CaUC05G098410.1 (mRNA) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATCGTGTTTATCCTCATTCCAACAAACATGACTTCGTTAAACTCCACAAGGTATTTCCTTATACATGTCAAATTTGTGGCAAGAATTCTGAGGTTGCAGTTCCTTGGTTTTGTAGCATTTGCCATCTTTTCGCACATAAAAACTGCGCGGAGCTACCAGCCATTTTCCATGCGTTTGATCATCGTCATCCTTTGAGTCTCACGTTCTCTGGTCATCGAGTATCTGCAAAATCTGCAATGAAAAGATAA ATGTATCGTGTTTATCCTCATTCCAACAAACATGACTTCGTTAAACTCCACAAGGTATTTCCTTATACATGTCAAATTTGTGGCAAGAATTCTGAGGTTGCAGTTCCTTGGTTTTGTAGCATTTGCCATCTTTTCGCACATAAAAACTGCGCGGAGCTACCAGCCATTTTCCATGCGTTTGATCATCGTCATCCTTTGAGTCTCACGTTCTCTGGTCATCGAGTATCTGCAAAATCTGCAATGAAAAGATAA ATGTATCGTGTTTATCCTCATTCCAACAAACATGACTTCGTTAAACTCCACAAGGTATTTCCTTATACATGTCAAATTTGTGGCAAGAATTCTGAGGTTGCAGTTCCTTGGTTTTGTAGCATTTGCCATCTTTTCGCACATAAAAACTGCGCGGAGCTACCAGCCATTTTCCATGCGTTTGATCATCGTCATCCTTTGAGTCTCACGTTCTCTGGTCATCGAGTATCTGCAAAATCTGCAATGAAAAGATAA MYRVYPHSNKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHPLSLTFSGHRVSAKSAMKR Homology
BLAST of CaUC05G098410.1 vs. NCBI nr
Match: XP_008466555.1 (PREDICTED: uncharacterized protein LOC103503941 [Cucumis melo]) HSP 1 Score: 130.6 bits (327), Expect = 6.4e-27 Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. NCBI nr
Match: XP_031738574.1 (uncharacterized protein LOC101222978 isoform X2 [Cucumis sativus] >KGN60116.2 hypothetical protein Csa_002072 [Cucumis sativus]) HSP 1 Score: 127.9 bits (320), Expect = 4.1e-26 Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. NCBI nr
Match: XP_031738573.1 (uncharacterized protein LOC101222978 isoform X1 [Cucumis sativus]) HSP 1 Score: 127.9 bits (320), Expect = 4.1e-26 Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. NCBI nr
Match: XP_038877874.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120070094 [Benincasa hispida]) HSP 1 Score: 127.1 bits (318), Expect = 7.1e-26 Identity = 53/65 (81.54%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. NCBI nr
Match: KAA0041599.1 (putative Cysteine/Histidine-rich C1 domain family protein [Cucumis melo var. makuwa] >TYK19657.1 putative Cysteine/Histidine-rich C1 domain family protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 1.4e-13 Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. ExPASy TrEMBL
Match: A0A1S3CSU6 (uncharacterized protein LOC103503941 OS=Cucumis melo OX=3656 GN=LOC103503941 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27 Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. ExPASy TrEMBL
Match: A0A0A0LDX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G857580 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26 Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. ExPASy TrEMBL
Match: A0A5A7TJR2 (Putative Cysteine/Histidine-rich C1 domain family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00490 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.7e-14 Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. ExPASy TrEMBL
Match: A0A6J1DNS3 (uncharacterized protein LOC111022774 OS=Momordica charantia OX=3673 GN=LOC111022774 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.4e-13 Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. ExPASy TrEMBL
Match: A0A6J1DQ81 (uncharacterized protein LOC111022535 OS=Momordica charantia OX=3673 GN=LOC111022535 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.4e-10 Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of CaUC05G098410.1 vs. TAIR 10
Match: AT5G01480.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 48.5 bits (114), Expect = 3.0e-06 Identity = 25/61 (40.98%), Postives = 33/61 (54.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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