Homology
BLAST of Chy3G059010.1 vs. ExPASy Swiss-Prot
Match:
Q9CAE4 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP31 PE=2 SV=1)
HSP 1 Score: 274.6 bits (701), Expect = 1.1e-72
Identity = 158/269 (58.74%), Postives = 186/269 (69.14%), Query Frame = 0
Query: 6 KKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGGSGGLV 65
KK SD +ED+TFYYRY S + PS P S S S+ GGGSGGL
Sbjct: 2 KKRKIHHSDDEEDDTFYYRYSSVAAPPPSNP--------KHQPSSSAKSSAPGGGSGGLA 61
Query: 66 PSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVK 125
PSKSTLYVSN D+SLTNSD+HTLFSTFGK+ARVTVLKDR TR+SRGVAFV ++S++DA K
Sbjct: 62 PSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAK 121
Query: 126 AAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQL 185
AA+ M KILNGR L +IA DNGRA+EFI+KRVYKDKSRCYECG +GHLSYECPKNQL
Sbjct: 122 AARSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGD-EGHLSYECPKNQL 181
Query: 186 GPRERPEPKRV---RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRILT 245
GPRERP P + R+ G E W + E FE++NWASVVD +A +R+
Sbjct: 182 GPRERPPPPKKRGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGERLRK 241
Query: 246 GGENIVE----KKKEKKASYFSDESDEDD 262
E K+KEKK SYFSDESD++D
Sbjct: 242 REAEEEEERRMKRKEKKVSYFSDESDDED 261
BLAST of Chy3G059010.1 vs. ExPASy Swiss-Prot
Match:
Q499V6 (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Zcrb1 PE=2 SV=1)
HSP 1 Score: 173.3 bits (438), Expect = 3.6e-42
Identity = 101/217 (46.54%), Postives = 138/217 (63.59%), Query Frame = 0
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGL PSKST+YVSN +SLTN+DL+ +FS +GK+ +VT++KD+ TRKS+GVAF+ F+ +
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
D A+ + ++ K L GRV+KA+IA DNGRAAEFIR+R Y DKS+CYECG GHLSY C
Sbjct: 62 DSALNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGE-SGHLSYAC 121
Query: 181 PKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVD 240
PKN LG RE P+ K + ++ V EE +V E +D A + +
Sbjct: 122 PKNMLGEREPPKKKEKKKKKKVPEPEEEIEEVEVSEEEGEDPALDSLSQAIAFQQAKIEE 181
Query: 241 GDADQRILTGGENIVEKKKE---KKASYFSDESDEDD 262
R TGG + + + KK++YFSDE + D
Sbjct: 182 EQNKWRPSTGGPSTSDDSRRPRIKKSAYFSDEEELSD 217
BLAST of Chy3G059010.1 vs. ExPASy Swiss-Prot
Match:
Q8TBF4 (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Homo sapiens OX=9606 GN=ZCRB1 PE=1 SV=2)
HSP 1 Score: 171.8 bits (434), Expect = 1.0e-41
Identity = 101/220 (45.91%), Postives = 136/220 (61.82%), Query Frame = 0
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGL PSKST+YVSN +SLTN+DL+ +FS +GK+ +VT++KD+ TRKS+GVAF+ F+ +
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
D A + ++ K L GRV+KA+IA DNGRAAEFIR+R Y DKS+CYECG GHLSY C
Sbjct: 62 DSAQNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGE-SGHLSYAC 121
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGEN 240
PKN LG RE P+ K ++ EE+ + E ED+ +D Q I
Sbjct: 122 PKNMLGEREPPKKKEKKKKKKAPEPEEE--IEEVEESEDEGEDPALD-SLSQAIAFQQAK 181
Query: 241 IVEKKKE-------------------KKASYFSDESDEDD 262
I E++K+ KK++YFSDE + D
Sbjct: 182 IEEEQKKWKPSSGVPSTSDDSRRPRIKKSTYFSDEEELSD 217
BLAST of Chy3G059010.1 vs. ExPASy Swiss-Prot
Match:
Q9CZ96 (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Mus musculus OX=10090 GN=Zcrb1 PE=1 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 2.3e-41
Identity = 99/217 (45.62%), Postives = 138/217 (63.59%), Query Frame = 0
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGL PSKST+YVSN +SLTN+DL+ +FS +GK+ +VT++KD+ TRKS+GVAF+ F+ +
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
D A+ + ++ K L GRV+KA+IA DNGRAAEFIR+R Y DKS+CYECG GHLSY C
Sbjct: 62 DSALNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGE-SGHLSYAC 121
Query: 181 PKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVD 240
