ClCG01G020090.1 (mRNA) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAGAGAAAGGGGTTATGGGGTTCTTTTGGTTCTTGGAATTTTGTTGAGCATTTACTTGGTTGAGGGGAAGGGGGCGAATAGTTCTGAAAAAAGTCGAAGTCTTGATGGTATATCCAATCAATGGTCTAATTTGGATGATACCCTCTTTGGAGTTGGTGTAACCGGAAGAAATGTGACTGTTACTGGCGGCAAGGGTGGAGGAAATTCATCCGGTGAGGGCGGCGGTGGTAGTGGGGTAAGAAAGAAAGATACAAAACATCATAAAGAACAAGGAAAAAACGGAAATGGCGGTGGTGGAGGAGGTCGCGGGGGCAATGGTGGTGGCGGTGGAGGTGGAGGAGGAGGAGGAGGTACAAAGGGTGGTGGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAGTGGTGGTGGCGGAGGTGGAGGATGGGGTTTTGGCGGAGGAGGGAGTAGGGGTTTTTGTTGGATTTGGGGATGTGGTGGCGGCGGCGGTCATGGAAAAGCCTTGGCTAGAAGAGGAGGTCCTTCAAACTAAAAAGTAA ATGGGGAGAGAAAGGGGTTATGGGGTTCTTTTGGTTCTTGGAATTTTGTTGAGCATTTACTTGGTTGAGGGGAAGGGGGCGAATAGTTCTGAAAAAAGTCGAAGTCTTGATGGTATATCCAATCAATGGTCTAATTTGGATGATACCCTCTTTGGAGTTGGTGTAACCGGAAGAAATGTGACTGTTACTGGCGGCAAGGGTGGAGGAAATTCATCCGGTGAGGGCGGCGGTGGTAGTGGGGTAAGAAAGAAAGATACAAAACATCATAAAGAACAAGGAAAAAACGGAAATGGCGGTGGTGGAGGAGGTCGCGGGGGCAATGGTGGTGGCGGTGGAGGTGGAGGAGGAGGAGGAGGGGTTTTTGTTGGATTTGGGGATGTGGTGGCGGCGGCGGTCATGGAAAAGCCTTGGCTAGAAGAGGAGGTCCTTCAAACTAAAAAGTAA ATGGGGAGAGAAAGGGGTTATGGGGTTCTTTTGGTTCTTGGAATTTTGTTGAGCATTTACTTGGTTGAGGGGAAGGGGGCGAATAGTTCTGAAAAAAGTCGAAGTCTTGATGGTATATCCAATCAATGGTCTAATTTGGATGATACCCTCTTTGGAGTTGGTGTAACCGGAAGAAATGTGACTGTTACTGGCGGCAAGGGTGGAGGAAATTCATCCGGTGAGGGCGGCGGTGGTAGTGGGGTAAGAAAGAAAGATACAAAACATCATAAAGAACAAGGAAAAAACGGAAATGGCGGTGGTGGAGGAGGTCGCGGGGGCAATGGTGGTGGCGGTGGAGGTGGAGGAGGAGGAGGAGGGGTTTTTGTTGGATTTGGGGATGTGGTGGCGGCGGCGGTCATGGAAAAGCCTTGGCTAGAAGAGGAGGTCCTTCAAACTAAAAAGTAA MGRERGYGVLLVLGILLSIYLVEGKGANSSEKSRSLDGISNQWSNLDDTLFGVGVTGRNVTVTGGKGGGNSSGEGGGGSGVRKKDTKHHKEQGKNGNGGGGGGRGGNGGGGGGGGGGGGVFVGFGDVVAAAVMEKPWLEEEVLQTKK Homology
BLAST of ClCG01G020090.1 vs. NCBI nr
Match: XP_038882243.1 (glycine-rich protein DOT1-like [Benincasa hispida]) HSP 1 Score: 115.9 bits (289), Expect = 2.9e-22 Identity = 93/165 (56.36%), Postives = 107/165 (64.85%), Query Frame = 0
BLAST of ClCG01G020090.1 vs. NCBI nr
Match: KAE8647602.1 (hypothetical protein Csa_004179 [Cucumis sativus]) HSP 1 Score: 96.3 bits (238), Expect = 2.4e-16 Identity = 93/189 (49.21%), Postives = 110/189 (58.20%), Query Frame = 0
BLAST of ClCG01G020090.1 vs. NCBI nr
Match: KAG6603927.1 (hypothetical protein SDJN03_04536, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 90.5 bits (223), Expect = 1.3e-14 Identity = 82/148 (55.41%), Postives = 91/148 (61.49%), Query Frame = 0
BLAST of ClCG01G020090.1 vs. NCBI nr
Match: XP_022977280.1 (putative glycine-rich cell wall structural protein 1 [Cucurbita maxima]) HSP 1 Score: 64.7 bits (156), Expect = 7.6e-07 Identity = 73/150 (48.67%), Postives = 85/150 (56.67%), Query Frame = 0
BLAST of ClCG01G020090.1 vs. ExPASy TrEMBL
Match: A0A0A0KGL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G504700 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.3e-23 Identity = 101/190 (53.16%), Postives = 117/190 (61.58%), Query Frame = 0
BLAST of ClCG01G020090.1 vs. ExPASy TrEMBL
Match: A0A6J1ILV4 (putative glycine-rich cell wall structural protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111477646 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.7e-07 Identity = 73/150 (48.67%), Postives = 85/150 (56.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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