Cla97C02G045980.1 (mRNA) Watermelon (97103) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATGAGGAGTTTTTTTGGGAGGAGCTGCGGCGGAGATCGGACGGCGACTTTCCGGCGGCGGAGGAAGTGTGCTTTTGGGATAAGCTTCTTAATAATGGTAATTTTGAGGAAGTGCTTCTGGTGGAACCGCTTCTGGAAAAGAGTGATTTGGAGGAAGAAGAAGAAGAAGAAGAAGAAGCTGCTGATTCCTTTTTTGAAAGCTTCCATTTTTCTTCCATGTAA ATGGATGATGAGGAGTTTTTTTGGGAGGAGCTGCGGCGGAGATCGGACGGCGACTTTCCGGCGGCGGAGGAAGTGTGCTTTTGGGATAAGCTTCTTAATAATGGTAATTTTGAGGAAGTGCTTCTGGTGGAACCGCTTCTGGAAAAGAGTGATTTGGAGGAAGAAGAAGAAGAAGAAGAAGAAGCTGCTGATTCCTTTTTTGAAAGCTTCCATTTTTCTTCCATGTAA ATGGATGATGAGGAGTTTTTTTGGGAGGAGCTGCGGCGGAGATCGGACGGCGACTTTCCGGCGGCGGAGGAAGTGTGCTTTTGGGATAAGCTTCTTAATAATGGTAATTTTGAGGAAGTGCTTCTGGTGGAACCGCTTCTGGAAAAGAGTGATTTGGAGGAAGAAGAAGAAGAAGAAGAAGAAGCTGCTGATTCCTTTTTTGAAAGCTTCCATTTTTCTTCCATGTAA MDDEEFFWEELRRRSDGDFPAAEEVCFWDKLLNNGNFEEVLLVEPLLEKSDLEEEEEEEEEAADSFFESFHFSSM Homology
BLAST of Cla97C02G045980.1 vs. NCBI nr
Match: KAG6570691.1 (hypothetical protein SDJN03_29606, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 104.8 bits (260), Expect = 3.4e-19 Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of Cla97C02G045980.1 vs. NCBI nr
Match: KAE8646962.1 (hypothetical protein Csa_020732, partial [Cucumis sativus]) HSP 1 Score: 102.4 bits (254), Expect = 1.7e-18 Identity = 59/78 (75.64%), Postives = 65/78 (83.33%), Query Frame = 0
BLAST of Cla97C02G045980.1 vs. ExPASy TrEMBL
Match: A0A0A0KBR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190260 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.2e-19 Identity = 59/79 (74.68%), Postives = 66/79 (83.54%), Query Frame = 0
BLAST of Cla97C02G045980.1 vs. TAIR 10
Match: AT1G07485.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, pedicel; EXPRESSED DURING: 4 anthesis, D bilateral stage; Has 5 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 1.1e-04 Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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