Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCTCGACTGTCATTTTACTTTCAAGAAAGTCAAACCGGTAACAGGAATTGACAATCTCCTGACCCATTTGAAATGGTGATATAAAAGCAGGTGGACTTTAAATCCCATATCACAGCTTGGTTGGAGGGTTAAGGTTGTTTTTAGTCATTGCAGATAAGGACAAGCACGATGGGACAGAGAGAAACAGAGCGAAACAGAGCGAAACAGAGAGGCTGCCTGCTGCTATTCTTTATTCATTTTTTCCATATGGTTTAGCCTTTCGGGAATGGCCTTTGGACCTCTTCAAAGGCCAACTCCGCAACACAGCTTCGAGTTTTTATCTGTTTTTTTCCTTTTCAAGCCCTCTGGCGTTCTTCACAGCTTTTCCCAAATCCCATACCCCTCCAGATGGTGTCTTTGTCAGCCTCACCTTTCAATATATTATTTCTCAAACTTTGTTTTGCGGCTTTTACCATACTTTCTTTCTTTGTCTTCATCTTCTCCCCTGTTTTGTCTCCAAACAATCGAAGCTTGGAGGTGGGTCGAGGGTAAAATCCAGTATGAGTCTGCAATTGAAGCCAATTCACCACCGTGGCCAGCAGCCGTATCAACCCAGTTTCCGTGTAAACCATTCATTCATTTCTTTGCTGCCCAATTGCCATTTATTGAATGGAAAACGAGGGGTTTCAATAGATGGGTCTGTTAGGCCGTTGGGATTATTACTCAACGATCGGAGGAGAAGACGAAATGGGGGCGGCGGCGGTGGACTCAGTTACAGGAGTATTGTGGCGTCCGGCATTGCTGGTGCACCGATTTCAGATGGGTCGAAACCAGACAAAGGCTTTGTTTCTCCTCCCCTCAGTGATATCCTTTGGCCTTCTGCAGGTTAGAGAAGGTCCCTTATGAATCATAATCTATGAGAATTTCGACCGTGATGAAGAACTGCGAGATGGGTAACGTTGTTTTGTCATGAATGAAACAGGGGCATTTGCAGCGATGGCAATGCTGGGGAAAATGGATCAGATTCTAGCGCCAAAAGGGCTTTCTATGACAATTGCGCCATTAGGAGCCGTCTGTGCTATCCTGTTCGCAGCGCCCTCATCCCCTGCTGCTCGAGTACTCGCCACATCTCTGACAGCTCAATTGCTTTGAACCAAGAACTAAATTTAGGTTTCTTTTGGTGCAGAAGTACAATATGTTCATGGCCCAGATTGGGTGTGCGGCAATTGGCGTTTTGGCGTTTACTTTGTTGGGGCCTGGATGGCTGGCTAGAAGCTCTGCTCTGGCTGCATCCATGGCGTTCATGATCTATACTGGTTCGACGCACCCACCAGGTTAAATTGAAGCCCCACTCAATTTGTGGTCTGTGTGTTTGGGAATATGGATTGAATTTGATTTTTTATTGTAATGTTAACAGCTGCAAGTTTGCCGCTAATGTTCATCGATGGAGCTAAGATGCAGCATCTCAATTTCTGGTATGCTCTGTTTCCCGGTGCCGCTGGTTGTGTTCTCCTTTGCTTCATAGTGAGTTCTCTCTGTTTCACTATTAATATATTTCTTTCTTTTCTTCATATTTTAAAATCCGATCATAATTGGTAGGCGAGATCTTAATCTTAGATCCATGACTAAGCAATAATAGGACGTTGAATGCTGATTCATCATGAATTTATAAACAAGAAATATTATCTTCATTAGAACGAGGCCTTTTATGAAAGCCCAAATCAAAGCCATGAGCACTTATGCGAACAATATCATATCATTGTGGAGAGTCGTTCATCTAAATTAACTAGATGAATATAGAAGCTCGGTTAGAAAATTTTAGACCCATTGTGGTTAGTGAGTTAGTTAGTGACCCAAATAACTTGAATAATGTTCCGAATCCAACCCAATTCAACACTTTGTCGGGATTGAAAAAAACTCTTCCAATTATTTAAAAACTTTCAAACTCACTACTATGTCCTCTTTGGATATTTTCGAGATTCTTCTCAAGATCTTTAAAATGTGTCTAGCAGTGAGAGGTTTCCACACCCTAATAAACAATATTTCGTTCTCACCCTCGACCGACGTGAGATCTCACAATAAGTCACAATGTACCATTGACATTTATTACCTATGTCAAATGTGTCGTTGGGTTGAGATGTGAACGTTATTTTTGGATTGGCTAAGCCAAAAAGTTCCTAACATATGAACTAAATTGAAAATTTTAACCAACCCAACATAACCCTAACCGTTTAAGTTGGATAGTTTGAATTTTTCGAATCACATGAACGTTGTTTGCTGTTAATAACTATATGAACTAGACACAAATTCGAAAGTGATTATTATTATTTTGTGATGCAGCAAGAGATAGTGGTGTACTTGAAGGAGAAGTTCAAATTTTGAGCAGGTTTTGGAGTGTCATACATGGATCAGCCATTATTGAAGGTGTCCCAAAGCTCATTTTTGTGAGTTTTGATTCAATGGATGATAGCCTTGGAGTGTCACACATGAAACGATGATATGATACGATATGATACGATACGATACGATACGTATTTTTCTTTTTTCTTTTTCATAAATCAAATGGTTATCGAAATCGTCAAACTTAGAATTAGATGTAAATAAGCATGATCTCGTGTAATCATTTACAATAGGTTAGTGTAAGTATCTAAATAATTTCATCAATATGCTAGAG
mRNA sequence
