CmoCh04G025110.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGATTCAGAGTCTCGCCGGACCACAATCGGGTCATACCCGACCCACATCCGACCCCCCACCACCCGCCCTCCCTCAATGCCCACCATCTTGCTCCAATCGATCCGCCGAAATCTGTGCTTCCGTTGATTCCGGCAAACCCAGAGACGGCGGTGATGTCGACCAGGCCTGTAATCGGAAACAAAGCCGGCGACGGAAAAGCGAAATCTGTGCTTCCGTTGATCGCAGAGACGGCGGTGACGTCGACGGGGACGTTGACCGATTCTCACGGGTACAGAGTCGGCATCGGAAAAGGGAAATCTGAAATTTCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGAACTTCCTCAAATCGCTGTTCCGTCGCCCGCCGGAAACCCACAACGGCCCCAAACCCATTGCCGATTACCAGTAA ATGCGATTCAGAGTCTCGCCGGACCACAATCGGGTCATACCCGACCCACATCCGACCCCCCACCACCCGCCCTCCCTCAATGCCCACCATCTTGCTCCAATCGATCCGCCGAAATCTGTGCTTCCGTTGATTCCGGCAAACCCAGAGACGGCGGTGATGTCGACCAGGCCTGTAATCGGAAACAAAGCCGGCGACGGAAAAGCGAAATCTGTGCTTCCGTTGATCGCAGAGACGGCGGTGACGTCGACGGGGACGTTGACCGATTCTCACGGGTACAGAGTCGGCATCGGAAAAGGGAAATCTGAAATTTCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGAACTTCCTCAAATCGCTGTTCCGTCGCCCGCCGGAAACCCACAACGGCCCCAAACCCATTGCCGATTACCAGTAA ATGCGATTCAGAGTCTCGCCGGACCACAATCGGGTCATACCCGACCCACATCCGACCCCCCACCACCCGCCCTCCCTCAATGCCCACCATCTTGCTCCAATCGATCCGCCGAAATCTGTGCTTCCGTTGATTCCGGCAAACCCAGAGACGGCGGTGATGTCGACCAGGCCTGTAATCGGAAACAAAGCCGGCGACGGAAAAGCGAAATCTGTGCTTCCGTTGATCGCAGAGACGGCGGTGACGTCGACGGGGACGTTGACCGATTCTCACGGGTACAGAGTCGGCATCGGAAAAGGGAAATCTGAAATTTCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGAACTTCCTCAAATCGCTGTTCCGTCGCCCGCCGGAAACCCACAACGGCCCCAAACCCATTGCCGATTACCAGTAA MRFRVSPDHNRVIPDPHPTPHHPPSLNAHHLAPIDPPKSVLPLIPANPETAVMSTRPVIGNKAGDGKAKSVLPLIAETAVTSTGTLTDSHGYRVGIGKGKSEISKRRKLVKTMMYHCIKNFLKSLFRRPPETHNGPKPIADYQ Homology
BLAST of CmoCh04G025110.1 vs. ExPASy TrEMBL
Match: A0A0A0KDQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374710 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05 Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of CmoCh04G025110.1 vs. ExPASy TrEMBL
Match: A0A6J1CJW3 (uncharacterized protein LOC111011963 OS=Momordica charantia OX=3673 GN=LOC111011963 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.2e-04 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of CmoCh04G025110.1 vs. NCBI nr
Match: KAG6602132.1 (hypothetical protein SDJN03_07365, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 278.1 bits (710), Expect = 4.3e-71 Identity = 137/143 (95.80%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of CmoCh04G025110.1 vs. NCBI nr
Match: KAG6602131.1 (hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 180.6 bits (457), Expect = 9.3e-42 Identity = 101/167 (60.48%), Postives = 116/167 (69.46%), Query Frame = 0
BLAST of CmoCh04G025110.1 vs. NCBI nr
Match: KAG6602134.1 (hypothetical protein SDJN03_07367, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 143.3 bits (360), Expect = 1.6e-30 Identity = 84/143 (58.74%), Postives = 99/143 (69.23%), Query Frame = 0
BLAST of CmoCh04G025110.1 vs. NCBI nr
Match: KAE8647260.1 (hypothetical protein Csa_018328, partial [Cucumis sativus]) HSP 1 Score: 58.9 bits (141), Expect = 4.1e-05 Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of CmoCh04G025110.1 vs. NCBI nr
Match: XP_022141661.1 (uncharacterized protein LOC111011963 [Momordica charantia]) HSP 1 Score: 55.5 bits (132), Expect = 4.5e-04 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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