PKN LG RE P+ K + ++ + EE +V E +D A + +
Sbjct: 122 PKNMLGEREPPKKKEKKKKRKLPEPEEEIEEVEVSEEEGEDPALDSLSQAIAFQQAKIEE 181
Query: 241 GDADQRILTGGENIVEKKKE---KKASYFSDESDEDD 262
+ R GG + + + KK++YFSDE + D
Sbjct: 182 EQSKWRPNPGGPSTSDDSRRPRIKKSAYFSDEEELSD 217
BLAST of Chy3G059010.1 vs. ExPASy Swiss-Prot
Match:
Q5SP50 (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Danio rerio OX=7955 GN=zcrb1 PE=2 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 6.7e-41
Identity = 101/218 (46.33%), Postives = 132/218 (60.55%), Query Frame = 0
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGL PSKST+YVSN +SLTNSD+H L S +GK+ +VT++KD+ TR S+GVAFV F+ +
Sbjct: 2 SGGLAPSKSTVYVSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDR 61
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
+ A ++ ++ K L GR++KA+IA DNGRAAEFIRKR Y DKS+CYECG +GHLSY C
Sbjct: 62 ESAYNCSRSLNNKQLFGRMVKASIAIDNGRAAEFIRKRNYTDKSKCYECGE-EGHLSYAC 121
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGE- 240
PKN LG RE P K ++ + EE D E ED S+ A Q+ E
Sbjct: 122 PKNLLGEREPPPKKEKKKKKKVQQPEEVEPEDSEEEGEDPALDSLSQAIAFQQARIEEEE 181
Query: 241 ----------------NIVEKKKEKKASYFSDESDEDD 262
K + KK++YFSDE + D
Sbjct: 182 KRRKQAAEDASQASTSEDTHKPRIKKSAYFSDEEELSD 218
BLAST of Chy3G059010.1 vs. ExPASy TrEMBL
Match:
A0A5A7SYZ1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00210 PE=4 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 4.7e-130
Identity = 247/261 (94.64%), Postives = 250/261 (95.79%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGG 60
MA GKKTN+PTSDSDEDETFYYRYPSA SSAP LPSSSQS FSSQSHSH SSTKSGGG
Sbjct: 1 MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSH--SSTKSGGG 60
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGLVPSKST+YVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ
Sbjct: 61 SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC
Sbjct: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGEN 240
PKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQR+LTGGEN
Sbjct: 181 PKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGEN 240
Query: 241 IVEKKKEKKASYFSDESDEDD 262
IVEKKK KKASYFSDES EDD
Sbjct: 241 IVEKKKAKKASYFSDESGEDD 259
BLAST of Chy3G059010.1 vs. ExPASy TrEMBL
Match:
A0A1S3C324 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucumis melo OX=3656 GN=LOC103496454 PE=4 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 4.7e-130
Identity = 247/261 (94.64%), Postives = 250/261 (95.79%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGG 60
MA GKKTN+PTSDSDEDETFYYRYPSA SSAP LPSSSQS FSSQSHSH SSTKSGGG
Sbjct: 1 MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSH--SSTKSGGG 60
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGLVPSKST+YVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ
Sbjct: 61 SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC
Sbjct: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGEN 240
PKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQR+LTGGEN
Sbjct: 181 PKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGEN 240
Query: 241 IVEKKKEKKASYFSDESDEDD 262
IVEKKK KKASYFSDES EDD
Sbjct: 241 IVEKKKAKKASYFSDESGEDD 259
BLAST of Chy3G059010.1 vs. ExPASy TrEMBL
Match:
A0A6J1JX53 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111489639 PE=4 SV=1)
HSP 1 Score: 444.1 bits (1141), Expect = 4.0e-121
Identity = 229/261 (87.74%), Postives = 238/261 (91.19%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGG 60
M+ GK+ +P SDSD+DETFYYRYPSA SSAP PSSSQS FSSQSHSH SSTKSGGG
Sbjct: 1 MSRKGKRAKNPNSDSDDDETFYYRYPSATSSAPPPPSSSQSHFSSQSHSH--SSTKSGGG 60
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGLVPSKST+YVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRG AFVQFISQ
Sbjct: 61 SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGAAFVQFISQ 120
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
DDAVK KQMHGKILNGR LK AIA DNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC
Sbjct: 121 DDAVKTVKQMHGKILNGRALKVAIANDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGEN 240
PKNQLGPRERPEPKRVR+GGVGARHEEDWGSD GEGFEDD WASVVDGDADQR+LT EN
Sbjct: 181 PKNQLGPRERPEPKRVRKGGVGARHEEDWGSDDGEGFEDDKWASVVDGDADQRLLTSSEN 240
Query: 241 IVEKKKEKKASYFSDESDEDD 262
+VEKKK KKASYFSDES ED+
Sbjct: 241 VVEKKKAKKASYFSDESGEDE 259
BLAST of Chy3G059010.1 vs. ExPASy TrEMBL
Match:
A0A6J1FIA0 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111445663 PE=4 SV=1)
HSP 1 Score: 443.4 bits (1139), Expect = 6.8e-121
Identity = 229/261 (87.74%), Postives = 238/261 (91.19%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGG 60
M+ K+ +P SDSD+DETFYYRYPSA SSAP PSSSQS FSSQSHSH SSTKSGGG
Sbjct: 1 MSRKEKRAKNPNSDSDDDETFYYRYPSATSSAPPPPSSSQSHFSSQSHSH--SSTKSGGG 60
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGLVPSKST+YVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRG AFVQFISQ
Sbjct: 61 SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGAAFVQFISQ 120
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
DDAVK KQMHGKILNGR LK AIA DNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC
Sbjct: 121 DDAVKTVKQMHGKILNGRALKVAIANDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGEN 240
PKNQLGPRERPEPKRVR+GGVGARHEEDWGSD GEGFEDDNWASVVDGDADQR+LT EN
Sbjct: 181 PKNQLGPRERPEPKRVRKGGVGARHEEDWGSDDGEGFEDDNWASVVDGDADQRLLTSSEN 240
Query: 241 IVEKKKEKKASYFSDESDEDD 262
+VEKKK KKASYFSDES ED+
Sbjct: 241 VVEKKKAKKASYFSDESGEDE 259
BLAST of Chy3G059010.1 vs. ExPASy TrEMBL
Match:
A0A6J1BY38 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Momordica charantia OX=3673 GN=LOC111006640 PE=4 SV=1)
HSP 1 Score: 433.7 bits (1114), Expect = 5.4e-118
Identity = 227/261 (86.97%), Postives = 241/261 (92.34%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGG 60
MA GK+TN P SDSD+DETFYYRYPSA SSAP PSSSQS S +HS+SS KSGGG
Sbjct: 1 MARKGKRTN-PNSDSDDDETFYYRYPSAASSAPP-PSSSQS-----SQAHSHSSIKSGGG 60
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGLVPSKST+YVSN DYSLTNSDLHTLFSTFGKIARVTVLKDRQTR+SRGVAF+QFISQ
Sbjct: 61 SGGLVPSKSTVYVSNVDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRRSRGVAFIQFISQ 120
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
DDAVKA K+M+GKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC
Sbjct: 121 DDAVKACKEMNGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGEN 240
P+NQLGPRERPEPKR RRGGVGARHEEDWGSD GEGFEDDNWASVVDGDADQR+LTGGEN
Sbjct: 181 PRNQLGPRERPEPKRGRRGGVGARHEEDWGSDGGEGFEDDNWASVVDGDADQRLLTGGEN 240
Query: 241 IVEKKKEKKASYFSDESDEDD 262
+ E+KK KKASYFSDESDED+
Sbjct: 241 VAERKKGKKASYFSDESDEDE 254
BLAST of Chy3G059010.1 vs. NCBI nr
Match:
XP_031739837.1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >XP_031745445.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >XP_031745456.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >XP_031745622.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >XP_031745721.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >KAE8637133.1 hypothetical protein CSA_021509 [Cucumis sativus] >KAE8637376.1 hypothetical protein CSA_004469 [Cucumis sativus] >KAE8637383.1 hypothetical protein CSA_004476 [Cucumis sativus] >KAE8637476.1 hypothetical protein CSA_018827 [Cucumis sativus] >KAE8637589.1 hypothetical protein CSA_021598 [Cucumis sativus])
HSP 1 Score: 501 bits (1289), Expect = 2.36e-178
Identity = 254/261 (97.32%), Postives = 257/261 (98.47%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGG 60
MAP GKKTNSPTSDSDEDETFYYRYPSAPSS PSLPSSSQS FSSQSHSHS+SSTKSGGG
Sbjct: 1 MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGG 60
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGLVPSKSTLYVSNFDYSLTNSDLHTLFS FGKIARVTVLKDRQTRKSRGVAFVQFISQ
Sbjct: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGA+DGHLSYEC
Sbjct: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYEC 180
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGEN 240
PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQR+LTGGEN
Sbjct: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGEN 240
Query: 241 IVEKKKEKKASYFSDESDEDD 261
IVEKKKEKKASYFSDESDEDD
Sbjct: 241 IVEKKKEKKASYFSDESDEDD 261
BLAST of Chy3G059010.1 vs. NCBI nr
Match:
XP_031745992.1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >KAE8637587.1 hypothetical protein CSA_004586 [Cucumis sativus])
HSP 1 Score: 492 bits (1266), Expect = 9.42e-175
Identity = 253/267 (94.76%), Postives = 256/267 (95.88%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSH------SHSYSS 60
MAP GKKTNSPTSDSDEDETFYYRYPSAPSS PSLPSSSQS FSSQSH SHS+SS
Sbjct: 1 MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
Query: 61 TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAF 120
TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLF FGKIARVTVLKDRQTRKSRGVAF
Sbjct: 61 TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAF 120
Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDG 180
VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGA+DG
Sbjct: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRI 240
HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQR+
Sbjct: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 261
LTGGENIVEKKKEKKASYFSDESDEDD
Sbjct: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
BLAST of Chy3G059010.1 vs. NCBI nr
Match:
XP_031745314.1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >KAE8637394.1 hypothetical protein CSA_004754 [Cucumis sativus])
HSP 1 Score: 491 bits (1264), Expect = 1.90e-174
Identity = 253/267 (94.76%), Postives = 256/267 (95.88%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSH------SHSYSS 60
MAP KKTNSPTSDSDEDETFYYRYPSAPSS PSLPSSSQS FSSQSH SHS+SS
Sbjct: 1 MAPKEKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSS 60
Query: 61 TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAF 120
TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFS FGKIARVTVLKDRQTRKSRGVAF
Sbjct: 61 TKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAF 120
Query: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDG 180
VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGA+DG
Sbjct: 121 VQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDG 180
Query: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRI 240
HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQR+
Sbjct: 181 HLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRL 240
Query: 241 LTGGENIVEKKKEKKASYFSDESDEDD 261
LTGGENIVEKKKEKKASYFSDESDEDD
Sbjct: 241 LTGGENIVEKKKEKKASYFSDESDEDD 267
BLAST of Chy3G059010.1 vs. NCBI nr
Match:
XP_008456528.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Cucumis melo] >KAA0036504.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Cucumis melo var. makuwa] >TYJ99977.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Cucumis melo var. makuwa])
HSP 1 Score: 478 bits (1229), Expect = 3.07e-169
Identity = 247/261 (94.64%), Postives = 250/261 (95.79%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGG 60
MA GKKTN+PTSDSDEDETFYYRYPSA SSAP LPSSSQS FSSQSHSHS STKSGGG
Sbjct: 1 MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHS--STKSGGG 60
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGLVPSKST+YVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ
Sbjct: 61 SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC
Sbjct: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGEN 240
PKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQR+LTGGEN
Sbjct: 181 PKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGEN 240
Query: 241 IVEKKKEKKASYFSDESDEDD 261
IVEKKK KKASYFSDES EDD
Sbjct: 241 IVEKKKAKKASYFSDESGEDD 259
BLAST of Chy3G059010.1 vs. NCBI nr
Match:
XP_038883985.1 (U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Benincasa hispida])
HSP 1 Score: 465 bits (1197), Expect = 2.31e-164
Identity = 239/261 (91.57%), Postives = 248/261 (95.02%), Query Frame = 0
Query: 1 MAPMGKKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGG 60
MA GK+TN+P SDS++DETFYYRYPSA SSAP PS+SQS FSSQSHSHS STK GG
Sbjct: 1 MARKGKRTNNPNSDSEDDETFYYRYPSAASSAPPPPSASQSHFSSQSHSHS--STKFSGG 60
Query: 61 SGGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
SGGLVPSKST+YVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ
Sbjct: 61 SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 120
Query: 121 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
DDAVKAAKQM+GKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC
Sbjct: 121 DDAVKAAKQMNGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 180
Query: 181 PKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRILTGGEN 240
PKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQR+LTGGEN
Sbjct: 181 PKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGEN 240
Query: 241 IVEKKKEKKASYFSDESDEDD 261
+VEKKK KKASYFSDESDEDD
Sbjct: 241 VVEKKKAKKASYFSDESDEDD 259
BLAST of Chy3G059010.1 vs. TAIR 10
Match:
AT3G10400.1 (RNA recognition motif and CCHC-type zinc finger domains containing protein )
HSP 1 Score: 274.6 bits (701), Expect = 8.1e-74
Identity = 158/269 (58.74%), Postives = 186/269 (69.14%), Query Frame = 0
Query: 6 KKTNSPTSDSDEDETFYYRYPSAPSSAPSLPSSSQSLFSSQSHSHSYSSTKSGGGSGGLV 65
KK SD +ED+TFYYRY S + PS P S S S+ GGGSGGL
Sbjct: 2 KKRKIHHSDDEEDDTFYYRYSSVAAPPPSNP--------KHQPSSSAKSSAPGGGSGGLA 61
Query: 66 PSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVK 125
PSKSTLYVSN D+SLTNSD+HTLFSTFGK+ARVTVLKDR TR+SRGVAFV ++S++DA K
Sbjct: 62 PSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAK 121
Query: 126 AAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQL 185
AA+ M KILNGR L +IA DNGRA+EFI+KRVYKDKSRCYECG +GHLSYECPKNQL
Sbjct: 122 AARSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGD-EGHLSYECPKNQL 181
Query: 186 GPRERPEPKRV---RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRILT 245
GPRERP P + R+ G E W + E FE++NWASVVD +A +R+
Sbjct: 182 GPRERPPPPKKRGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGERLRK 241
Query: 246 GGENIVE----KKKEKKASYFSDESDEDD 262
E K+KEKK SYFSDESD++D
Sbjct: 242 REAEEEEERRMKRKEKKVSYFSDESDDED 261
BLAST of Chy3G059010.1 vs. TAIR 10
Match:
AT3G23830.1 (glycine-rich RNA-binding protein 4 )
HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query: 62 GGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQD 121
G L S L+V + +S L F++FG++ TV+ DR+T +SRG FV F +D
Sbjct: 28 GSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCED 87
Query: 122 DAVKAAKQMHGKILNGRVLKAAIATDNGRA 152
A A K+M GK LNGR ++ +AT+ A
Sbjct: 88 SANNAIKEMDGKELNGRQIRVNLATERSSA 117
BLAST of Chy3G059010.1 vs. TAIR 10
Match:
AT3G23830.2 (glycine-rich RNA-binding protein 4 )
HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query: 62 GGLVPSKSTLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQD 121