TTTCCTCGACTGTCATTTTACTTTCAAGAAAGTCAAACCGGTAACAGGAATTGACAATCTCCTGACCCATTTGAAATGGTGATATAAAAGCAGGTGGACTTTAAATCCCATATCACAGCTTGGTTGGAGGGTTAAGGTTGTTTTTAGTCATTGCAGATAAGGACAAGCACGATGGGACAGAGAGAAACAGAGCGAAACAGAGCGAAACAGAGAGGCTGCCTGCTGCTATTCTTTATTCATTTTTTCCATATGGTTTAGCCTTTCGGGAATGGCCTTTGGACCTCTTCAAAGGCCAACTCCGCAACACAGCTTCGAGTTTTTATCTGTTTTTTTCCTTTTCAAGCCCTCTGGCGTTCTTCACAGCTTTTCCCAAATCCCATACCCCTCCAGATGGTGTCTTTGTCAGCCTCACCTTTCAATATATTATTTCTCAAACTTTGTTTTGCGGCTTTTACCATACTTTCTTTCTTTGTCTTCATCTTCTCCCCTGTTTTGTCTCCAAACAATCGAAGCTTGGAGGTGGGTCGAGGGTAAAATCCAGTATGAGTCTGCAATTGAAGCCAATTCACCACCGTGGCCAGCAGCCGTATCAACCCAGTTTCCGTGTAAACCATTCATTCATTTCTTTGCTGCCCAATTGCCATTTATTGAATGGAAAACGAGGGGTTTCAATAGATGGGTCTGTTAGGCCGTTGGGATTATTACTCAACGATCGGAGGAGAAGACGAAATGGGGGCGGCGGCGGTGGACTCAGTTACAGGAGTATTGTGGCGTCCGGCATTGCTGGTGCACCGATTTCAGATGGGTCGAAACCAGACAAAGGCTTTGTTTCTCCTCCCCTCAGTGATATCCTTTGGCCTTCTGCAGGGGCATTTGCAGCGATGGCAATGCTGGGGAAAATGGATCAGATTCTAGCGCCAAAAGGGCTTTCTATGACAATTGCGCCATTAGGAGCCGTCTGTGCTATCCTGTTCGCAGCGCCCTCATCCCCTGCTGCTCGAAAGTACAATATGTTCATGGCCCAGATTGGGTGTGCGGCAATTGGCGTTTTGGCGTTTACTTTGTTGGGGCCTGGATGGCTGGCTAGAAGCTCTGCTCTGGCTGCATCCATGGCGTTCATGATCTATACTGGTTCGACGCACCCACCAGCTGCAAGTTTGCCGCTAATGTTCATCGATGGAGCTAAGATGCAGCATCTCAATTTCTGGTATGCTCTGTTTCCCGGTGCCGCTGGTTGTGTTCTCCTTTGCTTCATAGTGACAAGAGATAGTGGTGTACTTGAAGGAGAAGTTCAAATTTTGAGCAGGTTTTGGAGTGTCATACATGGATCAGCCATTATTGAAGGTGTCCCAAAGCTCATTTTTGTGAGTTTTGATTCAATGGATGATAGCCTTGGAGTGTCACACATGAAACGATGATATGATACGATATGATACGATACGATACGATACGTATTTTTCTTTTTTCTTTTTCATAAATCAAATGGTTATCGAAATCGTCAAACTTAGAATTAGATGTAAATAAGCATGATCTCGTGTAATCATTTACAATAGGTTAGTGTAAGTATCTAAATAATTTCATCAATATGCTAGAG
Coding sequence (CDS)
ATGAGTCTGCAATTGAAGCCAATTCACCACCGTGGCCAGCAGCCGTATCAACCCAGTTTCCGTGTAAACCATTCATTCATTTCTTTGCTGCCCAATTGCCATTTATTGAATGGAAAACGAGGGGTTTCAATAGATGGGTCTGTTAGGCCGTTGGGATTATTACTCAACGATCGGAGGAGAAGACGAAATGGGGGCGGCGGCGGTGGACTCAGTTACAGGAGTATTGTGGCGTCCGGCATTGCTGGTGCACCGATTTCAGATGGGTCGAAACCAGACAAAGGCTTTGTTTCTCCTCCCCTCAGTGATATCCTTTGGCCTTCTGCAGGGGCATTTGCAGCGATGGCAATGCTGGGGAAAATGGATCAGATTCTAGCGCCAAAAGGGCTTTCTATGACAATTGCGCCATTAGGAGCCGTCTGTGCTATCCTGTTCGCAGCGCCCTCATCCCCTGCTGCTCGAAAGTACAATATGTTCATGGCCCAGATTGGGTGTGCGGCAATTGGCGTTTTGGCGTTTACTTTGTTGGGGCCTGGATGGCTGGCTAGAAGCTCTGCTCTGGCTGCATCCATGGCGTTCATGATCTATACTGGTTCGACGCACCCACCAGCTGCAAGTTTGCCGCTAATGTTCATCGATGGAGCTAAGATGCAGCATCTCAATTTCTGGTATGCTCTGTTTCCCGGTGCCGCTGGTTGTGTTCTCCTTTGCTTCATAGTGACAAGAGATAGTGGTGTACTTGAAGGAGAAGTTCAAATTTTGAGCAGGTTTTGGAGTGTCATACATGGATCAGCCATTATTGAAGGTGTCCCAAAGCTCATTTTTGTGAGTTTTGATTCAATGGATGATAGCCTTGGAGTGTCACACATGAAACGATGA
Protein sequence
MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRRRRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFIVTRDSGVLEGEVQILSRFWSVIHGSAIIEGVPKLIFVSFDSMDDSLGVSHMKR
Homology
BLAST of Cp4.1LG20g01980 vs. NCBI nr
Match:
XP_023519271.1 (uncharacterized protein LOC111782708 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 475 bits (1223), Expect = 5.99e-168
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
Query: 61 RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61 RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
BLAST of Cp4.1LG20g01980 vs. NCBI nr
Match:
XP_023519272.1 (uncharacterized protein LOC111782708 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 468 bits (1205), Expect = 3.20e-165
