]

BLAST of Cp4.1LG20g01980.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47980.1	6.0e-62	54.39	Integral membrane HPP family protein	[more]
AT5G62720.1	1.5e-60	68.67	Integral membrane HPP family protein	[more]
AT5G62720.2	3.4e-41	63.24	Integral membrane HPP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007065	HPP	PFAM	PF04982	HPP	coord: 133..238 e-value: 2.0E-21 score: 76.4
None	No IPR available	PANTHER	PTHR33741:SF3	BNAA06G16970D PROTEIN	coord: 40..239
None	No IPR available	PANTHER	PTHR33741	TRANSMEMBRANE PROTEIN DDB_G0269096-RELATED	coord: 40..239

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG20g01980	Cp4.1LG20g01980	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g01980.1:three_prime_utr:001	Cp4.1LG20g01980.1:three_prime_utr:001	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g01980.1:exon:005	Cp4.1LG20g01980.1:exon:005	exon
Cp4.1LG20g01980.1:exon:004	Cp4.1LG20g01980.1:exon:004	exon
Cp4.1LG20g01980.1:exon:003	Cp4.1LG20g01980.1:exon:003	exon
Cp4.1LG20g01980.1:exon:002	Cp4.1LG20g01980.1:exon:002	exon
Cp4.1LG20g01980.1:exon:001	Cp4.1LG20g01980.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g01980.1:cds:001	Cp4.1LG20g01980.1:cds:001	CDS
Cp4.1LG20g01980.1:cds:002	Cp4.1LG20g01980.1:cds:002	CDS
Cp4.1LG20g01980.1:cds:003	Cp4.1LG20g01980.1:cds:003	CDS
Cp4.1LG20g01980.1:cds:004	Cp4.1LG20g01980.1:cds:004	CDS
Cp4.1LG20g01980.1:cds:005	Cp4.1LG20g01980.1:cds:005	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g01980.1:five_prime_utr:001	Cp4.1LG20g01980.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g01980.1	Cp4.1LG20g01980.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane