CaUC05G098410 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G098410
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	DC1 domain-containing family protein
Location	Ciama_Chr05: 29618791 .. 29619042 (-)
RNA-Seq Expression	CaUC05G098410
Synteny	CaUC05G098410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCGTGTTTATCCTCATTCCAACAAACATGACTTCGTTAAACTCCACAAGGTATTTCCTTATACATGTCAAATTTGTGGCAAGAATTCTGAGGTTGCAGTTCCTTGGTTTTGTAGCATTTGCCATCTTTTCGCACATAAAAACTGCGCGGAGCTACCAGCCATTTTCCATGCGTTTGATCATCGTCATCCTTTGAGTCTCACGTTCTCTGGTCATCGAGTATCTGCAAAATCTGCAATGAAAAGATAA

mRNA sequence

ATGTATCGTGTTTATCCTCATTCCAACAAACATGACTTCGTTAAACTCCACAAGGTATTTCCTTATACATGTCAAATTTGTGGCAAGAATTCTGAGGTTGCAGTTCCTTGGTTTTGTAGCATTTGCCATCTTTTCGCACATAAAAACTGCGCGGAGCTACCAGCCATTTTCCATGCGTTTGATCATCGTCATCCTTTGAGTCTCACGTTCTCTGGTCATCGAGTATCTGCAAAATCTGCAATGAAAAGATAA

Coding sequence (CDS)

ATGTATCGTGTTTATCCTCATTCCAACAAACATGACTTCGTTAAACTCCACAAGGTATTTCCTTATACATGTCAAATTTGTGGCAAGAATTCTGAGGTTGCAGTTCCTTGGTTTTGTAGCATTTGCCATCTTTTCGCACATAAAAACTGCGCGGAGCTACCAGCCATTTTCCATGCGTTTGATCATCGTCATCCTTTGAGTCTCACGTTCTCTGGTCATCGAGTATCTGCAAAATCTGCAATGAAAAGATAA

Protein sequence

MYRVYPHSNKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHPLSLTFSGHRVSAKSAMKR

Homology

[Close]

BLAST of CaUC05G098410 vs. NCBI nr
Match: XP_008466555.1 (PREDICTED: uncharacterized protein LOC103503941 [Cucumis melo])

HSP 1 Score: 130.6 bits (327), Expect = 6.4e-27
Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 9   NKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHPLSL 68
           ++HDF+KLHK FPY CQICGKNSE AVPWFCSICHLFAHK+CAE P I H FDHRHPLSL
Sbjct: 245 HQHDFIKLHKAFPYKCQICGKNSESAVPWFCSICHLFAHKSCAEQPTILHTFDHRHPLSL 304

Query: 69  TFSGH 74
           TFSGH
Sbjct: 305 TFSGH 309

[Close]

BLAST of CaUC05G098410 vs. NCBI nr
Match: XP_031738574.1 (uncharacterized protein LOC101222978 isoform X2 [Cucumis sativus] >KGN60116.2 hypothetical protein Csa_002072 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-26
Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 9   NKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHPLSL 68
           ++HDF++LHKVFPY CQICG+NSE AVPWFCSICHLFAHK+CAE P I H FDHRHPLSL
Sbjct: 245 HQHDFIRLHKVFPYKCQICGQNSEPAVPWFCSICHLFAHKSCAEQPTILHTFDHRHPLSL 304

Query: 69  TFSGHR 75
           TFS HR
Sbjct: 305 TFSCHR 310

[Close]

BLAST of CaUC05G098410 vs. NCBI nr
Match: XP_031738573.1 (uncharacterized protein LOC101222978 isoform X1 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-26
Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 9   NKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHPLSL 68
           ++HDF++LHKVFPY CQICG+NSE AVPWFCSICHLFAHK+CAE P I H FDHRHPLSL
Sbjct: 245 HQHDFIRLHKVFPYKCQICGQNSEPAVPWFCSICHLFAHKSCAEQPTILHTFDHRHPLSL 304

Query: 69  TFSGHR 75
           TFS HR
Sbjct: 305 TFSCHR 310

[Close]

BLAST of CaUC05G098410 vs. NCBI nr
Match: XP_038877874.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120070094 [Benincasa hispida])

HSP 1 Score: 127.1 bits (318), Expect = 7.1e-26
Identity = 53/65 (81.54%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 9   NKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHPLSL 68
           ++HDF+KLHKVFPYTCQICGK SE AVPWFCSICHLFAHKNC ELP I H FDH H LSL
Sbjct: 245 HQHDFIKLHKVFPYTCQICGKKSEPAVPWFCSICHLFAHKNCTELPIILHTFDHPHALSL 304

Query: 69  TFSGH 74
           +FSGH
Sbjct: 305 SFSGH 309

[Close]

BLAST of CaUC05G098410 vs. NCBI nr
Match: KAA0041599.1 (putative Cysteine/Histidine-rich C1 domain family protein [Cucumis melo var. makuwa] >TYK19657.1 putative Cysteine/Histidine-rich C1 domain family protein [Cucumis melo var. makuwa])

HSP 1 Score: 86.3 bits (212), Expect = 1.4e-13
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 5   YPHSNKHDFVKLH--KVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDH 64
           + H +   F++ H  K     C +C    + +VPWFCSICHLFAHK+CAE P I H FDH
Sbjct: 133 FTHPHPLTFLQQHWGKNRIVVCSVCQLRIK-SVPWFCSICHLFAHKSCAEQPTILHTFDH 192

Query: 65  RHPLSLTFSGH 74
           RHPLSLTFSGH
Sbjct: 193 RHPLSLTFSGH 202

[Close]

BLAST of CaUC05G098410 vs. ExPASy TrEMBL
Match: A0A1S3CSU6 (uncharacterized protein LOC103503941 OS=Cucumis melo OX=3656 GN=LOC103503941 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27
Identity = 54/65 (83.08%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 9   NKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHPLSL 68
           ++HDF+KLHK FPY CQICGKNSE AVPWFCSICHLFAHK+CAE P I H FDHRHPLSL
Sbjct: 245 HQHDFIKLHKAFPYKCQICGKNSESAVPWFCSICHLFAHKSCAEQPTILHTFDHRHPLSL 304

Query: 69  TFSGH 74
           TFSGH
Sbjct: 305 TFSGH 309

[Close]

BLAST of CaUC05G098410 vs. ExPASy TrEMBL
Match: A0A0A0LDX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G857580 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26
Identity = 53/66 (80.30%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 9   NKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHPLSL 68
           ++HDF++LHKVFPY CQICG+NSE AVPWFCSICHLFAHK+CAE P I H FDHRHPLSL
Sbjct: 245 HQHDFIRLHKVFPYKCQICGQNSEPAVPWFCSICHLFAHKSCAEQPTILHTFDHRHPLSL 304

Query: 69  TFSGHR 75
           TFS HR
Sbjct: 305 TFSCHR 310

[Close]

BLAST of CaUC05G098410 vs. ExPASy TrEMBL
Match: A0A5A7TJR2 (Putative Cysteine/Histidine-rich C1 domain family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00490 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.7e-14
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0


Query: 5   YPHSNKHDFVKLH--KVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDH 64
           + H +   F++ H  K     C +C    + +VPWFCSICHLFAHK+CAE P I H FDH
Sbjct: 133 FTHPHPLTFLQQHWGKNRIVVCSVCQLRIK-SVPWFCSICHLFAHKSCAEQPTILHTFDH 192

Query: 65  RHPLSLTFSGH 74
           RHPLSLTFSGH
Sbjct: 193 RHPLSLTFSGH 202

[Close]

BLAST of CaUC05G098410 vs. ExPASy TrEMBL
Match: A0A6J1DNS3 (uncharacterized protein LOC111022774 OS=Momordica charantia OX=3673 GN=LOC111022774 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.4e-13
Identity = 36/73 (49.32%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 9   NKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHPLSL 68
           ++H F+ L +V  Y CQ CGK SE   PWFC+ICHL AHK CA+LP +    +H H L L
Sbjct: 197 HQHTFLNLRRVLSYDCQACGK-SERGFPWFCNICHLSAHKKCADLPLVLQTSEHCHLLDL 256

Query: 69  TFSGHRVSAKSAM 82
           TFS H++   + M
Sbjct: 257 TFSLHQLGLNNCM 268

[Close]

BLAST of CaUC05G098410 vs. ExPASy TrEMBL
Match: A0A6J1DQ81 (uncharacterized protein LOC111022535 OS=Momordica charantia OX=3673 GN=LOC111022535 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-10
Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 9   NKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDHRHP 66
           ++HDF    K+FPY CQ+CG+      PW+CSIC LFAHK CA L    +  DH HP
Sbjct: 254 HQHDFTNFRKLFPYDCQLCGRPGGDEFPWYCSICQLFAHKKCATLKMSEYDDDHHHP 310

[Close]

BLAST of CaUC05G098410 vs. TAIR 10
Match: AT5G01480.1 (Cysteine/Histidine-rich C1 domain family protein )

HSP 1 Score: 48.5 bits (114), Expect = 3.0e-06
Identity = 25/61 (40.98%), Postives = 33/61 (54.10%), Query Frame = 0


Query: 9   NKHDFVKLHKVFPYTCQICGKNSEVAVPWFCSICHLFAHKNCAELPAIFHAFDH-RHPLS 68
           N+ +   L   F Y CQI     E    +FCS C  + HK C E P++FH+ DH +HPL 
Sbjct: 62  NRKEDKVLSFTFCYVCQI-ALLGEAYYVYFCSYCPNYYHKECVESPSVFHSSDHPKHPLQ 121

The following BLAST results are available for this feature:

BLAST of CaUC05G098410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466555.1	6.4e-27	83.08	PREDICTED: uncharacterized protein LOC103503941 [Cucumis melo]	[more]
XP_031738574.1	4.1e-26	80.30	uncharacterized protein LOC101222978 isoform X2 [Cucumis sativus] >KGN60116.2 hy...	[more]
XP_031738573.1	4.1e-26	80.30	uncharacterized protein LOC101222978 isoform X1 [Cucumis sativus]	[more]
XP_038877874.1	7.1e-26	81.54	LOW QUALITY PROTEIN: uncharacterized protein LOC120070094 [Benincasa hispida]	[more]
KAA0041599.1	1.4e-13	56.34	putative Cysteine/Histidine-rich C1 domain family protein [Cucumis melo var. mak...	[more]

BLAST of CaUC05G098410 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC05G098410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CSU6	3.1e-27	83.08	uncharacterized protein LOC103503941 OS=Cucumis melo OX=3656 GN=LOC103503941 PE=...	[more]
A0A0A0LDX5	2.0e-26	80.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G857580 PE=3 SV=1	[more]
A0A5A7TJR2	6.7e-14	56.34	Putative Cysteine/Histidine-rich C1 domain family protein OS=Cucumis melo var. m...	[more]
A0A6J1DNS3	7.4e-13	49.32	uncharacterized protein LOC111022774 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DQ81	3.4e-10	50.88	uncharacterized protein LOC111022535 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of CaUC05G098410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01480.1	3.0e-06	40.98	Cysteine/Histidine-rich C1 domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SUPERFAMILY	57889	Cysteine-rich domain	coord: 6..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G098410.1	CaUC05G098410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0046872	metal ion binding