Identity = 237/238 (99.58%), Postives = 237/238 (99.58%), Query Frame = 0
Query: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
Query: 61 RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61 RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR YNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR-YNMFMAQIGCAAIGVLAFTLLGPGWL 180
Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 237
BLAST of Cp4.1LG20g01980 vs. NCBI nr
Match:
XP_022924027.1 (uncharacterized protein LOC111431576 isoform X1 [Cucurbita moschata] >KAG6584258.1 hypothetical protein SDJN03_20190, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 468 bits (1204), Expect = 4.71e-165
Identity = 234/238 (98.32%), Postives = 235/238 (98.74%), Query Frame = 0
Query: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
Query: 61 RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
RRNGGGGGG YRSIVASGIA APISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61 RRNGGGGGGFGYRSIVASGIARAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGC+LLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCLLLCFI 238
BLAST of Cp4.1LG20g01980 vs. NCBI nr
Match:
XP_023001510.1 (uncharacterized protein LOC111495629 [Cucurbita maxima])
HSP 1 Score: 462 bits (1189), Expect = 9.42e-163
Identity = 232/239 (97.07%), Postives = 235/239 (98.33%), Query Frame = 0
Query: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
M+LQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNG RG SIDGSVRPLGLLLNDRRR
Sbjct: 1 MNLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGNRGFSIDGSVRPLGLLLNDRRR 60
Query: 61 RRNGGGGG-GLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 120
RRNGGGGG G+ YRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK
Sbjct: 61 RRNGGGGGDGIGYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 120
Query: 121 MDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 180
MDQ+LAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW
Sbjct: 121 MDQMLAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 180
Query: 181 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI
Sbjct: 181 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 239
BLAST of Cp4.1LG20g01980 vs. NCBI nr
Match:
XP_022924028.1 (uncharacterized protein LOC111431576 isoform X2 [Cucurbita moschata])
HSP 1 Score: 461 bits (1186), Expect = 2.51e-162
Identity = 233/238 (97.90%), Postives = 234/238 (98.32%), Query Frame = 0
Query: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
Query: 61 RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
RRNGGGGGG YRSIVASGIA APISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61 RRNGGGGGGFGYRSIVASGIARAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR YNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR-YNMFMAQIGCAAIGVLAFTLLGPGWL 180
Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGC+LLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCLLLCFI 237
BLAST of Cp4.1LG20g01980 vs. ExPASy TrEMBL
Match:
A0A6J1E7R0 (uncharacterized protein LOC111431576 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431576 PE=4 SV=1)
HSP 1 Score: 468 bits (1204), Expect = 2.28e-165
Identity = 234/238 (98.32%), Postives = 235/238 (98.74%), Query Frame = 0
Query: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
Query: 61 RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
RRNGGGGGG YRSIVASGIA APISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61 RRNGGGGGGFGYRSIVASGIARAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGC+LLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCLLLCFI 238
BLAST of Cp4.1LG20g01980 vs. ExPASy TrEMBL
Match:
A0A6J1KLD7 (uncharacterized protein LOC111495629 OS=Cucurbita maxima OX=3661 GN=LOC111495629 PE=4 SV=1)
HSP 1 Score: 462 bits (1189), Expect = 4.56e-163
Identity = 232/239 (97.07%), Postives = 235/239 (98.33%), Query Frame = 0
Query: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
M+LQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNG RG SIDGSVRPLGLLLNDRRR
Sbjct: 1 MNLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGNRGFSIDGSVRPLGLLLNDRRR 60
Query: 61 RRNGGGGG-GLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 120
RRNGGGGG G+ YRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK
Sbjct: 61 RRNGGGGGDGIGYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 120
Query: 121 MDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 180
MDQ+LAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW
Sbjct: 121 MDQMLAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 180
Query: 181 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI
Sbjct: 181 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 239
BLAST of Cp4.1LG20g01980 vs. ExPASy TrEMBL
Match:
A0A6J1EB70 (uncharacterized protein LOC111431576 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431576 PE=4 SV=1)
HSP 1 Score: 461 bits (1186), Expect = 1.21e-162
Identity = 233/238 (97.90%), Postives = 234/238 (98.32%), Query Frame = 0
Query: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR
Sbjct: 1 MSLQLKPIHHRGQQPYQPSFRVNHSFISLLPNCHLLNGKRGVSIDGSVRPLGLLLNDRRR 60
Query: 61 RRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
RRNGGGGGG YRSIVASGIA APISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM
Sbjct: 61 RRNGGGGGGFGYRSIVASGIARAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGKM 120
Query: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWL 180
DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR YNMFMAQIGCAAIGVLAFTLLGPGWL
Sbjct: 121 DQILAPKGLSMTIAPLGAVCAILFAAPSSPAAR-YNMFMAQIGCAAIGVLAFTLLGPGWL 180
Query: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 238
ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGC+LLCFI
Sbjct: 181 ARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCLLLCFI 237
BLAST of Cp4.1LG20g01980 vs. ExPASy TrEMBL
Match:
A0A0A0LR37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045560 PE=4 SV=1)
HSP 1 Score: 373 bits (958), Expect = 1.07e-127
