Chy1G011600.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCTACCCTCGAGAAGGATGTGGCGGAGCATAAAGAGGAGAGTGACAACAGCAAAAGTGATCGTCATTGGAAAAGACCTTTGAAGAAAGCGAAGGTGTCAGGTGATGACTCTGGCGAAAGGGGCTCGAGTGCTATGGGAATTCTTGATGTCCCACCACTAGTTTGCATATTTTCCTTCTTTAATAATTTTCTTTAATTGTTAATCTTCTTCATGAATGATTTATCCATTGCTTATTTTTGCAGTCACCTTTGGATAATCATCTTGAAGGACTCATAGATGTAGACAATGATGAATCACTAACTAGTCCTCATATGACTGATACGACTATTGAGGAAGTTGGTATTTCGAAGACACCAGCTGCAAAACCAATCGAACTATCTTTACGTCCCTCTGCTCTTCTCGAGGAGATTCGTCGAGGCAAGATGAAAGTGGGCGGCCAAGACATCGAGAATCCTCCCTCTAGAGGAGGTGCCTGTCCTACAGTGCGAGTCCTACAGTGCCTTCAACGAAGGCTACATCCATGCATGCTCCTCTCAAGATTTCCGAGCCGCCTCTAGGCACCTCTATGAAACAGGCAGCAGAACACCCTGAGCCTTCTCAGTGGGTTGTTGAAAATGTAGTTTCAAATTTCTTTCAGAAAACAGCCATGTGTATGTGGAGGGACATTCAAGACAAGATCATACGCACCCTTTTTGAATATATCTCAAGACTTAGGCCAGAAATAGCAATAGTTCTCTCAGGAATTGCGAAGATTCATGCAGACGACTTGACTCCTCTTGAAGAATACTTGAATAGTTAT ATGGCTCCTACCCTCGAGAAGGATGTGGCGGAGCATAAAGAGGAGAGTGACAACAGCAAAAGTGATCGTCATTGGAAAAGACCTTTGAAGAAAGCGAAGACACCAGCTGCAAAACCAATCGAACTATCTTTACGTCCCTCTGCTCTTCTCGAGGAGATTCGTCGAGGCAAGATGAAAGTGGGCGGCCAAGACATCGAGAATCCTCCCTCTAGAGGAGGTGCCTGTCCTACAGTGCGAGTCCTACAGTGCCTTCAACGAAGGCTACATCCATGCATGCTCCTCTCAAGATTTCCGAGCCGCCTCTAGGCACCTCTATGAAACAGGCAGCAGAACACCCTGAGCCTTCTCAACTTAGGCCAGAAATAGCAATAGTTCTCTCAGGAATTGCGAAGATTCATGCAGACGACTTGACTCCTCTTGAAGAATACTTGAATAGTTAT ATGGCTCCTACCCTCGAGAAGGATGTGGCGGAGCATAAAGAGGAGAGTGACAACAGCAAAAGTGATCGTCATTGGAAAAGACCTTTGAAGAAAGCGAAGACACCAGCTGCAAAACCAATCGAACTATCTTTACGTCCCTCTGCTCTTCTCGAGGAGATTCGTCGAGGCAAGATGAAAGTGGGCGGCCAAGACATCGAGAATCCTCCCTCTAGAGGAGGTGCCTGTCCTACAGTGCGAGTCCTACAGTGCCTTCAACGAAGGCTACATCCATGCATGCTCCTCTCAAGATTTCCGAGCCGCCTCTAGGCACCTCTATGAAACAGGCAGCAGAACACCCTGAGCCTTCTCAACTTAGGCCAGAAATAGCAATAGTTCTCTCAGGAATTGCGAAGATTCATGCAGACGACTTGACTCCTCTTGAAGAATACTTGAATAGTTAT MAPTLEKDVAEHKEESDNSKSDRHWKRPLKKAKTPAAKPIELSLRPSALLEEIRRGKMKVGGQDIENPPSRGGACPTVRVLQCLQRRLHPCMLLSRFPSRL*APL*NRQQNTLSLLNLGQK*Q*FSQELRRFMQTT*LLLKNT*IVX Homology
BLAST of Chy1G011600.1 vs. ExPASy TrEMBL
Match: A0A0A0KQU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G264300 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.4e-30 Identity = 72/98 (73.47%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of Chy1G011600.1 vs. ExPASy TrEMBL
Match: A0A5D3E1Q2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3607G00180 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 5.1e-17 Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Chy1G011600.1 vs. ExPASy TrEMBL
Match: A0A5D3C3D7 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001360 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 6.7e-17 Identity = 56/114 (49.12%), Postives = 64/114 (56.14%), Query Frame = 0
BLAST of Chy1G011600.1 vs. ExPASy TrEMBL
Match: A0A5A7SQC9 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00140 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 59/134 (44.03%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of Chy1G011600.1 vs. ExPASy TrEMBL
Match: A0A5A7UVX0 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00390 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 3.3e-16 Identity = 59/134 (44.03%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of Chy1G011600.1 vs. NCBI nr
Match: KAE8648075.1 (hypothetical protein Csa_018860, partial [Cucumis sativus]) HSP 1 Score: 141 bits (356), Expect = 4.72e-40 Identity = 72/98 (73.47%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of Chy1G011600.1 vs. NCBI nr
Match: TYK29708.1 (hypothetical protein E5676_scaffold3607G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 3.89e-21 Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Chy1G011600.1 vs. NCBI nr
Match: KAA0050984.1 (hypothetical protein E6C27_scaffold3608G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 2.42e-20 Identity = 51/98 (52.04%), Postives = 62/98 (63.27%), Query Frame = 0
BLAST of Chy1G011600.1 vs. NCBI nr
Match: TYK06433.1 (hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]) HSP 1 Score: 97.1 bits (240), Expect = 4.13e-20 Identity = 56/114 (49.12%), Postives = 64/114 (56.14%), Query Frame = 0
BLAST of Chy1G011600.1 vs. NCBI nr
Match: KAA0031751.1 (hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 9.82e-20 Identity = 59/134 (44.03%), Postives = 67/134 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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