CcUC08G160950.1 (mRNA) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGTGGGGACAGATTCCATCTCAGCCCTCCAACTATGTCAGTATTCTTCATCTTCGAGAACGGTGGCTCAAAGAAAATGAGCGAAACCAGAAACTTGACCAACAAGAACAGCAACAGAACGTTCTGCAGACGGAACCTGAGGAGAAGGATGATCAGAAGCCGGTGGTTCAAAAGCCTCGAATCAATGCTTCTTCTTGGAGCAGAAATGGGAGTAGAAATGAGAGTGGGAAGTTCCATAGGCATTATCGAGCTGTACCGGCGATTAAACCGCGCAATGTGAACGAGCCGTGCAAGAAGACTGAAGATGAAGGCGAGCCTCAGCTGGCTGTTTCTCAAATCGAGCGAGATGAGAAGAAGGGAAAGAAGTCTAAAAGGGTCGCAAGAAGAACCCTAGACTACAGAAGGAAGTGA ATGGAAGGGTGGGGACAGATTCCATCTCAGCCCTCCAACTATGTCAGTATTCTTCATCTTCGAGAACGGTGGCTCAAAGAAAATGAGCGAAACCAGAAACTTGACCAACAAGAACAGCAACAGAACGTTCTGCAGACGGAACCTGAGGAGAAGGATGATCAGAAGCCGGTGGTTCAAAAGCCTCGAATCAATGCTTCTTCTTGGAGCAGAAATGGGAGTAGAAATGAGAGTGGGAAGTTCCATAGGCATTATCGAGCTGTACCGGCGATTAAACCGCGCAATGTGAACGAGCCGTGCAAGAAGACTGAAGATGAAGGCGAGCCTCAGCTGGCTGTTTCTCAAATCGAGCGAGATGAGAAGAAGGGAAAGAAGTCTAAAAGGGTCGCAAGAAGAACCCTAGACTACAGAAGGAAGTGA ATGGAAGGGTGGGGACAGATTCCATCTCAGCCCTCCAACTATGTCAGTATTCTTCATCTTCGAGAACGGTGGCTCAAAGAAAATGAGCGAAACCAGAAACTTGACCAACAAGAACAGCAACAGAACGTTCTGCAGACGGAACCTGAGGAGAAGGATGATCAGAAGCCGGTGGTTCAAAAGCCTCGAATCAATGCTTCTTCTTGGAGCAGAAATGGGAGTAGAAATGAGAGTGGGAAGTTCCATAGGCATTATCGAGCTGTACCGGCGATTAAACCGCGCAATGTGAACGAGCCGTGCAAGAAGACTGAAGATGAAGGCGAGCCTCAGCTGGCTGTTTCTCAAATCGAGCGAGATGAGAAGAAGGGAAAGAAGTCTAAAAGGGTCGCAAGAAGAACCCTAGACTACAGAAGGAAGTGA MEGWGQIPSQPSNYVSILHLRERWLKENERNQKLDQQEQQQNVLQTEPEEKDDQKPVVQKPRINASSWSRNGSRNESGKFHRHYRAVPAIKPRNVNEPCKKTEDEGEPQLAVSQIERDEKKGKKSKRVARRTLDYRRK Homology
BLAST of CcUC08G160950.1 vs. NCBI nr
Match: XP_038884414.1 (gelsolin-related protein of 125 kDa-like [Benincasa hispida] >XP_038884415.1 gelsolin-related protein of 125 kDa-like [Benincasa hispida]) HSP 1 Score: 191.8 bits (486), Expect = 3.9e-45 Identity = 106/138 (76.81%), Postives = 113/138 (81.88%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. NCBI nr
Match: KAA0060961.1 (glutamic acid-rich protein [Cucumis melo var. makuwa]) HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31 Identity = 86/140 (61.43%), Postives = 101/140 (72.14%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. NCBI nr
Match: XP_008444535.1 (PREDICTED: glutamic acid-rich protein [Cucumis melo] >XP_008444536.1 PREDICTED: glutamic acid-rich protein [Cucumis melo]) HSP 1 Score: 145.6 bits (366), Expect = 3.2e-31 Identity = 88/143 (61.54%), Postives = 103/143 (72.03%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. NCBI nr
Match: XP_011649562.1 (uncharacterized protein DDB_G0286299 [Cucumis sativus] >XP_011649563.1 uncharacterized protein DDB_G0286299 [Cucumis sativus] >KGN62437.1 hypothetical protein Csa_018605 [Cucumis sativus]) HSP 1 Score: 137.1 bits (344), Expect = 1.1e-28 Identity = 84/140 (60.00%), Postives = 101/140 (72.14%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. NCBI nr
Match: XP_022131328.1 (myb-like protein X [Momordica charantia]) HSP 1 Score: 112.5 bits (280), Expect = 3.0e-21 Identity = 75/140 (53.57%), Postives = 91/140 (65.00%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. ExPASy TrEMBL
Match: A0A5A7V598 (Glutamic acid-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00950 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 9.1e-32 Identity = 86/140 (61.43%), Postives = 101/140 (72.14%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. ExPASy TrEMBL
Match: A0A1S3BBD2 (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103487826 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.5e-31 Identity = 88/143 (61.54%), Postives = 103/143 (72.03%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. ExPASy TrEMBL
Match: A0A0A0LNR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354630 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 5.5e-29 Identity = 84/140 (60.00%), Postives = 101/140 (72.14%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. ExPASy TrEMBL
Match: A0A6J1BT17 (myb-like protein X OS=Momordica charantia OX=3673 GN=LOC111004586 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.5e-21 Identity = 75/140 (53.57%), Postives = 91/140 (65.00%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. ExPASy TrEMBL
Match: A0A6J1HDF8 (uncharacterized protein LOC111462917 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462917 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 9.7e-18 Identity = 71/132 (53.79%), Postives = 84/132 (63.64%), Query Frame = 0
BLAST of CcUC08G160950.1 vs. TAIR 10
Match: AT2G30960.1 (unknown protein; Has 4906 Blast hits to 2903 proteins in 334 species: Archae - 5; Bacteria - 381; Metazoa - 1639; Fungi - 509; Plants - 244; Viruses - 5; Other Eukaryotes - 2123 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05 Identity = 29/74 (39.19%), Postives = 47/74 (63.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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