Identity = 196/258 (75.97%), Postives = 214/258 (82.95%), Query Frame = 0
Query: 1 MSLQLKPIHHR----------GQQPYQPSF----------RVNHSFISLLPNCHLLNGKR 60
MSLQLKPIHH +PYQPS+ +NHSF+SLLP+CHLLNGKR
Sbjct: 1 MSLQLKPIHHHLHHYGGRPCHNNEPYQPSYIENIQVPSGCMLNHSFVSLLPSCHLLNGKR 60
Query: 61 GVSIDGSVRPLGLLLNDRRRRRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPL 120
G+S R LGL ND RRRRN G + +RSIVAS IAG P+SDGSKP+KGFVSPPL
Sbjct: 61 GIS----ARSLGLF-NDWRRRRNRGSDR-IGHRSIVASSIAGTPVSDGSKPEKGFVSPPL 120
Query: 121 SDILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMA 180
SDILWPSAGAFAAMA+LGKMDQILAPKGLSMTIAPLGAVCA+LFA PS+PAARKYN+F+A
Sbjct: 121 SDILWPSAGAFAAMALLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFLA 180
Query: 181 QIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLN 238
QIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLP++FIDGAKMQ LN
Sbjct: 181 QIGCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKMQQLN 240
BLAST of Cp4.1LG20g01980 vs. ExPASy TrEMBL
Match:
A0A1S3AUM8 (uncharacterized protein LOC103482985 OS=Cucumis melo OX=3656 GN=LOC103482985 PE=4 SV=1)
HSP 1 Score: 373 bits (957), Expect = 1.41e-127
Identity = 197/256 (76.95%), Postives = 214/256 (83.59%), Query Frame = 0
Query: 1 MSLQLKPIHHR--------GQQPYQPSFR----------VNHSFISLLPNCHLLNGKRGV 60
MSLQLKPIHH +PYQPS+R +NHS +SLLP CHLLNGKRG+
Sbjct: 1 MSLQLKPIHHHLHHHGGRHCHKPYQPSYREKIQAPSACMLNHSLVSLLPICHLLNGKRGI 60
Query: 61 SIDGSVRPLGLLLNDRRRRRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSD 120
VR LGL ND RRRR+ G G + +RSIVAS IAG P+SDGSKP+KGFVSPPLSD
Sbjct: 61 P----VRSLGLF-NDWRRRRSRGSDG-IGHRSIVASSIAGTPVSDGSKPEKGFVSPPLSD 120
Query: 121 ILWPSAGAFAAMAMLGKMDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQI 180
ILWPSAGAFAAMA+LGKMDQILAPKGLSMTIAPLGAVCA+LFA PS+PAARKYN+FMAQI
Sbjct: 121 ILWPSAGAFAAMALLGKMDQILAPKGLSMTIAPLGAVCAVLFATPSAPAARKYNIFMAQI 180
Query: 181 GCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFW 238
GCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLP++FIDGAKMQ LNFW
Sbjct: 181 GCAAIGVLAFTLLGPGWLARSSALAASMAFMIYTGSTHPPAASLPILFIDGAKMQQLNFW 240
BLAST of Cp4.1LG20g01980 vs. TAIR 10
Match:
AT3G47980.1 (Integral membrane HPP family protein )
HSP 1 Score: 235.3 bits (599), Expect = 6.0e-62
Identity = 130/239 (54.39%), Postives = 167/239 (69.87%), Query Frame = 0
Query: 2 SLQLKPIHHRGQQPYQPSFRVNHSFISL-LPNCHLLN-GKRGVSIDGSVRPLGLLLNDRR 61
SL +KP+ Q + + + S +++ H L G+ ID SVR + L +
Sbjct: 3 SLPVKPLPSGHLQLHSRNLIIPPSMVTVGFKRHHFLGVSSYGLCIDESVRHMRSLRSSSN 62
Query: 62 RRRNGGGGGGLSYRSIVASGIAGAPISDGSKPDKGFVSPPLSDILWPSAGAFAAMAMLGK 121
RRR G + +S A + KP+K V+P LSD++WP+AGAFAAMA++G+
Sbjct: 63 RRRVSKSAG--VSMPVASSDDFPAVSWESWKPEKTTVAPSLSDVIWPAAGAFAAMAIMGR 122
Query: 122 MDQILAPKGLSMTIAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGW 181
+DQ+L PKG+SM++APLGAV AILF PS+PAARKYNMF AQIGCAAIGVLAF+ GP W
Sbjct: 123 IDQMLNPKGISMSVAPLGAVSAILFTTPSAPAARKYNMFTAQIGCAAIGVLAFSAFGPSW 182
Query: 182 LARSSALAASMAFMIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 239
LARS+ALAAS+AFM+ T + HPPAASLPL+FIDGAK+ LNFWYALFPGAA C+LLCF+
Sbjct: 183 LARSTALAASIAFMVITRANHPPAASLPLLFIDGAKLHKLNFWYALFPGAAACILLCFL 239
BLAST of Cp4.1LG20g01980 vs. TAIR 10
Match:
AT5G62720.1 (Integral membrane HPP family protein )
HSP 1 Score: 230.7 bits (587), Expect = 1.5e-60
Identity = 114/166 (68.67%), Postives = 139/166 (83.73%), Query Frame = 0
Query: 75 IVASGIAGAPISDGSKPDKGFVSPP--LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMT 134
+ ++G AP D KPDK + LSD++WP+AGAFAAMA+LG+MDQ+L+PKG+SM+
Sbjct: 65 VASAGNLTAPSWDSWKPDKTAAATALLLSDVIWPAAGAFAAMALLGRMDQMLSPKGISMS 124
Query: 135 IAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWLARSSALAASMAF 194
+APLGAV AILF PS+PAARKYN+F+AQIGCAAIGV+AF++ GPGWLARS ALAAS+AF
Sbjct: 125 VAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVAFSVFGPGWLARSVALAASIAF 184
Query: 195 MIYTGSTHPPAASLPLMFIDGAKMQHLNFWYALFPGAAGCVLLCFI 239
M+ T + HPPAASLPLMFIDGAK HLNFWYALFPGAA CV+LC +
Sbjct: 185 MVITRANHPPAASLPLMFIDGAKFHHLNFWYALFPGAAACVILCLL 230
BLAST of Cp4.1LG20g01980 vs. TAIR 10
Match:
AT5G62720.2 (Integral membrane HPP family protein )
HSP 1 Score: 166.4 bits (420), Expect = 3.4e-41
Identity = 86/136 (63.24%), Postives = 109/136 (80.15%), Query Frame = 0
Query: 75 IVASGIAGAPISDGSKPDKGFVSPP--LSDILWPSAGAFAAMAMLGKMDQILAPKGLSMT 134
+ ++G AP D KPDK + LSD++WP+AGAFAAMA+LG+MDQ+L+PKG+SM+
Sbjct: 65 VASAGNLTAPSWDSWKPDKTAAATALLLSDVIWPAAGAFAAMALLGRMDQMLSPKGISMS 124
Query: 135 IAPLGAVCAILFAAPSSPAARKYNMFMAQIGCAAIGVLAFTLLGPGWLARSSALAASMAF 194
+APLGAV AILF PS+PAARKYN+F+AQIGCAAIGV+AF++ GPGWLARS ALAAS+AF
Sbjct: 125 VAPLGAVSAILFITPSAPAARKYNIFLAQIGCAAIGVVAFSVFGPGWLARSVALAASIAF 184
Query: 195 MIYTGSTHPPAASLPL 209
M+ T + HPP L L
Sbjct: 185 MVITRANHPPGKYLLL 200
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023519271.1 | 5.99e-168 | 100.00 | uncharacterized protein LOC111782708 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_023519272.1 | 3.20e-165 | 99.58 | uncharacterized protein LOC111782708 isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
XP_022924027.1 | 4.71e-165 | 98.32 | uncharacterized protein LOC111431576 isoform X1 [Cucurbita moschata] >KAG6584258... | [more] |
XP_023001510.1 | 9.42e-163 | 97.07 | uncharacterized protein LOC111495629 [Cucurbita maxima] | [more] |
XP_022924028.1 | 2.51e-162 | 97.90 | uncharacterized protein LOC111431576 isoform X2 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E7R0 | 2.28e-165 | 98.32 | uncharacterized protein LOC111431576 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1KLD7 | 4.56e-163 | 97.07 | uncharacterized protein LOC111495629 OS=Cucurbita maxima OX=3661 GN=LOC111495629... | [more] |
A0A6J1EB70 | 1.21e-162 | 97.90 | uncharacterized protein LOC111431576 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A0A0LR37 | 1.07e-127 | 75.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045560 PE=4 SV=1 | [more] |
A0A1S3AUM8 | 1.41e-127 | 76.95 | uncharacterized protein LOC103482985 OS=Cucumis melo OX=3656 GN=LOC103482985 PE=... | [more] |