G L S L+V + +S L F++FG++ TV+ DR+T +SRG FV F +D
Sbjct: 28 GSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCED 87
Query: 122 DAVKAAKQMHGKILNGRVLKAAIATDNGRA 152
A A K+M GK LNGR ++ +AT+ A
Sbjct: 88 SANNAIKEMDGKELNGRQIRVNLATERSSA 117
BLAST of Chy3G059010.1 vs. TAIR 10
Match:
AT3G46020.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 62.8 bits (151), Expect = 4.8e-10
Identity = 33/94 (35.11%), Postives = 56/94 (59.57%), Query Frame = 0
Query: 71 LYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQM 130
L+VS T+ L LFS FG+I +++D +T++ +G F+ F S+DDA KA K +
Sbjct: 9 LFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKSL 68
Query: 131 HGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKS 165
GKI++GR++ +A + AE +R + +K+
Sbjct: 69 DGKIVDGRLIFVEVA----KNAEEVRAGINSNKA 98
BLAST of Chy3G059010.1 vs. TAIR 10
Match:
AT3G08000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 59.3 bits (142), Expect = 5.3e-09
Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 0
Query: 69 STLYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAK 128
S L++ +S+ L FS+FG++A V + D+ + +SRG FV F + DA+ A
Sbjct: 41 SKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKD 100
Query: 129 QMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDK 164
M GK L GR L+ + A + R + R+ K K
Sbjct: 101 AMDGKGLLGRPLRISFALERVRGGPVVVPRLGKSK 135
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9CAE4 | 1.1e-72 | 58.74 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Arabidopsis thaliana O... | [more] |
Q499V6 | 3.6e-42 | 46.54 | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Rattus norve... | [more] |
Q8TBF4 | 1.0e-41 | 45.91 | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Homo sapiens... | [more] |
Q9CZ96 | 2.3e-41 | 45.62 | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Mus musculus... | [more] |
Q5SP50 | 6.7e-41 | 46.33 | Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Danio rerio ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7SYZ1 | 4.7e-130 | 94.64 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucumis melo var. maku... | [more] |
A0A1S3C324 | 4.7e-130 | 94.64 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucumis melo OX=3656 G... | [more] |
A0A6J1JX53 | 4.0e-121 | 87.74 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucurbita maxima OX=36... | [more] |
A0A6J1FIA0 | 6.8e-121 | 87.74 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Cucurbita moschata OX=... | [more] |
A0A6J1BY38 | 5.4e-118 | 86.97 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Momordica charantia OX... | [more] |
Match Name | E-value | Identity | Description | |
XP_031739837.1 | 2.36e-178 | 97.32 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >X... | [more] |
XP_031745992.1 | 9.42e-175 | 94.76 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >K... | [more] |
XP_031745314.1 | 1.90e-174 | 94.76 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus] >K... | [more] |
XP_008456528.1 | 3.07e-169 | 94.64 | PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Cucumis melo]... | [more] |
XP_038883985.1 | 2.31e-164 | 91.57 | U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
AT3G10400.1 | 8.1e-74 | 58.74 | RNA recognition motif and CCHC-type zinc finger domains containing protein | [more] |
AT3G23830.1 | 1.1e-11 | 38.89 | glycine-rich RNA-binding protein 4 | [more] |
AT3G23830.2 | 1.1e-11 | 38.89 | glycine-rich RNA-binding protein 4 | [more] |
AT3G46020.1 | 4.8e-10 | 35.11 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT3G08000.1 | 5.3e-09 | 33.68 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |