Cla97C02G045980 (gene) Watermelon (97103) v2.5

Overview
NameCla97C02G045980
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. 97103 (Watermelon (97103) v2.5)
DescriptionUnknown protein
LocationCla97Chr02: 33904283 .. 33904510 (+)
RNA-Seq ExpressionCla97C02G045980
SyntenyCla97C02G045980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATGAGGAGTTTTTTTGGGAGGAGCTGCGGCGGAGATCGGACGGCGACTTTCCGGCGGCGGAGGAAGTGTGCTTTTGGGATAAGCTTCTTAATAATGGTAATTTTGAGGAAGTGCTTCTGGTGGAACCGCTTCTGGAAAAGAGTGATTTGGAGGAAGAAGAAGAAGAAGAAGAAGAAGCTGCTGATTCCTTTTTTGAAAGCTTCCATTTTTCTTCCATGTAA

mRNA sequence

ATGGATGATGAGGAGTTTTTTTGGGAGGAGCTGCGGCGGAGATCGGACGGCGACTTTCCGGCGGCGGAGGAAGTGTGCTTTTGGGATAAGCTTCTTAATAATGGTAATTTTGAGGAAGTGCTTCTGGTGGAACCGCTTCTGGAAAAGAGTGATTTGGAGGAAGAAGAAGAAGAAGAAGAAGAAGCTGCTGATTCCTTTTTTGAAAGCTTCCATTTTTCTTCCATGTAA

Coding sequence (CDS)

ATGGATGATGAGGAGTTTTTTTGGGAGGAGCTGCGGCGGAGATCGGACGGCGACTTTCCGGCGGCGGAGGAAGTGTGCTTTTGGGATAAGCTTCTTAATAATGGTAATTTTGAGGAAGTGCTTCTGGTGGAACCGCTTCTGGAAAAGAGTGATTTGGAGGAAGAAGAAGAAGAAGAAGAAGAAGCTGCTGATTCCTTTTTTGAAAGCTTCCATTTTTCTTCCATGTAA

Protein sequence

MDDEEFFWEELRRRSDGDFPAAEEVCFWDKLLNNGNFEEVLLVEPLLEKSDLEEEEEEEEEAADSFFESFHFSSM
Homology
BLAST of Cla97C02G045980 vs. NCBI nr
Match: KAG6570691.1 (hypothetical protein SDJN03_29606, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104.8 bits (260), Expect = 3.4e-19
Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 0

Query: 1  MDDEE-FFWEELRRRSDGDFP----AAEE-----VCFWDKLLNNGNFEEVLLVEPLLEKS 60
          MD+EE FFWEELRRRS+GD P    A EE     VCF DKLL+NG+FEEVLLVEPLLEK 
Sbjct: 1  MDEEEAFFWEELRRRSEGDLPEVAAAVEEEEEEGVCFCDKLLSNGSFEEVLLVEPLLEKK 60

Query: 61 DLEEEEEEEEEAADSFFESFHFSSM 76
          DL+EEEEEEE+  DSFFESFHFSSM
Sbjct: 61 DLDEEEEEEEQ-PDSFFESFHFSSM 84

BLAST of Cla97C02G045980 vs. NCBI nr
Match: KAE8646962.1 (hypothetical protein Csa_020732, partial [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 1.7e-18
Identity = 59/78 (75.64%), Postives = 65/78 (83.33%), Query Frame = 0

Query: 1  MDDEE-FFWEELRRR-SDGDFPAAEE--VCFWDKLLNNGNFEEVLLVEPLLEKSDLEEEE 60
          MD+EE FFWEELRRR SDGDFPA EE   CFWDKLL+NGNF EVLLVEPLLE  DLEEE+
Sbjct: 1  MDEEEGFFWEELRRRLSDGDFPAEEEGVCCFWDKLLSNGNFAEVLLVEPLLENIDLEEED 60

Query: 61 EEEEEAADSFFESFHFSS 75
          +E+    DSFFE+FHFSS
Sbjct: 61 DED----DSFFETFHFSS 74

BLAST of Cla97C02G045980 vs. ExPASy TrEMBL
Match: A0A0A0KBR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190260 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.2e-19
Identity = 59/79 (74.68%), Postives = 66/79 (83.54%), Query Frame = 0

Query: 1  MDDEE-FFWEELRRR-SDGDFPAAEE--VCFWDKLLNNGNFEEVLLVEPLLEKSDLEEEE 60
          MD+EE FFWEELRRR SDGDFPA EE   CFWDKLL+NGNF EVLLVEPLLE  DLEEE+
Sbjct: 1  MDEEEGFFWEELRRRLSDGDFPAEEEGVCCFWDKLLSNGNFAEVLLVEPLLENIDLEEED 60

Query: 61 EEEEEAADSFFESFHFSSM 76
          +E+    DSFFE+FHFSS+
Sbjct: 61 DED----DSFFETFHFSSI 75

BLAST of Cla97C02G045980 vs. TAIR 10
Match: AT1G07485.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, pedicel; EXPRESSED DURING: 4 anthesis, D bilateral stage; Has 5 Blast hits to 5 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 1.1e-04
Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = 0

Query: 33 NNGNFEEVLLVEPLLEKSDLEEEEEEEEEAAD-SFFESFHFSSM 76
          N G FEE  LVE LLE  DL+E EE+E +AA+ SFF+S HFSS+
Sbjct: 44 NAGAFEEEALVEKLLENLDLDEVEEDEHDAANASFFDSLHFSSI 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6570691.13.4e-1974.12hypothetical protein SDJN03_29606, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8646962.11.7e-1875.64hypothetical protein Csa_020732, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KBR36.2e-1974.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190260 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G07485.11.1e-0461.36unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (97103) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G045980.1Cla97C02G045980.1mRNA