CaUC09G164300.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATTAACTATTTACAAATTGCAATCCATAGCGCAAATCCTTCTTCTTCCTCCTCCTCTTCATCTCAATCTTCTCATTTTCCACAGCACATAGATGGAATCTCACCACACACATTCAAATCCCCTCTCAAACCTTTCAACCAACTTCGTTTCGCTCCACTTTCAAGCAGTAGCCCAGCCACCTCTTCCTGTCCGGCCTCCACGGCGCACCGCAGTGGCGTGTACCCTACGTTGTCCACGGCGTCCGCCTCCGCTCCGTGCTCCAGCAGCACCTTCACGCATTCCACTCTGCCTTTGAACGCCGCCCTGTGCAGAGCCGTCCACCCGTTCTGGTCTTTTCCGTTCACTTTCGCTCCCGCCGCTACGCAACTTCTCAGACCTCGAACGTCGCCGGCTCTAGCCGTTCTGTGCAATGCATCGTCTAATCTCAACGAATCGAACAGATCTGTGTGTCCCTTCTCCGACGCGACTGCAAACGCCGTTTTTCCATCGGAATTCACCGCGTATTTCACATTCGAGCAGTTTAGAAGATACTCCACGGCTTCGAGATGTCCTTCCGCTGCCGCGGAATGTAGCGGAGTCCATTTTCTTCGATCCACCGCCTCCGGATCTCCGCCGATCGAAGCGAGAAAACGTATTGCCCCGACGTGA ATGGCCATTAACTATTTACAAATTGCAATCCATAGCGCAAATCCTTCTTCTTCCTCCTCCTCTTCATCTCAATCTTCTCATTTTCCACAGCACATAGATGGAATCTCACCACACACATTCAAATCCCCTCTCAAACCTTTCAACCAACTTCGTTTCGCTCCACTTTCAAGCAGTAGCCCAGCCACCTCTTCCTGTCCGGCCTCCACGGCGCACCGCAGTGGCGTGTACCCTACGTTGTCCACGGCGTCCGCCTCCGCTCCGTGCTCCAGCAGCACCTTCACGCATTCCACTCTGCCTTTGAACGCCGCCCTGTGCAGAGCCGTCCACCCGTTCTGGTCTTTTCCGTTCACTTTCGCTCCCGCCGCTACGCAACTTCTCAGACCTCGAACGTCGCCGGCTCTAGCCGTTCTGTGCAATGCATCGTCTAATCTCAACGAATCGAACAGATCTGTGTGTCCCTTCTCCGACGCGACTGCAAACGCCGTTTTTCCATCGGAATTCACCGCGTATTTCACATTCGAGCAGTTTAGAAGATACTCCACGGCTTCGAGATGTCCTTCCGCTGCCGCGGAATGTAGCGGAGTCCATTTTCTTCGATCCACCGCCTCCGGATCTCCGCCGATCGAAGCGAGAAAACGTATTGCCCCGACGTGA ATGGCCATTAACTATTTACAAATTGCAATCCATAGCGCAAATCCTTCTTCTTCCTCCTCCTCTTCATCTCAATCTTCTCATTTTCCACAGCACATAGATGGAATCTCACCACACACATTCAAATCCCCTCTCAAACCTTTCAACCAACTTCGTTTCGCTCCACTTTCAAGCAGTAGCCCAGCCACCTCTTCCTGTCCGGCCTCCACGGCGCACCGCAGTGGCGTGTACCCTACGTTGTCCACGGCGTCCGCCTCCGCTCCGTGCTCCAGCAGCACCTTCACGCATTCCACTCTGCCTTTGAACGCCGCCCTGTGCAGAGCCGTCCACCCGTTCTGGTCTTTTCCGTTCACTTTCGCTCCCGCCGCTACGCAACTTCTCAGACCTCGAACGTCGCCGGCTCTAGCCGTTCTGTGCAATGCATCGTCTAATCTCAACGAATCGAACAGATCTGTGTGTCCCTTCTCCGACGCGACTGCAAACGCCGTTTTTCCATCGGAATTCACCGCGTATTTCACATTCGAGCAGTTTAGAAGATACTCCACGGCTTCGAGATGTCCTTCCGCTGCCGCGGAATGTAGCGGAGTCCATTTTCTTCGATCCACCGCCTCCGGATCTCCGCCGATCGAAGCGAGAAAACGTATTGCCCCGACGTGA MAINYLQIAIHSANPSSSSSSSSQSSHFPQHIDGISPHTFKSPLKPFNQLRFAPLSSSSPATSSCPASTAHRSGVYPTLSTASASAPCSSSTFTHSTLPLNAALCRAVHPFWSFPFTFAPAATQLLRPRTSPALAVLCNASSNLNESNRSVCPFSDATANAVFPSEFTAYFTFEQFRRYSTASRCPSAAAECSGVHFLRSTASGSPPIEARKRIAPT Homology
BLAST of CaUC09G164300.1 vs. NCBI nr
Match: OCL03996.1 (hypothetical protein AOQ84DRAFT_301704, partial [Glonium stellatum]) HSP 1 Score: 73.6 bits (179), Expect = 2.4e-09 Identity = 60/178 (33.71%), Postives = 82/178 (46.07%), Query Frame = 0
BLAST of CaUC09G164300.1 vs. NCBI nr
Match: KAF2181499.1 (hypothetical protein K469DRAFT_671250, partial [Zopfia rhizophila CBS 207.26]) HSP 1 Score: 60.8 bits (146), Expect = 1.6e-05 Identity = 58/146 (39.73%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of CaUC09G164300.1 vs. NCBI nr
Match: ABT13968.1 (hypothetical protein MT325_m414R [Paramecium bursaria chlorella virus MT325]) HSP 1 Score: 58.9 bits (141), Expect = 6.2e-05 Identity = 54/144 (37.50%), Postives = 60/144 (41.67%), Query Frame = 0
BLAST of CaUC09G164300.1 vs. NCBI nr
Match: KAF2179666.1 (hypothetical protein K469DRAFT_595111, partial [Zopfia rhizophila CBS 207.26]) HSP 1 Score: 57.4 bits (137), Expect = 1.8e-04 Identity = 58/160 (36.25%), Postives = 74/160 (46.25%), Query Frame = 0
BLAST of CaUC09G164300.1 vs. NCBI nr
Match: YP_009701851.1 (hypothetical protein F8205_gp310 [Paramecium bursaria Chlorella virus CVA-1] >AGE50515.1 hypothetical protein PBCVCVA1_476R [Paramecium bursaria Chlorella virus CVA-1]) HSP 1 Score: 55.5 bits (132), Expect = 6.8e-04 Identity = 52/144 (36.11%), Postives = 59/144 (40.97%), Query Frame = 0
BLAST of CaUC09G164300.1 vs. ExPASy TrEMBL
Match: A0A0A9CY52 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.1e-06 Identity = 61/155 (39.35%), Postives = 77/155 (49.68%), Query Frame = 0
BLAST of CaUC09G164300.1 vs. ExPASy TrEMBL
Match: A0A6A6DTF4 (Uncharacterized protein (Fragment) OS=Zopfia rhizophila CBS 207.26 OX=1314779 GN=K469DRAFT_671250 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 7.9e-06 Identity = 58/146 (39.73%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of CaUC09G164300.1 vs. ExPASy TrEMBL
Match: A7IUE4 (Uncharacterized protein m414R OS=Paramecium bursaria Chlorella virus MT325 OX=346932 GN=m414R PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.0e-05 Identity = 54/144 (37.50%), Postives = 60/144 (41.67%), Query Frame = 0
BLAST of CaUC09G164300.1 vs. ExPASy TrEMBL
Match: A0A6A6DPT9 (Uncharacterized protein (Fragment) OS=Zopfia rhizophila CBS 207.26 OX=1314779 GN=K469DRAFT_595111 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 8.7e-05 Identity = 58/160 (36.25%), Postives = 74/160 (46.25%), Query Frame = 0
BLAST of CaUC09G164300.1 vs. ExPASy TrEMBL
Match: M1HVW1 (Uncharacterized protein OS=Paramecium bursaria Chlorella virus CVA-1 OX=42683 GN=CVA-1_476R PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.3e-04 Identity = 52/144 (36.11%), Postives = 59/144 (40.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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